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Usage of %pip leads to an error in 4.1.0-1 and newer bundled environment #784

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KTBL-KristofferSchneider opened this issue Feb 28, 2024 · 3 comments
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@KTBL-KristofferSchneider

Description

When using the latest release of jupyterlab-desktop (v4.1.2-1) and creating a new environment based on the bundled environment, %pip will no longer be usable in a code-cell within a notebook. I haven't tested, if this bug persists in older releases as well yet. But the problem was tested (and confirmend) on three different windows 10 devices.

Reproduce

  1. Install the latest release of jupyterlab-desktop following the uninstall/install instructions (v4.1.2-1)
  2. Create a new environment using the bundled one
  3. Activate the just created environment
  4. Create a new notebook
  5. Insert the following command in a code cell: %pip --version
  6. Execute it
  7. Notice the following error:

    Note: you may need to restart the kernel to use updated packages.
    Das System kann den angegebenen Pfad nicht finden.
    (translated to english: The system cannot find the specified path.)

I have set the jupyterlab-desktop logs to debug-level, but could not find any related log messages. Also, the Notebook-execution log (view > show log console) did not show any causes.

Expected behavior

Expected is the correct execution of pip and that the output of the command is displayed in a result cell.

Context

Troubleshoot Output
$PATH:
        C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1
        C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Library\mingw-w64\bin
        C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Library\usr\bin
        C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Library\bin
        C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Scripts
        C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\bin
        C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\condabin
        C:\WINDOWS\system32
        C:\WINDOWS
        C:\WINDOWS\System32\Wbem
        C:\WINDOWS\System32\WindowsPowerShell\v1.0
        C:\WINDOWS\System32\OpenSSH
        C:\JupyterLab

sys.path:
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Scripts
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\python312.zip
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\DLLs
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Lib
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Lib\site-packages
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Lib\site-packages\win32
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Lib\site-packages\win32\lib
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Lib\site-packages\Pythonwin

sys.executable:
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\python.exe

sys.version:
3.12.2 | packaged by conda-forge | (main, Feb 16 2024, 20:42:31) [MSC v.1937 64 bit (AMD64)]

platform.platform():
Windows-10-10.0.19045-SP0

where jupyter:
C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1\Scripts\jupyter.exe

pip list:
Package Version
------------------------- ---------------
anyio 4.3.0
archspec 0.2.2
argon2-cffi 23.1.0
argon2-cffi-bindings 21.2.0
arrow 1.3.0
asttokens 2.4.1
async-lru 2.0.4
attrs 23.2.0
Babel 2.14.0
beautifulsoup4 4.12.3
bleach 6.1.0
boltons 23.1.1
Brotli 1.1.0
cached-property 1.5.2
certifi 2024.2.2
cffi 1.16.0
charset-normalizer 3.3.2
colorama 0.4.6
comm 0.2.1
conda 24.1.1
conda-libmamba-solver 24.1.0
conda-package-handling 2.2.0
conda_package_streaming 0.9.0
contourpy 1.2.0
cycler 0.12.1
debugpy 1.8.1
decorator 5.1.1
defusedxml 0.7.1
distro 1.9.0
entrypoints 0.4
exceptiongroup 1.2.0
executing 2.0.1
fastjsonschema 2.19.1
fonttools 4.49.0
fqdn 1.5.1
h11 0.14.0
h2 4.1.0
hpack 4.0.0
httpcore 1.0.3
httpx 0.26.0
hyperframe 6.0.1
idna 3.6
importlib-metadata 7.0.1
importlib-resources 6.1.1
ipykernel 6.29.2
ipympl 0.9.3
ipython 8.21.0
ipython-genutils 0.2.0
ipywidgets 8.1.2
isoduration 20.11.0
jedi 0.19.1
Jinja2 3.1.3
json5 0.9.17
jsonpatch 1.33
jsonpointer 2.4
jsonschema 4.21.1
jsonschema-specifications 2023.12.1
jupyter_client 8.6.0
jupyter_core 5.7.1
jupyter-events 0.9.0
jupyter-lsp 2.2.2
jupyter_server 2.12.5
jupyter_server_terminals 0.5.2
jupyterlab 4.1.2
jupyterlab_pygments 0.3.0
jupyterlab_server 2.25.3
jupyterlab_widgets 3.0.10
kiwisolver 1.4.5
libmambapy 1.5.6
MarkupSafe 2.1.5
matplotlib 3.8.3
matplotlib-inline 0.1.6
menuinst 2.0.2
mistune 3.0.2
munkres 1.1.4
nbclient 0.8.0
nbconvert 7.16.1
nbformat 5.9.2
nest_asyncio 1.6.0
notebook_shim 0.2.4
numpy 1.26.4
overrides 7.7.0
packaging 23.2
pandas 2.2.0
pandocfilters 1.5.0
parso 0.8.3
pickleshare 0.7.5
pillow 10.2.0
pip 24.0
pkgutil_resolve_name 1.3.10
platformdirs 4.2.0
pluggy 1.4.0
prometheus_client 0.20.0
prompt-toolkit 3.0.42
psutil 5.9.8
pure-eval 0.2.2
pycosat 0.6.6
pycparser 2.21
Pygments 2.17.2
pyparsing 3.1.1
PySocks 1.7.1
python-dateutil 2.8.2
python-json-logger 2.0.7
pytz 2024.1
pywin32 306
pywinpty 2.0.12
PyYAML 6.0.1
pyzmq 25.1.2
referencing 0.33.0
requests 2.31.0
rfc3339-validator 0.1.4
rfc3986-validator 0.1.1
rpds-py 0.18.0
ruamel.yaml 0.18.6
ruamel.yaml.clib 0.2.8
scipy 1.12.0
Send2Trash 1.8.2
setuptools 69.1.0
six 1.16.0
sniffio 1.3.0
soupsieve 2.5
stack-data 0.6.2
terminado 0.18.0
tinycss2 1.2.1
tomli 2.0.1
tornado 6.4
tqdm 4.66.2
traitlets 5.14.1
truststore 0.8.0
types-python-dateutil 2.8.19.20240106
typing_extensions 4.9.0
typing-utils 0.1.0
tzdata 2024.1
uri-template 1.3.0
urllib3 2.2.1
wcwidth 0.2.13
webcolors 1.13
webencodings 0.5.1
websocket-client 1.7.0
wheel 0.42.0
widgetsnbextension 4.0.10
win-inet-pton 1.1.0
zipp 3.17.0
zstandard 0.22.0

conda list:
# packages in environment at C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1:
#
# Name Version Build Channel
anyio 4.3.0 pyhd8ed1ab_0 conda-forge
archspec 0.2.2 pyhd8ed1ab_0 conda-forge
argon2-cffi 23.1.0 pyhd8ed1ab_0 conda-forge
argon2-cffi-bindings 21.2.0 py312he70551f_4 conda-forge
arrow 1.3.0 pyhd8ed1ab_0 conda-forge
asttokens 2.4.1 pyhd8ed1ab_0 conda-forge
async-lru 2.0.4 pyhd8ed1ab_0 conda-forge
attrs 23.2.0 pyh71513ae_0 conda-forge
babel 2.14.0 pyhd8ed1ab_0 conda-forge
beautifulsoup4 4.12.3 pyha770c72_0 conda-forge
bleach 6.1.0 pyhd8ed1ab_0 conda-forge
boltons 23.1.1 pyhd8ed1ab_0 conda-forge
brotli 1.1.0 hcfcfb64_1 conda-forge
brotli-bin 1.1.0 hcfcfb64_1 conda-forge
brotli-python 1.1.0 py312h53d5487_1 conda-forge
bzip2 1.0.8 hcfcfb64_5 conda-forge
ca-certificates 2024.2.2 h56e8100_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
certifi 2024.2.2 pyhd8ed1ab_0 conda-forge
cffi 1.16.0 py312he70551f_0 conda-forge
charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
comm 0.2.1 pyhd8ed1ab_0 conda-forge
conda 24.1.1 py312h2e8e312_0 conda-forge
conda-libmamba-solver 24.1.0 pyhd8ed1ab_0 conda-forge
conda-package-handling 2.2.0 pyh38be061_0 conda-forge
conda-package-streaming 0.9.0 pyhd8ed1ab_0 conda-forge
contourpy 1.2.0 py312h0d7def4_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
debugpy 1.8.1 py312h53d5487_0 conda-forge
decorator 5.1.1 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
distro 1.9.0 pyhd8ed1ab_0 conda-forge
entrypoints 0.4 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.2.0 pyhd8ed1ab_2 conda-forge
executing 2.0.1 pyhd8ed1ab_0 conda-forge
fmt 10.2.1 h181d51b_0 conda-forge
fonttools 4.49.0 py312he70551f_0 conda-forge
fqdn 1.5.1 pyhd8ed1ab_0 conda-forge
freetype 2.12.1 hdaf720e_2 conda-forge
h11 0.14.0 pyhd8ed1ab_0 conda-forge
h2 4.1.0 pyhd8ed1ab_0 conda-forge
hpack 4.0.0 pyh9f0ad1d_0 conda-forge
httpcore 1.0.3 pyhd8ed1ab_0 conda-forge
httpx 0.26.0 pyhd8ed1ab_0 conda-forge
hyperframe 6.0.1 pyhd8ed1ab_0 conda-forge
idna 3.6 pyhd8ed1ab_0 conda-forge
importlib-metadata 7.0.1 pyha770c72_0 conda-forge
importlib_metadata 7.0.1 hd8ed1ab_0 conda-forge
importlib_resources 6.1.1 pyhd8ed1ab_0 conda-forge
intel-openmp 2024.0.0 h57928b3_49841 conda-forge
ipykernel 6.29.2 pyha63f2e9_0 conda-forge
ipympl 0.9.3 pyhd8ed1ab_0 conda-forge
ipython 8.21.0 pyh7428d3b_0 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
ipywidgets 8.1.2 pyhd8ed1ab_0 conda-forge
isoduration 20.11.0 pyhd8ed1ab_0 conda-forge
jedi 0.19.1 pyhd8ed1ab_0 conda-forge
jinja2 3.1.3 pyhd8ed1ab_0 conda-forge
json5 0.9.17 pyhd8ed1ab_0 conda-forge
jsonpatch 1.33 pyhd8ed1ab_0 conda-forge
jsonpointer 2.4 py312h2e8e312_3 conda-forge
jsonschema 4.21.1 pyhd8ed1ab_0 conda-forge
jsonschema-specifications 2023.12.1 pyhd8ed1ab_0 conda-forge
jsonschema-with-format-nongpl 4.21.1 pyhd8ed1ab_0 conda-forge
jupyter-lsp 2.2.2 pyhd8ed1ab_0 conda-forge
jupyter_client 8.6.0 pyhd8ed1ab_0 conda-forge
jupyter_core 5.7.1 py312h2e8e312_0 conda-forge
jupyter_events 0.9.0 pyhd8ed1ab_0 conda-forge
jupyter_server 2.12.5 pyhd8ed1ab_0 conda-forge
jupyter_server_terminals 0.5.2 pyhd8ed1ab_0 conda-forge
jupyterlab 4.1.2 pyhd8ed1ab_0 conda-forge
jupyterlab_pygments 0.3.0 pyhd8ed1ab_1 conda-forge
jupyterlab_server 2.25.3 pyhd8ed1ab_0 conda-forge
jupyterlab_widgets 3.0.10 pyhd8ed1ab_0 conda-forge
kiwisolver 1.4.5 py312h0d7def4_1 conda-forge
krb5 1.21.2 heb0366b_0 conda-forge
lcms2 2.16 h67d730c_0 conda-forge
lerc 4.0.0 h63175ca_0 conda-forge
libarchive 3.7.2 h313118b_1 conda-forge
libblas 3.9.0 21_win64_mkl conda-forge
libbrotlicommon 1.1.0 hcfcfb64_1 conda-forge
libbrotlidec 1.1.0 hcfcfb64_1 conda-forge
libbrotlienc 1.1.0 hcfcfb64_1 conda-forge
libcblas 3.9.0 21_win64_mkl conda-forge
libcurl 8.5.0 hd5e4a3a_0 conda-forge
libdeflate 1.19 hcfcfb64_0 conda-forge
libexpat 2.5.0 h63175ca_1 conda-forge
libffi 3.4.2 h8ffe710_5 conda-forge
libhwloc 2.9.3 default_haede6df_1009 conda-forge
libiconv 1.17 hcfcfb64_2 conda-forge
libjpeg-turbo 3.0.0 hcfcfb64_1 conda-forge
liblapack 3.9.0 21_win64_mkl conda-forge
libmamba 1.5.6 h3f09ed1_0 conda-forge
libmambapy 1.5.6 py312h66cf91f_0 conda-forge
libpng 1.6.42 h19919ed_0 conda-forge
libsodium 1.0.18 h8d14728_1 conda-forge
libsolv 0.7.28 h12be248_0 conda-forge
libsqlite 3.45.1 hcfcfb64_0 conda-forge
libssh2 1.11.0 h7dfc565_0 conda-forge
libtiff 4.6.0 h6e2ebb7_2 conda-forge
libwebp-base 1.3.2 hcfcfb64_0 conda-forge
libxcb 1.15 hcd874cb_0 conda-forge
libxml2 2.12.5 hc3477c8_0 conda-forge
libzlib 1.2.13 hcfcfb64_5 conda-forge
lz4-c 1.9.4 hcfcfb64_0 conda-forge
lzo 2.10 he774522_1000 conda-forge
m2w64-gcc-libgfortran 5.3.0 6 conda-forge
m2w64-gcc-libs 5.3.0 7 conda-forge
m2w64-gcc-libs-core 5.3.0 7 conda-forge
m2w64-gmp 6.1.0 2 conda-forge
m2w64-libwinpthread-git 5.0.0.4634.697f757 2 conda-forge
markupsafe 2.1.5 py312he70551f_0 conda-forge
matplotlib-base 3.8.3 py312h26ecaf7_0 conda-forge
matplotlib-inline 0.1.6 pyhd8ed1ab_0 conda-forge
menuinst 2.0.2 py312h53d5487_0 conda-forge
mistune 3.0.2 pyhd8ed1ab_0 conda-forge
mkl 2024.0.0 h66d3029_49657 conda-forge
msys2-conda-epoch 20160418 1 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
nbclient 0.8.0 pyhd8ed1ab_0 conda-forge
nbconvert-core 7.16.1 pyhd8ed1ab_0 conda-forge
nbformat 5.9.2 pyhd8ed1ab_0 conda-forge
nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge
notebook-shim 0.2.4 pyhd8ed1ab_0 conda-forge
numpy 1.26.4 py312h8753938_0 conda-forge
openjpeg 2.5.0 h3d672ee_3 conda-forge
openssl 3.2.1 hcfcfb64_0 conda-forge
overrides 7.7.0 pyhd8ed1ab_0 conda-forge
packaging 23.2 pyhd8ed1ab_0 conda-forge
pandas 2.2.0 py312h2ab9e98_0 conda-forge
pandocfilters 1.5.0 pyhd8ed1ab_0 conda-forge
parso 0.8.3 pyhd8ed1ab_0 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 10.2.0 py312he768995_0 conda-forge
pip 24.0 pyhd8ed1ab_0 conda-forge
pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge
platformdirs 4.2.0 pyhd8ed1ab_0 conda-forge
pluggy 1.4.0 pyhd8ed1ab_0 conda-forge
prometheus_client 0.20.0 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.42 pyha770c72_0 conda-forge
psutil 5.9.8 py312he70551f_0 conda-forge
pthread-stubs 0.4 hcd874cb_1001 conda-forge
pthreads-win32 2.9.1 hfa6e2cd_3 conda-forge
pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge
pybind11-abi 4 hd8ed1ab_3 conda-forge
pycosat 0.6.6 py312he70551f_0 conda-forge
pycparser 2.21 pyhd8ed1ab_0 conda-forge
pygments 2.17.2 pyhd8ed1ab_0 conda-forge
pyparsing 3.1.1 pyhd8ed1ab_0 conda-forge
pysocks 1.7.1 pyh0701188_6 conda-forge
python 3.12.2 h2628c8c_0_cpython conda-forge
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-fastjsonschema 2.19.1 pyhd8ed1ab_0 conda-forge
python-json-logger 2.0.7 pyhd8ed1ab_0 conda-forge
python-tzdata 2024.1 pyhd8ed1ab_0 conda-forge
python_abi 3.12 4_cp312 conda-forge
pytz 2024.1 pyhd8ed1ab_0 conda-forge
pywin32 306 py312h53d5487_2 conda-forge
pywinpty 2.0.12 py312h53d5487_0 conda-forge
pyyaml 6.0.1 py312he70551f_1 conda-forge
pyzmq 25.1.2 py312h1ac6f91_0 conda-forge
referencing 0.33.0 pyhd8ed1ab_0 conda-forge
reproc 14.2.4.post0 hcfcfb64_1 conda-forge
reproc-cpp 14.2.4.post0 h63175ca_1 conda-forge
requests 2.31.0 pyhd8ed1ab_0 conda-forge
rfc3339-validator 0.1.4 pyhd8ed1ab_0 conda-forge
rfc3986-validator 0.1.1 pyh9f0ad1d_0 conda-forge
rpds-py 0.18.0 py312hfccd98a_0 conda-forge
ruamel.yaml 0.18.6 py312he70551f_0 conda-forge
ruamel.yaml.clib 0.2.8 py312he70551f_0 conda-forge
scipy 1.12.0 py312h8753938_2 conda-forge
send2trash 1.8.2 pyh08f2357_0 conda-forge
setuptools 69.1.0 pyhd8ed1ab_1 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
sniffio 1.3.0 pyhd8ed1ab_0 conda-forge
soupsieve 2.5 pyhd8ed1ab_1 conda-forge
stack_data 0.6.2 pyhd8ed1ab_0 conda-forge
tbb 2021.11.0 h91493d7_1 conda-forge
terminado 0.18.0 pyh5737063_0 conda-forge
tinycss2 1.2.1 pyhd8ed1ab_0 conda-forge
tk 8.6.13 h5226925_1 conda-forge
tomli 2.0.1 pyhd8ed1ab_0 conda-forge
tornado 6.4 py312he70551f_0 conda-forge
tqdm 4.66.2 pyhd8ed1ab_0 conda-forge
traitlets 5.14.1 pyhd8ed1ab_0 conda-forge
truststore 0.8.0 pyhd8ed1ab_0 conda-forge
types-python-dateutil 2.8.19.20240106 pyhd8ed1ab_0 conda-forge
typing-extensions 4.9.0 hd8ed1ab_0 conda-forge
typing_extensions 4.9.0 pyha770c72_0 conda-forge
typing_utils 0.1.0 pyhd8ed1ab_0 conda-forge
tzdata 2024a h0c530f3_0 conda-forge
ucrt 10.0.22621.0 h57928b3_0 conda-forge
uri-template 1.3.0 pyhd8ed1ab_0 conda-forge
urllib3 2.2.1 pyhd8ed1ab_0 conda-forge
vc 14.3 hcf57466_18 conda-forge
vc14_runtime 14.38.33130 h82b7239_18 conda-forge
vs2015_runtime 14.38.33130 hcb4865c_18 conda-forge
wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge
webcolors 1.13 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 pyhd8ed1ab_2 conda-forge
websocket-client 1.7.0 pyhd8ed1ab_0 conda-forge
wheel 0.42.0 pyhd8ed1ab_0 conda-forge
widgetsnbextension 4.0.10 pyhd8ed1ab_0 conda-forge
win_inet_pton 1.1.0 pyhd8ed1ab_6 conda-forge
winpty 0.4.3 4 conda-forge
xorg-libxau 1.0.11 hcd874cb_0 conda-forge
xorg-libxdmcp 1.1.3 hcd874cb_0 conda-forge
xz 5.2.6 h8d14728_0 conda-forge
yaml 0.2.5 h8ffe710_2 conda-forge
yaml-cpp 0.8.0 h63175ca_0 conda-forge
zeromq 4.3.5 h63175ca_0 conda-forge
zipp 3.17.0 pyhd8ed1ab_0 conda-forge
zstandard 0.22.0 py312h01d794b_0 conda-forge
zstd 1.5.5 h12be248_0 conda-forge

conda env:
name: base
channels:
- conda-forge
- defaults
dependencies:
- anyio=4.3.0=pyhd8ed1ab_0
- archspec=0.2.2=pyhd8ed1ab_0
- argon2-cffi=23.1.0=pyhd8ed1ab_0
- argon2-cffi-bindings=21.2.0=py312he70551f_4
- arrow=1.3.0=pyhd8ed1ab_0
- asttokens=2.4.1=pyhd8ed1ab_0
- async-lru=2.0.4=pyhd8ed1ab_0
- attrs=23.2.0=pyh71513ae_0
- babel=2.14.0=pyhd8ed1ab_0
- beautifulsoup4=4.12.3=pyha770c72_0
- bleach=6.1.0=pyhd8ed1ab_0
- boltons=23.1.1=pyhd8ed1ab_0
- brotli=1.1.0=hcfcfb64_1
- brotli-bin=1.1.0=hcfcfb64_1
- brotli-python=1.1.0=py312h53d5487_1
- bzip2=1.0.8=hcfcfb64_5
- ca-certificates=2024.2.2=h56e8100_0
- cached-property=1.5.2=hd8ed1ab_1
- cached_property=1.5.2=pyha770c72_1
- certifi=2024.2.2=pyhd8ed1ab_0
- cffi=1.16.0=py312he70551f_0
- charset-normalizer=3.3.2=pyhd8ed1ab_0
- colorama=0.4.6=pyhd8ed1ab_0
- comm=0.2.1=pyhd8ed1ab_0
- conda=24.1.1=py312h2e8e312_0
- conda-libmamba-solver=24.1.0=pyhd8ed1ab_0
- conda-package-handling=2.2.0=pyh38be061_0
- conda-package-streaming=0.9.0=pyhd8ed1ab_0
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prefix: C:\Users\user\AppData\Roaming\jupyterlab-desktop\envs\env_1

If further information is required, just let me know and I'll try to provide it.

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mbektas commented Feb 28, 2024

@KTBL-KristofferSchneider I was able to reproduce it on Windows, I will be investigating the root cause. In the mean time you can use the terminal to install the packages you need. Please see the instructions here.

@KTBL-KristofferSchneider
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I have further tested, which release started to contain this problem. As far as I have tested it, it seems to start with Version v4.1.0-1. Furthermore, it seems like there are more problems, than a non-working %pip command.

For example: until 4.1.0-1 I used to install perspective using %pip install perspective-python. Since the %pip command does not work, I switched over to the lab-terminal. Apparently the installation fails using v4.1.0-1 and up - but once I switch back to v4.0.12-1 it works again. Another way I tried was to install it via anaconda using conda install -c conda-forge perspective. This leads to a successful installation, but running some example code leads to a crashed jupyter-kernel.

Example-Code

from datetime import date, datetime
import numpy as np
import pandas as pd
import perspective
from perspective import PerspectiveWidget, Table

data = pd.DataFrame({
    "int": np.arange(100),
    "float": [i * 1.5 for i in range(100)],
    "bool": [True for i in range(100)],
    "date": [date.today() for i in range(100)],
    "datetime": [datetime.now() for i in range(100)],
    "string": [str("A" * i) for i in range(100)]
})

table = perspective.Table(data, index="float")
PerspectiveWidget(data)

Once the messagebox has shown the message, that the kernel will be restarted, the following messages appear within the notebook-log:

16:09:35
No such comm target registered: jupyter.widget.control
No such comm: 4120bff6-4f24-48c0-a0a0-48a66cf409bd

Important is to always use the bundled environment. I don't know if the problem using perspective is related to the %pip problem or not.

@KTBL-KristofferSchneider KTBL-KristofferSchneider changed the title Usage of %pip leads to an error in 4.1.2-1 bundled environment Usage of %pip leads to an error in 4.1.0-1 and newer bundled environment Mar 5, 2024
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