Pipfile

[[source]]
url = "https://pypi.org/simple"
verify_ssl = true
name = "pypi"

[packages]
numpy = ">=1.24.3"
pandas = ">=2.0.3"
scipy = ">=1.11.1"
matplotlib = ">=3.7.2"
seaborn = ">=0.12.2"
plotly = ">=5.9.0"
scikit-learn = ">=1.3.0"
tqdm = ">=4.65.0"
joblib = ">=1.2.0"
ipyparallel = ">=8.4.1"
requests = ">=2.31.0"
loguru = ">=0.5.3"
networkx = ">=3.1"
jsonpickle = ">=2.2.0"
statsmodels = ">=0.14.0"
tabulate = ">=0.8.10"
intervaltree = ">=3.1.0"
events = ">=0.5"
pymzml = ">=2.4.7"
psims = ">=1.2.7"
mass-spec-utils = ">=0.0.12"
pysmiles = ">=1.1.2"
numba = ">=0.57.1"
numba-stats = ">=1.3.0"
ms-deisotope = ">=0.0.53"
optuna = ">=3.3.0"
# gpy = ">=1.10.0"
# kaleido = ">=0.2.1"

[dev-packages]
jupyterlab = ">=3.6.3"
ipywidgets = ">=8.0.4"
flake8 = ">=6.0.0"
autopep8 = ">=1.6.0"
pytest = ">=7.4.0"
pytest-cov = ">=4.1.0"
mkdocs = ">=1.5.3"
mkdocstrings = ">=0.23.0"

[requires]
python_version = "3.10"