{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":45548146,"defaultBranch":"master","name":"gnina","ownerLogin":"gnina","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2015-11-04T15:29:17.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/15654234?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1707591926.0","currentOid":""},"activityList":{"items":[{"before":"699c0fcfe4a55fed5d27eab23eacea0aa0cfab98","after":"0a946bb3ecbe0e410cff8b883a8a82cbf9026f08","ref":"refs/heads/master","pushedAt":"2024-05-15T18:22:46.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Update ubuntu 22.04 dockerfile","shortMessageHtmlLink":"Update ubuntu 22.04 dockerfile"}},{"before":"cef9693194affcbc9570096c33e4a93fdab09764","after":"699c0fcfe4a55fed5d27eab23eacea0aa0cfab98","ref":"refs/heads/master","pushedAt":"2024-05-06T17:49:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Better behaved covalent min/scoring\n\nDon't reposition ligand in these cases. Adjust box to only be defined\nby moving atoms.","shortMessageHtmlLink":"Better behaved covalent min/scoring"}},{"before":"7464e51e19ada82b88c2596ee583d8e10b5011ba","after":"cef9693194affcbc9570096c33e4a93fdab09764","ref":"refs/heads/master","pushedAt":"2024-05-03T19:28:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"refine warning","shortMessageHtmlLink":"refine warning"}},{"before":"43e0ba925e46e0a2e11990b417ce768d24cd9cb5","after":"7464e51e19ada82b88c2596ee583d8e10b5011ba","ref":"refs/heads/master","pushedAt":"2024-05-03T17:41:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"tweak fix","shortMessageHtmlLink":"tweak fix"}},{"before":"1dd8ce99260d8e3b0a43baa445fda68b7d62e469","after":"43e0ba925e46e0a2e11990b417ce768d24cd9cb5","ref":"refs/heads/master","pushedAt":"2024-05-03T17:30:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Skip the numerical check\n\nPunt and normalize angle to zero. Also reformated.","shortMessageHtmlLink":"Skip the numerical check"}},{"before":"80513cfe58fc46ae91c66236eda1db3c93e94c2d","after":"1dd8ce99260d8e3b0a43baa445fda68b7d62e469","ref":"refs/heads/master","pushedAt":"2024-05-01T21:01:11.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"cmake foo","shortMessageHtmlLink":"cmake foo"}},{"before":"20ad958ceb4e6c0dff2d47becfc880443428e061","after":"80513cfe58fc46ae91c66236eda1db3c93e94c2d","ref":"refs/heads/master","pushedAt":"2024-04-29T21:09:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"all the torch libs!","shortMessageHtmlLink":"all the torch libs!"}},{"before":"6ce607dadb9f05ee3563bb781549fa73608ea9bd","after":"20ad958ceb4e6c0dff2d47becfc880443428e061","ref":"refs/heads/master","pushedAt":"2024-04-24T21:01:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Add default1.0 option.","shortMessageHtmlLink":"Add default1.0 option."}},{"before":"d7f922bbf0a0bdc95ef4be45944fb25da014e17e","after":"6ce607dadb9f05ee3563bb781549fa73608ea9bd","ref":"refs/heads/master","pushedAt":"2024-04-24T16:20:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Need a newer version of cmake than what was checked.","shortMessageHtmlLink":"Need a newer version of cmake than what was checked."}},{"before":"e9ba5c1d531b580d7c96c3357911740ca161fd6f","after":"d7f922bbf0a0bdc95ef4be45944fb25da014e17e","ref":"refs/heads/master","pushedAt":"2024-04-23T21:28:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"New default models (in torch only) along with fast model shortcut.","shortMessageHtmlLink":"New default models (in torch only) along with fast model shortcut."}},{"before":"278b4510ecd1d42e1c098e84ed2f8c53c1702128","after":"e9ba5c1d531b580d7c96c3357911740ca161fd6f","ref":"refs/heads/master","pushedAt":"2024-03-28T19:27:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"another try","shortMessageHtmlLink":"another try"}},{"before":"625e1c384705a8d77491fbbcaa8f689bb911ec3d","after":"278b4510ecd1d42e1c098e84ed2f8c53c1702128","ref":"refs/heads/master","pushedAt":"2024-03-28T18:32:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"more complete file list","shortMessageHtmlLink":"more complete file list"}},{"before":"836de57faeecd0cb6f9fbb8c9f83e305c3ab6bb1","after":"625e1c384705a8d77491fbbcaa8f689bb911ec3d","ref":"refs/heads/master","pushedAt":"2024-03-28T18:05:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"attempt to fix install\n\nNeed a variety of torch libraries and the static versions don't seem to\nbe being built.","shortMessageHtmlLink":"attempt to fix install"}},{"before":"1082e64e65de8ece2f0c3c1be7792b13123d8459","after":"836de57faeecd0cb6f9fbb8c9f83e305c3ab6bb1","ref":"refs/heads/master","pushedAt":"2024-03-22T11:59:21.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"update dockerfile","shortMessageHtmlLink":"update dockerfile"}},{"before":"ad53491545923bd2a005c1322f89b81412edd484","after":"1082e64e65de8ece2f0c3c1be7792b13123d8459","ref":"refs/heads/master","pushedAt":"2024-03-16T14:47:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"6526e95499bc62a8636efa97b4b917e3215d1b02","after":"ad53491545923bd2a005c1322f89b81412edd484","ref":"refs/heads/master","pushedAt":"2024-03-10T18:10:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"No apt update in CI","shortMessageHtmlLink":"No apt update in CI"}},{"before":"a45e1232d4fbf4439f5249dc0465382cf1a39e36","after":"6526e95499bc62a8636efa97b4b917e3215d1b02","ref":"refs/heads/master","pushedAt":"2024-03-02T20:59:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"json include correct","shortMessageHtmlLink":"json include correct"}},{"before":"c253dff32e5f6941053a03f43a3c657d3891ee73","after":"a45e1232d4fbf4439f5249dc0465382cf1a39e36","ref":"refs/heads/master","pushedAt":"2024-03-02T20:01:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"add libmolgrid dep\n\nso things parallel build correctly","shortMessageHtmlLink":"add libmolgrid dep"}},{"before":"54dcb7372c72a8a2e136789384cd940d881a8ba8","after":"c253dff32e5f6941053a03f43a3c657d3891ee73","ref":"refs/heads/master","pushedAt":"2024-03-02T18:49:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Update CI\n\nDon't upgrade drivers","shortMessageHtmlLink":"Update CI"}},{"before":"55d8c7b1faaed86762072642b0afc4d88aa092b8","after":"54dcb7372c72a8a2e136789384cd940d881a8ba8","ref":"refs/heads/master","pushedAt":"2024-03-02T16:40:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"100% tests passed","shortMessageHtmlLink":"100% tests passed"}},{"before":"007e45c04fe9807eefd66c7120399db47db74aaa","after":"55d8c7b1faaed86762072642b0afc4d88aa092b8","ref":"refs/heads/master","pushedAt":"2024-03-01T22:46:07.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Checkpoint gnina torch fixes.\n\nStill issues with flexible docking and who knows what else","shortMessageHtmlLink":"Checkpoint gnina torch fixes."}},{"before":"ce5333c8f92eea4bc1a8bf58636b0e9252b219b8","after":"007e45c04fe9807eefd66c7120399db47db74aaa","ref":"refs/heads/master","pushedAt":"2024-02-26T22:29:52.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"backprop","shortMessageHtmlLink":"backprop"}},{"before":"893957cfa056f59693cec5154c1485f8291b5541","after":"007e45c04fe9807eefd66c7120399db47db74aaa","ref":"refs/heads/torch","pushedAt":"2024-02-26T22:16:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"backprop","shortMessageHtmlLink":"backprop"}},{"before":"f8a63b8e540ab58490fcda3d620925bf92b04b6f","after":"893957cfa056f59693cec5154c1485f8291b5541","ref":"refs/heads/torch","pushedAt":"2024-02-26T16:21:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Get builtin models working with torch","shortMessageHtmlLink":"Get builtin models working with torch"}},{"before":"dba3b31004637e0e464ea9063085af1c710986cb","after":"f8a63b8e540ab58490fcda3d620925bf92b04b6f","ref":"refs/heads/torch","pushedAt":"2024-02-25T01:54:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Checkpoint torch scoring. Forward works.","shortMessageHtmlLink":"Checkpoint torch scoring. Forward works."}},{"before":null,"after":"dba3b31004637e0e464ea9063085af1c710986cb","ref":"refs/heads/torch","pushedAt":"2024-02-10T19:05:26.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Link with torch","shortMessageHtmlLink":"Link with torch"}},{"before":"e4cb380c450d6d258c9953d865ab8f3b1f23e057","after":"ce5333c8f92eea4bc1a8bf58636b0e9252b219b8","ref":"refs/heads/master","pushedAt":"2023-12-20T16:39:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Update dockerfile for cov","shortMessageHtmlLink":"Update dockerfile for cov"}},{"before":"617ee3b4f5fb7fcbc4bbb74ded1df14409d5d2d8","after":"e4cb380c450d6d258c9953d865ab8f3b1f23e057","ref":"refs/heads/master","pushedAt":"2023-12-18T19:46:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Update README to reflect covalent docking","shortMessageHtmlLink":"Update README to reflect covalent docking"}},{"before":"31037e33323f6877310198fd42800df9a53724fa","after":"617ee3b4f5fb7fcbc4bbb74ded1df14409d5d2d8","ref":"refs/heads/master","pushedAt":"2023-11-21T16:21:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"Covalent improvements\n\nBetter bond vectors for HEME. Remove atom optimization since it isn't\nvery good.","shortMessageHtmlLink":"Covalent improvements"}},{"before":"c747a3a7210eff1343845991abab7b1de353ef15","after":"31037e33323f6877310198fd42800df9a53724fa","ref":"refs/heads/master","pushedAt":"2023-11-17T14:55:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dkoes","name":"David Koes","path":"/dkoes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2342142?s=80&v=4"},"commit":{"message":"update error message test","shortMessageHtmlLink":"update error message test"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEStxZbAA","startCursor":null,"endCursor":null}},"title":"Activity ยท gnina/gnina"}