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Important Tips
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Important Tips
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1.
Download Putty or use Terminal
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Purge policy exists on /work, see https://hcc-docs.unl.edu/x/4BEF
[demo19@login.crane ~]$ pwd
/home/demo/demo19
[demo19@login.crane ~]$ cd $WORK
[demo19@login.crane demo19]$ pwd
/work/demo/demo19
[demo19@login.crane demo19]$
3.
Sam's Globus Setup Key: 4174b3df-8c33-4347-b50d-8e0eb2fad7ef
Jessica's Globus Key: dffaea8a-3861-46b0-898e-4725c7a57ee7
4.
Common job errors:
slurmstepd: error: Exceeded step memory limit at some point.
The job exceeded the requested memory. Increase memory and resubmit
JOB <jobid> CANCELLED AT <time> DUE TO TIME LIMIT
The job exceeded the requested walltime. Increase time and resubmit.
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squeue -u <Login>
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http://hcc-docs.unl.edu
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Construct analysis with smaller data set, then use full-size data set.
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Data Set Goals: Yield; how well it grows; not genes
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genomes2fields.org
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[demo19@login.crane demo19]$ cd $WORK
[demo19@login.crane demo19]$ cp -r /work/demo/shared/data ./
11.
http://datacommons.cyverse.org/browse/iplant/home/shared/commons_repo/curated/_deprecated_Carolyn_Lawrence_Dill_G2F_Nov_2016_V2