hdfeos5 file is not created

[falkamelung]

When you say mintpy.save.hdfEos5 = yes then I get in the run)9 step this error:

******************** step - hdfeos5 ********************
--------------------------------------------

save_hdfeos5.py /scratch/05861/tg851601/qunittestGalapagosSenDT128/miaplpy/network_single_reference/geo/geo_timeseries_demErr.h5 --tc /scratch/05861/tg851601/qunittestGalapagosSenDT128/miaplpy/network_single_reference/geo/geo_temporalCoherence.h5 --asc /scratch/05861/tg851601/qunittestGalapagosSenDT128/miaplpy/network_single_reference/geo/geo_avgSpatialCoh.h5 -m /scratch/05861/tg851601/qunittestGalapagosSenDT128/miaplpy/network_single_reference/geo/geo_maskTempCoh.h5 -g /scratch/05861/tg851601/qunittestGalapagosSenDT128/miaplpy/network_single_reference/geo/geo_geometryRadar.h5 -t /scratch/05861/tg851601/qunittestGalapagosSenDT128/miaplpy/network_single_reference/smallbaselineApp.cfg
read options from template file: smallbaselineApp.cfg
Traceback (most recent call last):
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/cli/smallbaselineApp.py", line 213, in <module>
    main(sys.argv[1:])
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/cli/smallbaselineApp.py", line 208, in main
    run_smallbaselineApp(inps)
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/smallbaselineApp.py", line 1117, in run_smallbaselineApp
    app.run(steps=inps.runSteps)
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/smallbaselineApp.py", line 922, in run
    self.run_save2hdfeos5(sname)
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/smallbaselineApp.py", line 862, in run_save2hdfeos5
    mintpy.cli.save_hdfeos5.main(iargs)
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/cli/save_hdfeos5.py", line 107, in main
    save_hdfeos5(inps)
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/save_hdfeos5.py", line 437, in save_hdfeos5
    meta = prep_metadata(
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/save_hdfeos5.py", line 64, in prep_metadata
    unavco_meta = metadata_mintpy2unavco(meta, ts_obj.dateList, geom_file)
  File "/work2/05861/tg851601/stampede2/code/rsmas_insar/sources/MintPy/mintpy/save_hdfeos5.py", line 118, in metadata_mintpy2unavco
    lons = [meta['LON_REF1'],
KeyError: 'LON_REF1'
Go back to directory: /scratch/05861/tg851601/qunittestGalapagosSenDT128/miaplpy

MintPy does not throw this error.
It turns out that the data.rsc lacks the fields LAT_REF1, etc, whereas the data.rsc generated by mintpy has them:

qunittestGalapagosSenDT128/reference[1089] sdiff data.rsc ../reference_mintpy/data.rsc 
ALOOKS                1					      |	ALOOKS                    5
ANTENNA_SIDE          -1				      |	ANTENNA_SIDE              -1
AZIMUTH_PIXEL_SIZE    15.616065431619585		      |	AZIMUTH_PIXEL_SIZE        78.08032715809793
CENTER_LINE_UTC       42609.0				      |	CENTER_INCIDENCE_ANGLE    33.853077
EARTH_RADIUS          6337323.067122917			      |	CENTER_LINE_UTC           42609.0
HEADING               -167.96908041323653		      |	EARTH_RADIUS              6337323.067122917
HEIGHT                698984.5823960749			      |	FILE_LENGTH               565
NCORRLOOKS            0.5988245993484209		      |	HEADING                   -167.96908041323653
ORBIT_DIRECTION       DESCENDING			      |	HEIGHT                    698984.5823960749
PLATFORM              sen				      |	LAT_REF1                  -0.6879028124910035
POLARIZATION          VV				      |	LAT_REF2                  -0.5250735971614573
PRF                   1717.128973878037			      |	LAT_REF3                  -1.0360017147852283
PROCESSOR             isce				      |	LAT_REF4                  -0.8728346561708716
RANGE_PIXEL_SIZE      2.329562114715323			      |	LENGTH                    565
RLOOKS                1					      |	LON_REF1                  -90.79578040798087
STARTING_RANGE        799547.2189154713			      |	LON_REF2                  -91.55101356159743
WAVELENGTH            0.05546576			      |	LON_REF3                  -90.86902369155685
altitude              698984.5823960749			      |	LON_REF4                  -91.62443101326208
azimuthPixelSize      15.616065431619585		      |	NCORRLOOKS                44.91184495113157
azimuthResolution     22.5				      |	ORBIT_DIRECTION           DESCENDING

The problem is at follows:

LON_REF1, etc is read from the .xml file here. However, the extract_geometry_metadata function is never reached, because it thinks that there are no geom_files. It checks for the existence of e.g. lat.rdr.full here. But the file does not exist. Only lat.rdr.full.vrt exists.

I hope there is an easy fix??