2. BioPortal (valid).ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "import sys\n",
    "# !{sys.executable} -m pip install tldextract"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<div style='text-align:center;'>\n",
    "<h1>BioPortal</h1>\n",
    "<h2>Valid requests</h2>\n",
    "</div>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 58,
   "metadata": {},
   "outputs": [],
   "source": [
    "__author__ = \"Lisette Espin-Noboa\"\n",
    "__copyright__ = \"Copyright 2018, HopRank\"\n",
    "__credits__ = [\"Florian Lemmerich\", \"Markus Strohmaier\", \"Simon Walk\", \"Mark Musen\"]\n",
    "__license__ = \"GPL\"\n",
    "__version__ = \"1.0.3\"\n",
    "__maintainer__ = \"Lisette Espin-Noboa\"\n",
    "__email__ = \"Lisette.Espin@gesis.org\"\n",
    "__status__ = \"Developing\"\n",
    "\n",
    "########################################################################################\n",
    "# Warnings\n",
    "########################################################################################\n",
    "import warnings\n",
    "warnings.filterwarnings(\"ignore\", message=\"numpy.dtype size changed\")\n",
    "warnings.filterwarnings(\"ignore\", message=\"numpy.ufunc size changed\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h2>Dependencies</h2>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 95,
   "metadata": {},
   "outputs": [],
   "source": [
    "########################################################################################\n",
    "# System\n",
    "########################################################################################\n",
    "import os\n",
    "import importlib\n",
    "import numpy as np\n",
    "import pandas as pd\n",
    "import seaborn as sns\n",
    "import networkx as nx\n",
    "from collections import Counter\n",
    "from joblib import Parallel, delayed\n",
    "import matplotlib as mpl\n",
    "import matplotlib.pyplot as plt \n",
    "from collections import defaultdict\n",
    "\n",
    "########################################################################################\n",
    "# Local Dependencies\n",
    "########################################################################################\n",
    "%reload_ext autoreload\n",
    "%autoreload 2\n",
    "from org.gesis.libs.bioportal.ontology import Ontology\n",
    "from org.gesis.libs.bioportal.transition import Transition\n",
    "from org.gesis.libs.bioportal.clickstream import NAVITYPES\n",
    "from org.gesis.libs.bioportal.clickstream import load_clickstream\n",
    "from org.gesis.libs.bioportal.clickstream import preprocess_clickstream\n",
    "from org.gesis.libs.bioportal.clickstream import preprocess_sessions\n",
    "from org.gesis.libs.bioportal.clickstream import clean_clickstream\n",
    "from org.gesis.libs.bioportal.submission import get_submissions\n",
    "from org.gesis.libs.utils import log\n",
    "from org.gesis.libs.utils import weighted_to_undirected\n",
    "from org.gesis.libs.utils import to_symmetric\n",
    "\n",
    "########################################################################################\n",
    "# Plot's style\n",
    "########################################################################################\n",
    "sns.set_context(context=\"paper\", font_scale=1.5)\n",
    "sns.set_style(\"whitegrid\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h2>Constants</h2>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 60,
   "metadata": {},
   "outputs": [],
   "source": [
    "SM = 'submission'\n",
    "SUBMISSIONS_FN = '/bigdata/lespin/datasets/bioportal/submissions.json'\n",
    "\n",
    "ON = 'ontology'\n",
    "ONTOLOGY_ROOT = '/bigdata/lespin/datasets/bioportal/ontologies'\n",
    "ONTOLOGY_GRAPH_OUTPUT = '/bigdata/lespin/bioportal/ontologies/graph'\n",
    "ONTOLOGY_ADJACENCY_OUTPUT = '/bigdata/lespin/bioportal/ontologies/matrix'\n",
    "ONTOLOGY_NODES_OUTPUT = '/bigdata/lespin/bioportal/ontologies/nodes'\n",
    "ONTOLOGY_HOPS_OUTPUT = '/bigdata/lespin/bioportal/ontologies/hops'\n",
    "\n",
    "CS = 'clickstream'\n",
    "CS_FN = 'BP_webpage_requests_<YEAR><POSTFIX>.csv.bz2'\n",
    "CLICKSTREAM_ROOT = '/bigdata/lespin/datasets/bioportal/clickstream/'\n",
    "CLICKSTREAM_DF = '/bigdata/lespin/bioportal/clickstreams'\n",
    "\n",
    "TR = 'transitions'\n",
    "TRANS_GRAPH_OUTPUT = '/bigdata/lespin/bioportal/transitions/graph'\n",
    "TRANS_ADJACENCY_OUTPUT = '/bigdata/lespin/bioportal/transitions/matrix'\n",
    "TRANS_NODES_OUTPUT = '/bigdata/lespin/bioportal/transitions/nodes'\n",
    "LCC_TRANS_GRAPH_OUTPUT = '/bigdata/lespin/bioportal/transitions_in_lcc/graph'\n",
    "LCC_TRANS_ADJACENCY_OUTPUT = '/bigdata/lespin/bioportal/transitions_in_lcc/matrix'\n",
    "LCC_TRANS_NODES_OUTPUT = '/bigdata/lespin/bioportal/transitions_in_lcc/nodes'\n",
    "\n",
    "SU = 'summary'\n",
    "LOG_OUTPUT = '/bigdata/lespin/bioportal/logs'\n",
    "PLOTS_OUTPUT = '/bigdata/lespin/bioportal/plots'\n",
    "SUMMARY_OUTPUT = '/bigdata/lespin/bioportal/summary'\n",
    "YEAR = '2015'\n",
    "\n",
    "LAG_BREAK_IN_MINUTES = 60\n",
    "MIN_SESSION_LENGTH = 2\n",
    "MIN_REQ = 1000\n",
    "MIN_TRANSITIONS = 1000"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h2>Functions</h2>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 98,
   "metadata": {},
   "outputs": [],
   "source": [
    "def plot_transitions_per_navitype(clickstreams, transitions, navitypes, fn):\n",
    "    tmp = {}\n",
    "    tmp['navitype'] = navitypes\n",
    "    tmp['ntransitions'] = [transitions[navitype] for navitype in navitypes]\n",
    "    tmp = pd.DataFrame(tmp)\n",
    "    ax = sns.barplot(x='navitype',y='ntransitions',\n",
    "                       data=tmp,\n",
    "                       order=clickstreams['_navitype'].value_counts().index)\n",
    "    ax.set_yscale('log')\n",
    "    _ = ax.set_xticklabels(ax.get_xticklabels(), rotation=90)\n",
    "    ax.set_title('Distribution of Transitions per Navigation Type')\n",
    "    _ = ax.set_ylabel('# transitions')\n",
    "    _ = ax.set_xlabel('navigation type')\n",
    "    try:\n",
    "        id = round(tmp.navitype.nunique()/2.)-1\n",
    "        ax.text( id, tmp.loc[id,'ntransitions'], '{:,} (valid) transitions'.format(int(transitions[None])))\n",
    "    except Exception as ex:\n",
    "        print(ex)\n",
    "        pass\n",
    "\n",
    "    plt.tight_layout()\n",
    "    plt.savefig(fn, bbox_inches='tight')\n",
    "    \n",
    "def plot_transitions_per_ontology_and_navitype(df, values, onto_order, width=7.8, height=5, fn=None):\n",
    "    sns.set_style(\"ticks\", {\"xtick.major.size\": 8, \"ytick.major.size\": 8, \n",
    "                            'xtick.color': 'black', 'ytick.color': 'black',\n",
    "                           'axes.edgecolor': 'black'})\n",
    "    \n",
    "    navitypes_order = ['DE','DC','DU','EX','EL','ES','LS']\n",
    "    tmp = df.pivot(columns='ontology',\n",
    "                   index='navitype',\n",
    "                   values=values).fillna(0).reindex(index = navitypes_order)[onto_order]\n",
    "    ax = tmp.divide(tmp.sum(axis=0),axis=1).T.plot.bar(stacked=True, linewidth=0.0, figsize=(width,height))\n",
    "    _ = ax.legend(frameon=False, bbox_to_anchor=(1.01,0.5), loc=\"center left\", borderaxespad=0, title='navitype')\n",
    "    ax.grid(False)\n",
    "    plt.tight_layout()\n",
    "    if fn is not None:\n",
    "        plt.savefig(fn, bbox_inches='tight')\n",
    "    plt.show()\n",
    "    plt.close()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<div style='text-align:center;'>\n",
    "<h1>Submissions</h1>\n",
    "</div>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [],
   "source": [
    "%%capture cap --no-stderr\n",
    "submissions_dict = get_submissions(SUBMISSIONS_FN)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "2019-02-20 14:17:34\t/bigdata/lespin/datasets/bioportal/submissions.json loaded!\n",
      "2019-02-20 14:17:34\t- 642 ontologies\n",
      "2019-02-20 14:17:34\t- 13 years\n",
      "\n",
      "2019-02-20 14:17:34\t/bigdata/lespin/bioportal/logs/submission_2019-02-20_14.log saved!\n"
     ]
    }
   ],
   "source": [
    "print(cap.stdout)\n",
    "log(LOG_OUTPUT, SM, cap)\n",
    "del(cap)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<div style='text-align:center;'>\n",
    "<h1>Clickstreams</h1>\n",
    "</div>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "loading...\n",
      "/bigdata/lespin/bioportal/clickstreams/BP_webpage_requests_2015_parsed_sessions_prevalid.csv.bz2 loaded!\n"
     ]
    }
   ],
   "source": [
    "fn = CS_FN.replace('<YEAR>',YEAR).replace('<POSTFIX>','_parsed_sessions_prevalid')\n",
    "fn = os.path.join(CLICKSTREAM_DF,fn)\n",
    "if os.path.exists(fn):\n",
    "    print('loading...')\n",
    "    valid_clickstreams = pd.read_csv(fn, compression='bz2')\n",
    "    print('{} loaded!'.format(fn))\n",
    "else:\n",
    "    print('{} does NOT exist!'.format(fn))"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<div style='text-align:center;'>\n",
    "<h1>Ontology</h1>\n",
    "</div>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 9,
   "metadata": {},
   "outputs": [],
   "source": [
    "%%capture cap --no-stderr\n",
    "onto_name = 'CPT'\n",
    "submission = submissions_dict[onto_name][YEAR]\n",
    "onto = Ontology(name=onto_name, year=YEAR, submission_id=submission['submissionId'], root_folder=ONTOLOGY_ROOT)\n",
    "onto.load_ontology()\n",
    "onto.create_adjacency_matrix()\n",
    "onto.create_adjacency_matrix(lcc=True)\n",
    "onto.save_graph(path=ONTOLOGY_GRAPH_OUTPUT)\n",
    "onto.save_adjacency(path=ONTOLOGY_ADJACENCY_OUTPUT)\n",
    "onto.save_adjacency(path=ONTOLOGY_ADJACENCY_OUTPUT, lcc=True)\n",
    "onto.save_nodes(path=ONTOLOGY_NODES_OUTPUT)\n",
    "onto.save_nodes(path=ONTOLOGY_NODES_OUTPUT, lcc=True)\n",
    "print(onto.A.shape)\n",
    "print(onto.lcc_A.shape)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 10,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "2019-02-12 21:55:46\t/bigdata/lespin/datasets/bioportal/ontologies/CPT/6/CPT.csv.gz loaded!\n",
      "2019-02-12 21:55:49\tConvertion CPT-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 21:55:51\t/bigdata/lespin/bioportal/ontologies/graph/CPT_2015.gpickle saved!\n",
      "2019-02-12 21:55:51\t/bigdata/lespin/bioportal/ontologies/matrix/CPT_2015.npz saved!\n",
      "2019-02-12 21:55:51\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_CPT_2015.npz saved!\n",
      "2019-02-12 21:55:51\t/bigdata/lespin/bioportal/ontologies/nodes/CPT_2015.csv saved!\n",
      "2019-02-12 21:55:51\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_CPT_2015.csv saved!\n",
      "(13219, 13219)\n",
      "(13092, 13092)\n",
      "\n",
      "2019-02-12 21:55:51\t/bigdata/lespin/bioportal/logs/ontology_2019-02-12_21.log saved!\n"
     ]
    }
   ],
   "source": [
    "print(cap.stdout)\n",
    "log(LOG_OUTPUT, ON, cap)\n",
    "del(cap)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<div style='text-align:center;'>\n",
    "<h1>Transitions by Ontology (LCC)</h1>\n",
    "</div>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 11,
   "metadata": {},
   "outputs": [],
   "source": [
    "%%capture cap --no-stderr\n",
    "navitype = None\n",
    "\n",
    "# all transitions\n",
    "cs = Transition(onto_name, navitype, YEAR)\n",
    "cs.load_clickstream_and_validate(valid_clickstreams,onto.sorted_nodes,MIN_SESSION_LENGTH)\n",
    "cs.create_adjacency_matrix(sorted_nodes=onto.sorted_nodes)\n",
    "cs.save_graph(path=TRANS_GRAPH_OUTPUT)\n",
    "cs.save_adjacency(path=TRANS_ADJACENCY_OUTPUT)\n",
    "cs.save_nodes(path=TRANS_NODES_OUTPUT)\n",
    "print(nx.info(cs.H))\n",
    "print(cs.H.size(weight='weight'))\n",
    "print(cs.T.shape)\n",
    "\n",
    "# LCC transitions\n",
    "cs = Transition(onto_name, navitype, YEAR)\n",
    "cs.load_clickstream_and_validate(valid_clickstreams,onto.lcc_sorted_nodes,MIN_SESSION_LENGTH)\n",
    "cs.create_adjacency_matrix(sorted_nodes=onto.lcc_sorted_nodes)\n",
    "cs.save_graph(path=LCC_TRANS_GRAPH_OUTPUT)\n",
    "cs.save_adjacency(path=LCC_TRANS_ADJACENCY_OUTPUT)\n",
    "cs.save_nodes(path=LCC_TRANS_NODES_OUTPUT)\n",
    "print(nx.info(cs.H))\n",
    "print(cs.H.size(weight='weight'))\n",
    "print(cs.T.shape)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 12,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "2019-02-12 21:56:41\tCPT-2015-None: 10231 concepts found, but 10075 kept (cros-val)\n",
      "2019-02-12 21:56:42\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_ALL.gpickle saved!\n",
      "2019-02-12 21:56:42\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_ALL.npz saved!\n",
      "2019-02-12 21:56:42\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_ALL.csv saved!\n",
      "Name: \n",
      "Type: DiGraph\n",
      "Number of nodes: 10075\n",
      "Number of edges: 33140\n",
      "Average in degree:   3.2893\n",
      "Average out degree:   3.2893\n",
      "44815.0\n",
      "(13219, 13219)\n",
      "2019-02-12 21:57:33\tCPT-2015-None: 10231 concepts found, but 10058 kept (cros-val)\n",
      "2019-02-12 21:57:34\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_ALL.gpickle saved!\n",
      "2019-02-12 21:57:34\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_ALL.npz saved!\n",
      "2019-02-12 21:57:34\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_ALL.csv saved!\n",
      "Name: \n",
      "Type: DiGraph\n",
      "Number of nodes: 10058\n",
      "Number of edges: 32987\n",
      "Average in degree:   3.2797\n",
      "Average out degree:   3.2797\n",
      "44651.0\n",
      "(13092, 13092)\n",
      "\n",
      "2019-02-12 21:57:34\t/bigdata/lespin/bioportal/logs/transitions_2019-02-12_21.log saved!\n"
     ]
    }
   ],
   "source": [
    "print(cap.stdout)\n",
    "log(LOG_OUTPUT, TR, cap)\n",
    "del(cap)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<div style='text-align:center; color:red;'>\n",
    "<h1>Valid Ontologies & Transitions</h1>\n",
    "<h2>Cross-validation</h2>\n",
    "</div>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "67 valid ontologies\n",
      "(1209220, 21) valid requests\n"
     ]
    }
   ],
   "source": [
    "valid_ontologies_clickstream = valid_clickstreams.groupby('_ontology').filter(lambda x: len(x) >= MIN_REQ)\n",
    "print('{} valid ontologies'.format(valid_ontologies_clickstream._ontology.nunique()))\n",
    "print('{} valid requests'.format(valid_ontologies_clickstream.shape))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 14,
   "metadata": {
    "scrolled": true
   },
   "outputs": [],
   "source": [
    "%%capture cap --no-stderr\n",
    "\n",
    "all_transitions = defaultdict(lambda:0)\n",
    "lcc_transitions = defaultdict(lambda:0)\n",
    "\n",
    "for onto_name in valid_ontologies_clickstream._ontology.unique():\n",
    "    ### Onotlogy\n",
    "    print('\\n\\n')\n",
    "    print(\"***********************************************\")\n",
    "    print(onto_name)\n",
    "    print(\"***********************************************\")\n",
    "    try:\n",
    "        # ontology\n",
    "        submission = submissions_dict[onto_name][YEAR]\n",
    "        onto = Ontology(name=onto_name, year=YEAR, submission_id=submission['submissionId'], root_folder=ONTOLOGY_ROOT)\n",
    "        onto.load_ontology()\n",
    "        onto.create_adjacency_matrix()\n",
    "        onto.create_adjacency_matrix(lcc=True)\n",
    "        onto.save_graph(path=ONTOLOGY_GRAPH_OUTPUT)\n",
    "        onto.save_adjacency(path=ONTOLOGY_ADJACENCY_OUTPUT)\n",
    "        onto.save_adjacency(path=ONTOLOGY_ADJACENCY_OUTPUT, lcc=True)\n",
    "        onto.save_nodes(path=ONTOLOGY_NODES_OUTPUT)\n",
    "        onto.save_nodes(path=ONTOLOGY_NODES_OUTPUT, lcc=True)\n",
    "        \n",
    "    except Exception as ex:\n",
    "        onto = None\n",
    "        print(ex)\n",
    "    \n",
    "    ### Transitions per navigation type\n",
    "    if onto is not None:\n",
    "        for navitype in [None]+NAVITYPES:\n",
    "            print(\"==================\")\n",
    "            print(navitype)\n",
    "            print(\"==================\")\n",
    "\n",
    "            try:\n",
    "                # all transitions\n",
    "                cs = Transition(onto_name, navitype, YEAR)\n",
    "                cs.load_clickstream_and_validate(valid_clickstreams,onto.sorted_nodes,MIN_SESSION_LENGTH)            \n",
    "                cs.create_adjacency_matrix(sorted_nodes=onto.sorted_nodes)\n",
    "                cs.save_graph(path=TRANS_GRAPH_OUTPUT)\n",
    "                cs.save_adjacency(path=TRANS_ADJACENCY_OUTPUT)\n",
    "                cs.save_nodes(path=TRANS_NODES_OUTPUT)\n",
    "                all_transitions[navitype] += cs.T.sum()\n",
    "                del(cs)\n",
    "                \n",
    "                \n",
    "                # transitions in LCC\n",
    "                cs = Transition(onto_name, navitype, YEAR)\n",
    "                cs.load_clickstream_and_validate(valid_clickstreams,onto.lcc_sorted_nodes,MIN_SESSION_LENGTH)            \n",
    "                cs.create_adjacency_matrix(sorted_nodes=onto.lcc_sorted_nodes)\n",
    "                cs.save_graph(path=LCC_TRANS_GRAPH_OUTPUT)\n",
    "                cs.save_adjacency(path=LCC_TRANS_ADJACENCY_OUTPUT)\n",
    "                cs.save_nodes(path=LCC_TRANS_NODES_OUTPUT)\n",
    "                lcc_transitions[navitype] += cs.T.sum()\n",
    "                del(cs)\n",
    "                \n",
    "            except Exception as ex:\n",
    "                print(ex)\n",
    "    del(onto)\n",
    "    print('{} all transitions (so far)\\n'.format(all_transitions[navitype]))\n",
    "    print('{} lcc transitions (so far)\\n'.format(lcc_transitions[navitype]))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 15,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "SNOMEDCT\n",
      "***********************************************\n",
      "2019-02-12 21:58:00\t/bigdata/lespin/datasets/bioportal/ontologies/SNOMEDCT/11/SNOMEDCT.csv.gz loaded!\n",
      "2019-02-12 21:59:17\tConvertion SNOMEDCT-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 22:00:07\t/bigdata/lespin/bioportal/ontologies/graph/SNOMEDCT_2015.gpickle saved!\n",
      "2019-02-12 22:00:07\t/bigdata/lespin/bioportal/ontologies/matrix/SNOMEDCT_2015.npz saved!\n",
      "2019-02-12 22:00:08\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_SNOMEDCT_2015.npz saved!\n",
      "2019-02-12 22:00:09\t/bigdata/lespin/bioportal/ontologies/nodes/SNOMEDCT_2015.csv saved!\n",
      "2019-02-12 22:00:10\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_SNOMEDCT_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 22:01:22\tSNOMEDCT-2015-None: 51457 concepts found, but 51297 kept (cros-val)\n",
      "2019-02-12 22:01:24\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:01:25\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_ALL.npz saved!\n",
      "2019-02-12 22:01:25\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_ALL.csv saved!\n",
      "2019-02-12 22:02:36\tSNOMEDCT-2015-None: 51457 concepts found, but 51206 kept (cros-val)\n",
      "2019-02-12 22:02:38\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:02:38\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_ALL.npz saved!\n",
      "2019-02-12 22:02:38\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 22:03:50\tSNOMEDCT-2015-DC: 6309 concepts found, but 6283 kept (cros-val)\n",
      "2019-02-12 22:03:50\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_DC.gpickle saved!\n",
      "2019-02-12 22:03:50\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_DC.npz saved!\n",
      "2019-02-12 22:03:50\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_DC.csv saved!\n",
      "2019-02-12 22:05:01\tSNOMEDCT-2015-DC: 6309 concepts found, but 6265 kept (cros-val)\n",
      "2019-02-12 22:05:01\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_DC.gpickle saved!\n",
      "2019-02-12 22:05:01\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_DC.npz saved!\n",
      "2019-02-12 22:05:01\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 22:06:13\tSNOMEDCT-2015-DE: 10633 concepts found, but 10603 kept (cros-val)\n",
      "2019-02-12 22:06:14\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_DE.gpickle saved!\n",
      "2019-02-12 22:06:14\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_DE.npz saved!\n",
      "2019-02-12 22:06:14\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_DE.csv saved!\n",
      "2019-02-12 22:07:24\tSNOMEDCT-2015-DE: 10633 concepts found, but 10549 kept (cros-val)\n",
      "2019-02-12 22:07:25\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_DE.gpickle saved!\n",
      "2019-02-12 22:07:25\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_DE.npz saved!\n",
      "2019-02-12 22:07:25\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 22:08:36\tSNOMEDCT-2015-EX: 23958 concepts found, but 23931 kept (cros-val)\n",
      "2019-02-12 22:08:38\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_EX.gpickle saved!\n",
      "2019-02-12 22:08:38\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_EX.npz saved!\n",
      "2019-02-12 22:08:38\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_EX.csv saved!\n",
      "2019-02-12 22:09:50\tSNOMEDCT-2015-EX: 23958 concepts found, but 23891 kept (cros-val)\n",
      "2019-02-12 22:09:52\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_EX.gpickle saved!\n",
      "2019-02-12 22:09:52\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_EX.npz saved!\n",
      "2019-02-12 22:09:52\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 22:11:12\tSNOMEDCT-2015-DU: 15993 concepts found, but 15923 kept (cros-val)\n",
      "2019-02-12 22:11:12\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_DU.gpickle saved!\n",
      "2019-02-12 22:11:12\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_DU.npz saved!\n",
      "2019-02-12 22:11:12\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_DU.csv saved!\n",
      "2019-02-12 22:12:42\tSNOMEDCT-2015-DU: 15993 concepts found, but 15909 kept (cros-val)\n",
      "2019-02-12 22:12:43\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_DU.gpickle saved!\n",
      "2019-02-12 22:12:43\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_DU.npz saved!\n",
      "2019-02-12 22:12:43\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 22:14:06\tSNOMEDCT-2015-LS: 14071 concepts found, but 14011 kept (cros-val)\n",
      "2019-02-12 22:14:07\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_LS.gpickle saved!\n",
      "2019-02-12 22:14:07\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_LS.npz saved!\n",
      "2019-02-12 22:14:07\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_LS.csv saved!\n",
      "2019-02-12 22:15:30\tSNOMEDCT-2015-LS: 14071 concepts found, but 13972 kept (cros-val)\n",
      "2019-02-12 22:15:31\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_LS.gpickle saved!\n",
      "2019-02-12 22:15:31\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_LS.npz saved!\n",
      "2019-02-12 22:15:31\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 22:16:53\tSNOMEDCT-2015-ES: 1479 concepts found, but 1475 kept (cros-val)\n",
      "2019-02-12 22:16:53\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_ES.gpickle saved!\n",
      "2019-02-12 22:16:53\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_ES.npz saved!\n",
      "2019-02-12 22:16:53\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_ES.csv saved!\n",
      "2019-02-12 22:18:15\tSNOMEDCT-2015-ES: 1479 concepts found, but 1467 kept (cros-val)\n",
      "2019-02-12 22:18:15\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_ES.gpickle saved!\n",
      "2019-02-12 22:18:15\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_ES.npz saved!\n",
      "2019-02-12 22:18:15\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 22:19:39\tSNOMEDCT-2015-EL: 370 concepts found, but 368 kept (cros-val)\n",
      "2019-02-12 22:19:39\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_EL.gpickle saved!\n",
      "2019-02-12 22:19:39\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_EL.npz saved!\n",
      "2019-02-12 22:19:39\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_EL.csv saved!\n",
      "2019-02-12 22:21:03\tSNOMEDCT-2015-EL: 370 concepts found, but 367 kept (cros-val)\n",
      "2019-02-12 22:21:03\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_EL.gpickle saved!\n",
      "2019-02-12 22:21:03\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_EL.npz saved!\n",
      "2019-02-12 22:21:03\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 22:22:27\tSNOMEDCT-2015-HS: 101 concepts found, but 101 kept (cros-val)\n",
      "2019-02-12 22:22:27\t/bigdata/lespin/bioportal/transitions/graph/SNOMEDCT_2015_HS.gpickle saved!\n",
      "2019-02-12 22:22:27\t/bigdata/lespin/bioportal/transitions/matrix/SNOMEDCT_2015_HS.npz saved!\n",
      "2019-02-12 22:22:27\t/bigdata/lespin/bioportal/transitions/nodes/SNOMEDCT_2015_HS.csv saved!\n",
      "2019-02-12 22:23:51\tSNOMEDCT-2015-HS: 101 concepts found, but 101 kept (cros-val)\n",
      "2019-02-12 22:23:51\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNOMEDCT_2015_HS.gpickle saved!\n",
      "2019-02-12 22:23:51\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNOMEDCT_2015_HS.npz saved!\n",
      "2019-02-12 22:23:51\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNOMEDCT_2015_HS.csv saved!\n",
      "56 all transitions (so far)\n",
      "\n",
      "56 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "CPT\n",
      "***********************************************\n",
      "2019-02-12 22:23:54\t/bigdata/lespin/datasets/bioportal/ontologies/CPT/6/CPT.csv.gz loaded!\n",
      "2019-02-12 22:23:57\tConvertion CPT-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 22:23:58\t/bigdata/lespin/bioportal/ontologies/graph/CPT_2015.gpickle saved!\n",
      "2019-02-12 22:23:58\t/bigdata/lespin/bioportal/ontologies/matrix/CPT_2015.npz saved!\n",
      "2019-02-12 22:23:58\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_CPT_2015.npz saved!\n",
      "2019-02-12 22:23:58\t/bigdata/lespin/bioportal/ontologies/nodes/CPT_2015.csv saved!\n",
      "2019-02-12 22:23:59\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_CPT_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 22:24:53\tCPT-2015-None: 10231 concepts found, but 10075 kept (cros-val)\n",
      "2019-02-12 22:24:53\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:24:53\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_ALL.npz saved!\n",
      "2019-02-12 22:24:53\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_ALL.csv saved!\n",
      "2019-02-12 22:25:46\tCPT-2015-None: 10231 concepts found, but 10058 kept (cros-val)\n",
      "2019-02-12 22:25:46\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:25:47\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_ALL.npz saved!\n",
      "2019-02-12 22:25:47\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 22:26:41\tCPT-2015-DC: 4319 concepts found, but 4291 kept (cros-val)\n",
      "2019-02-12 22:26:41\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_DC.gpickle saved!\n",
      "2019-02-12 22:26:41\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_DC.npz saved!\n",
      "2019-02-12 22:26:41\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_DC.csv saved!\n",
      "2019-02-12 22:27:36\tCPT-2015-DC: 4319 concepts found, but 4285 kept (cros-val)\n",
      "2019-02-12 22:27:36\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_DC.gpickle saved!\n",
      "2019-02-12 22:27:36\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_DC.npz saved!\n",
      "2019-02-12 22:27:36\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 22:28:30\tCPT-2015-DE: 6033 concepts found, but 5944 kept (cros-val)\n",
      "2019-02-12 22:28:30\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_DE.gpickle saved!\n",
      "2019-02-12 22:28:30\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_DE.npz saved!\n",
      "2019-02-12 22:28:30\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_DE.csv saved!\n",
      "2019-02-12 22:29:27\tCPT-2015-DE: 6033 concepts found, but 5938 kept (cros-val)\n",
      "2019-02-12 22:29:27\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_DE.gpickle saved!\n",
      "2019-02-12 22:29:27\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_DE.npz saved!\n",
      "2019-02-12 22:29:27\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 22:30:23\tCPT-2015-EX: 4065 concepts found, but 4021 kept (cros-val)\n",
      "2019-02-12 22:30:23\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_EX.gpickle saved!\n",
      "2019-02-12 22:30:23\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_EX.npz saved!\n",
      "2019-02-12 22:30:23\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_EX.csv saved!\n",
      "2019-02-12 22:31:19\tCPT-2015-EX: 4065 concepts found, but 4017 kept (cros-val)\n",
      "2019-02-12 22:31:19\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_EX.gpickle saved!\n",
      "2019-02-12 22:31:19\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_EX.npz saved!\n",
      "2019-02-12 22:31:19\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 22:32:13\tCPT-2015-DU: 1953 concepts found, but 1905 kept (cros-val)\n",
      "2019-02-12 22:32:13\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_DU.gpickle saved!\n",
      "2019-02-12 22:32:13\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_DU.npz saved!\n",
      "2019-02-12 22:32:13\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_DU.csv saved!\n",
      "2019-02-12 22:33:07\tCPT-2015-DU: 1953 concepts found, but 1903 kept (cros-val)\n",
      "2019-02-12 22:33:08\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_DU.gpickle saved!\n",
      "2019-02-12 22:33:08\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_DU.npz saved!\n",
      "2019-02-12 22:33:08\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 22:34:03\tCPT-2015-LS: 6286 concepts found, but 6214 kept (cros-val)\n",
      "2019-02-12 22:34:03\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_LS.gpickle saved!\n",
      "2019-02-12 22:34:03\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_LS.npz saved!\n",
      "2019-02-12 22:34:03\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_LS.csv saved!\n",
      "2019-02-12 22:34:59\tCPT-2015-LS: 6286 concepts found, but 6200 kept (cros-val)\n",
      "2019-02-12 22:34:59\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_LS.gpickle saved!\n",
      "2019-02-12 22:34:59\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_LS.npz saved!\n",
      "2019-02-12 22:34:59\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 22:35:56\tCPT-2015-ES: 2760 concepts found, but 2730 kept (cros-val)\n",
      "2019-02-12 22:35:56\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_ES.gpickle saved!\n",
      "2019-02-12 22:35:56\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_ES.npz saved!\n",
      "2019-02-12 22:35:56\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_ES.csv saved!\n",
      "2019-02-12 22:36:48\tCPT-2015-ES: 2760 concepts found, but 2727 kept (cros-val)\n",
      "2019-02-12 22:36:49\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_ES.gpickle saved!\n",
      "2019-02-12 22:36:49\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_ES.npz saved!\n",
      "2019-02-12 22:36:49\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 22:37:45\tCPT-2015-EL: 126 concepts found, but 123 kept (cros-val)\n",
      "2019-02-12 22:37:45\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_EL.gpickle saved!\n",
      "2019-02-12 22:37:45\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_EL.npz saved!\n",
      "2019-02-12 22:37:45\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_EL.csv saved!\n",
      "2019-02-12 22:38:41\tCPT-2015-EL: 126 concepts found, but 121 kept (cros-val)\n",
      "2019-02-12 22:38:41\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_EL.gpickle saved!\n",
      "2019-02-12 22:38:41\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_EL.npz saved!\n",
      "2019-02-12 22:38:41\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 22:39:38\tCPT-2015-HS: 8 concepts found, but 6 kept (cros-val)\n",
      "2019-02-12 22:39:39\t/bigdata/lespin/bioportal/transitions/graph/CPT_2015_HS.gpickle saved!\n",
      "2019-02-12 22:39:39\t/bigdata/lespin/bioportal/transitions/matrix/CPT_2015_HS.npz saved!\n",
      "2019-02-12 22:39:39\t/bigdata/lespin/bioportal/transitions/nodes/CPT_2015_HS.csv saved!\n",
      "2019-02-12 22:40:32\tCPT-2015-HS: 8 concepts found, but 6 kept (cros-val)\n",
      "2019-02-12 22:40:32\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CPT_2015_HS.gpickle saved!\n",
      "2019-02-12 22:40:32\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CPT_2015_HS.npz saved!\n",
      "2019-02-12 22:40:32\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CPT_2015_HS.csv saved!\n",
      "59 all transitions (so far)\n",
      "\n",
      "59 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ICD10\n",
      "***********************************************\n",
      "2019-02-12 22:40:33\t/bigdata/lespin/datasets/bioportal/ontologies/ICD10/6/ICD10.csv.gz loaded!\n",
      "2019-02-12 22:40:36\tConvertion ICD10-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 22:40:37\t/bigdata/lespin/bioportal/ontologies/graph/ICD10_2015.gpickle saved!\n",
      "2019-02-12 22:40:37\t/bigdata/lespin/bioportal/ontologies/matrix/ICD10_2015.npz saved!\n",
      "2019-02-12 22:40:37\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_ICD10_2015.npz saved!\n",
      "2019-02-12 22:40:37\t/bigdata/lespin/bioportal/ontologies/nodes/ICD10_2015.csv saved!\n",
      "2019-02-12 22:40:37\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_ICD10_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 22:40:39\tICD10-2015-None: 1082 concepts found, but 1077 kept (cros-val)\n",
      "2019-02-12 22:40:39\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:40:39\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_ALL.npz saved!\n",
      "2019-02-12 22:40:39\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_ALL.csv saved!\n",
      "2019-02-12 22:40:41\tICD10-2015-None: 1082 concepts found, but 1054 kept (cros-val)\n",
      "2019-02-12 22:40:41\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:40:41\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_ALL.npz saved!\n",
      "2019-02-12 22:40:41\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 22:40:43\tICD10-2015-DC: 398 concepts found, but 397 kept (cros-val)\n",
      "2019-02-12 22:40:43\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_DC.gpickle saved!\n",
      "2019-02-12 22:40:43\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_DC.npz saved!\n",
      "2019-02-12 22:40:43\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_DC.csv saved!\n",
      "2019-02-12 22:40:46\tICD10-2015-DC: 398 concepts found, but 395 kept (cros-val)\n",
      "2019-02-12 22:40:46\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_DC.gpickle saved!\n",
      "2019-02-12 22:40:46\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_DC.npz saved!\n",
      "2019-02-12 22:40:46\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 22:40:48\tICD10-2015-DE: 499 concepts found, but 496 kept (cros-val)\n",
      "2019-02-12 22:40:48\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_DE.gpickle saved!\n",
      "2019-02-12 22:40:48\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_DE.npz saved!\n",
      "2019-02-12 22:40:48\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_DE.csv saved!\n",
      "2019-02-12 22:40:50\tICD10-2015-DE: 499 concepts found, but 489 kept (cros-val)\n",
      "2019-02-12 22:40:50\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_DE.gpickle saved!\n",
      "2019-02-12 22:40:50\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_DE.npz saved!\n",
      "2019-02-12 22:40:50\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 22:40:52\tICD10-2015-EX: 484 concepts found, but 482 kept (cros-val)\n",
      "2019-02-12 22:40:52\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_EX.gpickle saved!\n",
      "2019-02-12 22:40:52\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_EX.npz saved!\n",
      "2019-02-12 22:40:52\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_EX.csv saved!\n",
      "2019-02-12 22:40:55\tICD10-2015-EX: 484 concepts found, but 478 kept (cros-val)\n",
      "2019-02-12 22:40:55\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_EX.gpickle saved!\n",
      "2019-02-12 22:40:55\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_EX.npz saved!\n",
      "2019-02-12 22:40:55\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 22:40:57\tICD10-2015-DU: 60 concepts found, but 57 kept (cros-val)\n",
      "2019-02-12 22:40:57\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_DU.gpickle saved!\n",
      "2019-02-12 22:40:57\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_DU.npz saved!\n",
      "2019-02-12 22:40:57\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_DU.csv saved!\n",
      "2019-02-12 22:40:59\tICD10-2015-DU: 60 concepts found, but 56 kept (cros-val)\n",
      "2019-02-12 22:40:59\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_DU.gpickle saved!\n",
      "2019-02-12 22:40:59\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_DU.npz saved!\n",
      "2019-02-12 22:40:59\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 22:41:01\tICD10-2015-LS: 325 concepts found, but 324 kept (cros-val)\n",
      "2019-02-12 22:41:01\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_LS.gpickle saved!\n",
      "2019-02-12 22:41:01\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_LS.npz saved!\n",
      "2019-02-12 22:41:01\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_LS.csv saved!\n",
      "2019-02-12 22:41:03\tICD10-2015-LS: 325 concepts found, but 309 kept (cros-val)\n",
      "2019-02-12 22:41:03\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_LS.gpickle saved!\n",
      "2019-02-12 22:41:03\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_LS.npz saved!\n",
      "2019-02-12 22:41:03\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 22:41:06\tICD10-2015-ES: 13 concepts found, but 13 kept (cros-val)\n",
      "2019-02-12 22:41:06\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_ES.gpickle saved!\n",
      "2019-02-12 22:41:06\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_ES.npz saved!\n",
      "2019-02-12 22:41:06\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_ES.csv saved!\n",
      "2019-02-12 22:41:08\tICD10-2015-ES: 13 concepts found, but 12 kept (cros-val)\n",
      "2019-02-12 22:41:08\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_ES.gpickle saved!\n",
      "2019-02-12 22:41:08\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_ES.npz saved!\n",
      "2019-02-12 22:41:08\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 22:41:10\tICD10-2015-EL: 4 concepts found, but 3 kept (cros-val)\n",
      "2019-02-12 22:41:10\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_EL.gpickle saved!\n",
      "2019-02-12 22:41:10\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_EL.npz saved!\n",
      "2019-02-12 22:41:10\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_EL.csv saved!\n",
      "2019-02-12 22:41:12\tICD10-2015-EL: 4 concepts found, but 3 kept (cros-val)\n",
      "2019-02-12 22:41:12\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_EL.gpickle saved!\n",
      "2019-02-12 22:41:12\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_EL.npz saved!\n",
      "2019-02-12 22:41:12\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 22:41:14\tICD10-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:41:14\t/bigdata/lespin/bioportal/transitions/graph/ICD10_2015_HS.gpickle saved!\n",
      "2019-02-12 22:41:14\t/bigdata/lespin/bioportal/transitions/matrix/ICD10_2015_HS.npz saved!\n",
      "2019-02-12 22:41:14\t/bigdata/lespin/bioportal/transitions/nodes/ICD10_2015_HS.csv saved!\n",
      "2019-02-12 22:41:16\tICD10-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:41:16\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD10_2015_HS.gpickle saved!\n",
      "2019-02-12 22:41:16\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD10_2015_HS.npz saved!\n",
      "2019-02-12 22:41:16\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD10_2015_HS.csv saved!\n",
      "59.0 all transitions (so far)\n",
      "\n",
      "59.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "RXNORM\n",
      "***********************************************\n",
      "2019-02-12 22:41:22\t/bigdata/lespin/datasets/bioportal/ontologies/RXNORM/9/RXNORM.csv.gz loaded!\n",
      "2019-02-12 22:41:52\tConvertion RXNORM-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 22:42:05\t/bigdata/lespin/bioportal/ontologies/graph/RXNORM_2015.gpickle saved!\n",
      "2019-02-12 22:42:05\t/bigdata/lespin/bioportal/ontologies/matrix/RXNORM_2015.npz saved!\n",
      "2019-02-12 22:42:05\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_RXNORM_2015.npz saved!\n",
      "2019-02-12 22:42:06\t/bigdata/lespin/bioportal/ontologies/nodes/RXNORM_2015.csv saved!\n",
      "2019-02-12 22:42:06\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_RXNORM_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 22:42:53\tRXNORM-2015-None: 19093 concepts found, but 18753 kept (cros-val)\n",
      "2019-02-12 22:42:54\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:42:54\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_ALL.npz saved!\n",
      "2019-02-12 22:42:54\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_ALL.csv saved!\n",
      "2019-02-12 22:43:40\tRXNORM-2015-None: 19093 concepts found, but 19 kept (cros-val)\n",
      "2019-02-12 22:43:40\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:43:40\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_ALL.npz saved!\n",
      "2019-02-12 22:43:40\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 22:44:26\tRXNORM-2015-DC: 84 concepts found, but 83 kept (cros-val)\n",
      "2019-02-12 22:44:27\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_DC.gpickle saved!\n",
      "2019-02-12 22:44:27\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_DC.npz saved!\n",
      "2019-02-12 22:44:27\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_DC.csv saved!\n",
      "2019-02-12 22:45:13\tRXNORM-2015-DC: 84 concepts found, but 3 kept (cros-val)\n",
      "2019-02-12 22:45:13\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_DC.gpickle saved!\n",
      "2019-02-12 22:45:13\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_DC.npz saved!\n",
      "2019-02-12 22:45:13\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 22:45:59\tRXNORM-2015-DE: 11698 concepts found, but 11497 kept (cros-val)\n",
      "2019-02-12 22:46:00\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_DE.gpickle saved!\n",
      "2019-02-12 22:46:00\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_DE.npz saved!\n",
      "2019-02-12 22:46:00\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_DE.csv saved!\n",
      "2019-02-12 22:46:46\tRXNORM-2015-DE: 11698 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 22:46:46\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_DE.gpickle saved!\n",
      "2019-02-12 22:46:46\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_DE.npz saved!\n",
      "2019-02-12 22:46:46\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 22:47:33\tRXNORM-2015-EX: 6 concepts found, but 6 kept (cros-val)\n",
      "2019-02-12 22:47:33\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_EX.gpickle saved!\n",
      "2019-02-12 22:47:33\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_EX.npz saved!\n",
      "2019-02-12 22:47:33\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_EX.csv saved!\n",
      "2019-02-12 22:48:21\tRXNORM-2015-EX: 6 concepts found, but 6 kept (cros-val)\n",
      "2019-02-12 22:48:21\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_EX.gpickle saved!\n",
      "2019-02-12 22:48:21\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_EX.npz saved!\n",
      "2019-02-12 22:48:21\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 22:49:05\tRXNORM-2015-DU: 2851 concepts found, but 2804 kept (cros-val)\n",
      "2019-02-12 22:49:06\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_DU.gpickle saved!\n",
      "2019-02-12 22:49:06\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_DU.npz saved!\n",
      "2019-02-12 22:49:06\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_DU.csv saved!\n",
      "2019-02-12 22:49:53\tRXNORM-2015-DU: 2851 concepts found, but 1 kept (cros-val)\n",
      "2019-02-12 22:49:53\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_DU.gpickle saved!\n",
      "2019-02-12 22:49:53\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_DU.npz saved!\n",
      "2019-02-12 22:49:53\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 22:50:41\tRXNORM-2015-LS: 6003 concepts found, but 5962 kept (cros-val)\n",
      "2019-02-12 22:50:41\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_LS.gpickle saved!\n",
      "2019-02-12 22:50:41\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_LS.npz saved!\n",
      "2019-02-12 22:50:41\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_LS.csv saved!\n",
      "2019-02-12 22:51:28\tRXNORM-2015-LS: 6003 concepts found, but 10 kept (cros-val)\n",
      "2019-02-12 22:51:28\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_LS.gpickle saved!\n",
      "2019-02-12 22:51:28\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_LS.npz saved!\n",
      "2019-02-12 22:51:28\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 22:52:12\tRXNORM-2015-ES: 6747 concepts found, but 6615 kept (cros-val)\n",
      "2019-02-12 22:52:13\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_ES.gpickle saved!\n",
      "2019-02-12 22:52:13\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_ES.npz saved!\n",
      "2019-02-12 22:52:13\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_ES.csv saved!\n",
      "2019-02-12 22:52:58\tRXNORM-2015-ES: 6747 concepts found, but 3 kept (cros-val)\n",
      "2019-02-12 22:52:58\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_ES.gpickle saved!\n",
      "2019-02-12 22:52:58\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_ES.npz saved!\n",
      "2019-02-12 22:52:58\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 22:53:45\tRXNORM-2015-EL: 368 concepts found, but 366 kept (cros-val)\n",
      "2019-02-12 22:53:45\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_EL.gpickle saved!\n",
      "2019-02-12 22:53:45\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_EL.npz saved!\n",
      "2019-02-12 22:53:45\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_EL.csv saved!\n",
      "2019-02-12 22:54:30\tRXNORM-2015-EL: 368 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:54:30\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_EL.gpickle saved!\n",
      "2019-02-12 22:54:30\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_EL.npz saved!\n",
      "2019-02-12 22:54:30\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 22:55:17\tRXNORM-2015-HS: 26 concepts found, but 26 kept (cros-val)\n",
      "2019-02-12 22:55:18\t/bigdata/lespin/bioportal/transitions/graph/RXNORM_2015_HS.gpickle saved!\n",
      "2019-02-12 22:55:18\t/bigdata/lespin/bioportal/transitions/matrix/RXNORM_2015_HS.npz saved!\n",
      "2019-02-12 22:55:18\t/bigdata/lespin/bioportal/transitions/nodes/RXNORM_2015_HS.csv saved!\n",
      "2019-02-12 22:56:05\tRXNORM-2015-HS: 26 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:56:06\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RXNORM_2015_HS.gpickle saved!\n",
      "2019-02-12 22:56:06\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RXNORM_2015_HS.npz saved!\n",
      "2019-02-12 22:56:06\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RXNORM_2015_HS.csv saved!\n",
      "73.0 all transitions (so far)\n",
      "\n",
      "59.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "RCD\n",
      "***********************************************\n",
      "2019-02-12 22:56:06\t/bigdata/lespin/datasets/bioportal/ontologies/RCD/6/RCD.csv.gz loaded!\n",
      "2019-02-12 22:56:08\tConvertion RCD-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 22:56:09\t/bigdata/lespin/bioportal/ontologies/graph/RCD_2015.gpickle saved!\n",
      "2019-02-12 22:56:09\t/bigdata/lespin/bioportal/ontologies/matrix/RCD_2015.npz saved!\n",
      "2019-02-12 22:56:09\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_RCD_2015.npz saved!\n",
      "2019-02-12 22:56:09\t/bigdata/lespin/bioportal/ontologies/nodes/RCD_2015.csv saved!\n",
      "2019-02-12 22:56:09\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_RCD_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 22:56:16\tRCD-2015-None: 3974 concepts found, but 1079 kept (cros-val)\n",
      "2019-02-12 22:56:16\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:56:16\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_ALL.npz saved!\n",
      "2019-02-12 22:56:16\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_ALL.csv saved!\n",
      "2019-02-12 22:56:22\tRCD-2015-None: 3974 concepts found, but 1 kept (cros-val)\n",
      "2019-02-12 22:56:22\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:56:22\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_ALL.npz saved!\n",
      "2019-02-12 22:56:22\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 22:56:29\tRCD-2015-DC: 669 concepts found, but 187 kept (cros-val)\n",
      "2019-02-12 22:56:29\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_DC.gpickle saved!\n",
      "2019-02-12 22:56:29\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_DC.npz saved!\n",
      "2019-02-12 22:56:29\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_DC.csv saved!\n",
      "2019-02-12 22:56:36\tRCD-2015-DC: 669 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:56:36\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_DC.gpickle saved!\n",
      "2019-02-12 22:56:36\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_DC.npz saved!\n",
      "2019-02-12 22:56:36\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 22:56:42\tRCD-2015-DE: 1937 concepts found, but 537 kept (cros-val)\n",
      "2019-02-12 22:56:42\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_DE.gpickle saved!\n",
      "2019-02-12 22:56:42\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_DE.npz saved!\n",
      "2019-02-12 22:56:42\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_DE.csv saved!\n",
      "2019-02-12 22:56:49\tRCD-2015-DE: 1937 concepts found, but 1 kept (cros-val)\n",
      "2019-02-12 22:56:49\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_DE.gpickle saved!\n",
      "2019-02-12 22:56:49\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_DE.npz saved!\n",
      "2019-02-12 22:56:49\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 22:56:56\tRCD-2015-EX: 1701 concepts found, but 526 kept (cros-val)\n",
      "2019-02-12 22:56:56\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_EX.gpickle saved!\n",
      "2019-02-12 22:56:56\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_EX.npz saved!\n",
      "2019-02-12 22:56:56\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_EX.csv saved!\n",
      "2019-02-12 22:57:02\tRCD-2015-EX: 1701 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:57:02\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_EX.gpickle saved!\n",
      "2019-02-12 22:57:02\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_EX.npz saved!\n",
      "2019-02-12 22:57:02\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 22:57:09\tRCD-2015-DU: 463 concepts found, but 109 kept (cros-val)\n",
      "2019-02-12 22:57:09\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_DU.gpickle saved!\n",
      "2019-02-12 22:57:09\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_DU.npz saved!\n",
      "2019-02-12 22:57:09\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_DU.csv saved!\n",
      "2019-02-12 22:57:15\tRCD-2015-DU: 463 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:57:15\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_DU.gpickle saved!\n",
      "2019-02-12 22:57:15\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_DU.npz saved!\n",
      "2019-02-12 22:57:15\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 22:57:22\tRCD-2015-LS: 406 concepts found, but 89 kept (cros-val)\n",
      "2019-02-12 22:57:22\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_LS.gpickle saved!\n",
      "2019-02-12 22:57:22\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_LS.npz saved!\n",
      "2019-02-12 22:57:22\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_LS.csv saved!\n",
      "2019-02-12 22:57:29\tRCD-2015-LS: 406 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:57:29\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_LS.gpickle saved!\n",
      "2019-02-12 22:57:29\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_LS.npz saved!\n",
      "2019-02-12 22:57:29\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 22:57:36\tRCD-2015-ES: 287 concepts found, but 84 kept (cros-val)\n",
      "2019-02-12 22:57:36\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_ES.gpickle saved!\n",
      "2019-02-12 22:57:36\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_ES.npz saved!\n",
      "2019-02-12 22:57:36\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_ES.csv saved!\n",
      "2019-02-12 22:57:43\tRCD-2015-ES: 287 concepts found, but 1 kept (cros-val)\n",
      "2019-02-12 22:57:43\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_ES.gpickle saved!\n",
      "2019-02-12 22:57:43\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_ES.npz saved!\n",
      "2019-02-12 22:57:43\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 22:57:50\tRCD-2015-EL: 16 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 22:57:50\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_EL.gpickle saved!\n",
      "2019-02-12 22:57:50\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_EL.npz saved!\n",
      "2019-02-12 22:57:50\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_EL.csv saved!\n",
      "2019-02-12 22:57:57\tRCD-2015-EL: 16 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:57:57\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_EL.gpickle saved!\n",
      "2019-02-12 22:57:57\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_EL.npz saved!\n",
      "2019-02-12 22:57:57\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 22:58:03\tRCD-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:58:03\t/bigdata/lespin/bioportal/transitions/graph/RCD_2015_HS.gpickle saved!\n",
      "2019-02-12 22:58:03\t/bigdata/lespin/bioportal/transitions/matrix/RCD_2015_HS.npz saved!\n",
      "2019-02-12 22:58:03\t/bigdata/lespin/bioportal/transitions/nodes/RCD_2015_HS.csv saved!\n",
      "2019-02-12 22:58:10\tRCD-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 22:58:10\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/RCD_2015_HS.gpickle saved!\n",
      "2019-02-12 22:58:10\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/RCD_2015_HS.npz saved!\n",
      "2019-02-12 22:58:10\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/RCD_2015_HS.csv saved!\n",
      "73.0 all transitions (so far)\n",
      "\n",
      "59.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "STY\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/STY/4\n",
      "73.0 all transitions (so far)\n",
      "\n",
      "59.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "NDDF\n",
      "***********************************************\n",
      "2019-02-12 22:58:11\t/bigdata/lespin/datasets/bioportal/ontologies/NDDF/6/NDDF.csv.gz loaded!\n",
      "2019-02-12 22:58:17\tConvertion NDDF-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 22:58:20\t/bigdata/lespin/bioportal/ontologies/graph/NDDF_2015.gpickle saved!\n",
      "2019-02-12 22:58:20\t/bigdata/lespin/bioportal/ontologies/matrix/NDDF_2015.npz saved!\n",
      "2019-02-12 22:58:20\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_NDDF_2015.npz saved!\n",
      "2019-02-12 22:58:20\t/bigdata/lespin/bioportal/ontologies/nodes/NDDF_2015.csv saved!\n",
      "2019-02-12 22:58:20\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_NDDF_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 22:58:34\tNDDF-2015-None: 2131 concepts found, but 2113 kept (cros-val)\n",
      "2019-02-12 22:58:34\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:58:34\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_ALL.npz saved!\n",
      "2019-02-12 22:58:34\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_ALL.csv saved!\n",
      "2019-02-12 22:58:46\tNDDF-2015-None: 2131 concepts found, but 27 kept (cros-val)\n",
      "2019-02-12 22:58:46\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_ALL.gpickle saved!\n",
      "2019-02-12 22:58:46\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_ALL.npz saved!\n",
      "2019-02-12 22:58:46\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 22:58:59\tNDDF-2015-DC: 21 concepts found, but 21 kept (cros-val)\n",
      "2019-02-12 22:58:59\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_DC.gpickle saved!\n",
      "2019-02-12 22:59:00\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_DC.npz saved!\n",
      "2019-02-12 22:59:00\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_DC.csv saved!\n",
      "2019-02-12 22:59:12\tNDDF-2015-DC: 21 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 22:59:12\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_DC.gpickle saved!\n",
      "2019-02-12 22:59:12\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_DC.npz saved!\n",
      "2019-02-12 22:59:12\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 22:59:26\tNDDF-2015-DE: 644 concepts found, but 637 kept (cros-val)\n",
      "2019-02-12 22:59:26\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_DE.gpickle saved!\n",
      "2019-02-12 22:59:26\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_DE.npz saved!\n",
      "2019-02-12 22:59:26\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_DE.csv saved!\n",
      "2019-02-12 22:59:39\tNDDF-2015-DE: 644 concepts found, but 20 kept (cros-val)\n",
      "2019-02-12 22:59:39\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_DE.gpickle saved!\n",
      "2019-02-12 22:59:39\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_DE.npz saved!\n",
      "2019-02-12 22:59:39\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 22:59:52\tNDDF-2015-EX: 11 concepts found, but 11 kept (cros-val)\n",
      "2019-02-12 22:59:52\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_EX.gpickle saved!\n",
      "2019-02-12 22:59:52\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_EX.npz saved!\n",
      "2019-02-12 22:59:52\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_EX.csv saved!\n",
      "2019-02-12 23:00:05\tNDDF-2015-EX: 11 concepts found, but 11 kept (cros-val)\n",
      "2019-02-12 23:00:05\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_EX.gpickle saved!\n",
      "2019-02-12 23:00:05\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_EX.npz saved!\n",
      "2019-02-12 23:00:05\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:00:19\tNDDF-2015-DU: 339 concepts found, but 337 kept (cros-val)\n",
      "2019-02-12 23:00:19\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_DU.gpickle saved!\n",
      "2019-02-12 23:00:19\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_DU.npz saved!\n",
      "2019-02-12 23:00:19\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_DU.csv saved!\n",
      "2019-02-12 23:00:33\tNDDF-2015-DU: 339 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:00:33\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_DU.gpickle saved!\n",
      "2019-02-12 23:00:33\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_DU.npz saved!\n",
      "2019-02-12 23:00:33\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:00:46\tNDDF-2015-LS: 419 concepts found, but 414 kept (cros-val)\n",
      "2019-02-12 23:00:46\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_LS.gpickle saved!\n",
      "2019-02-12 23:00:46\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_LS.npz saved!\n",
      "2019-02-12 23:00:46\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_LS.csv saved!\n",
      "2019-02-12 23:00:59\tNDDF-2015-LS: 419 concepts found, but 6 kept (cros-val)\n",
      "2019-02-12 23:00:59\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_LS.gpickle saved!\n",
      "2019-02-12 23:00:59\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_LS.npz saved!\n",
      "2019-02-12 23:00:59\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:01:13\tNDDF-2015-ES: 1281 concepts found, but 1271 kept (cros-val)\n",
      "2019-02-12 23:01:13\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_ES.gpickle saved!\n",
      "2019-02-12 23:01:13\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_ES.npz saved!\n",
      "2019-02-12 23:01:13\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_ES.csv saved!\n",
      "2019-02-12 23:01:26\tNDDF-2015-ES: 1281 concepts found, but 4 kept (cros-val)\n",
      "2019-02-12 23:01:26\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_ES.gpickle saved!\n",
      "2019-02-12 23:01:26\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_ES.npz saved!\n",
      "2019-02-12 23:01:26\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:01:41\tNDDF-2015-EL: 25 concepts found, but 25 kept (cros-val)\n",
      "2019-02-12 23:01:41\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_EL.gpickle saved!\n",
      "2019-02-12 23:01:41\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_EL.npz saved!\n",
      "2019-02-12 23:01:41\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_EL.csv saved!\n",
      "2019-02-12 23:01:54\tNDDF-2015-EL: 25 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:01:54\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_EL.gpickle saved!\n",
      "2019-02-12 23:01:54\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_EL.npz saved!\n",
      "2019-02-12 23:01:54\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:02:08\tNDDF-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:02:08\t/bigdata/lespin/bioportal/transitions/graph/NDDF_2015_HS.gpickle saved!\n",
      "2019-02-12 23:02:08\t/bigdata/lespin/bioportal/transitions/matrix/NDDF_2015_HS.npz saved!\n",
      "2019-02-12 23:02:08\t/bigdata/lespin/bioportal/transitions/nodes/NDDF_2015_HS.csv saved!\n",
      "2019-02-12 23:02:21\tNDDF-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:02:21\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDDF_2015_HS.gpickle saved!\n",
      "2019-02-12 23:02:21\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDDF_2015_HS.npz saved!\n",
      "2019-02-12 23:02:21\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDDF_2015_HS.csv saved!\n",
      "73.0 all transitions (so far)\n",
      "\n",
      "59.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "MEDDRA\n",
      "***********************************************\n",
      "2019-02-12 23:02:24\t/bigdata/lespin/datasets/bioportal/ontologies/MEDDRA/6/MEDDRA.csv.gz loaded!\n",
      "2019-02-12 23:02:42\tConvertion MEDDRA-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:02:51\t/bigdata/lespin/bioportal/ontologies/graph/MEDDRA_2015.gpickle saved!\n",
      "2019-02-12 23:02:51\t/bigdata/lespin/bioportal/ontologies/matrix/MEDDRA_2015.npz saved!\n",
      "2019-02-12 23:02:51\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_MEDDRA_2015.npz saved!\n",
      "2019-02-12 23:02:51\t/bigdata/lespin/bioportal/ontologies/nodes/MEDDRA_2015.csv saved!\n",
      "2019-02-12 23:02:51\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_MEDDRA_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:03:29\tMEDDRA-2015-None: 17067 concepts found, but 17050 kept (cros-val)\n",
      "2019-02-12 23:03:30\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:03:30\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_ALL.npz saved!\n",
      "2019-02-12 23:03:30\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_ALL.csv saved!\n",
      "2019-02-12 23:04:06\tMEDDRA-2015-None: 17067 concepts found, but 9354 kept (cros-val)\n",
      "2019-02-12 23:04:06\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:04:06\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_ALL.npz saved!\n",
      "2019-02-12 23:04:06\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:04:44\tMEDDRA-2015-DC: 3034 concepts found, but 3033 kept (cros-val)\n",
      "2019-02-12 23:04:44\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_DC.gpickle saved!\n",
      "2019-02-12 23:04:44\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_DC.npz saved!\n",
      "2019-02-12 23:04:44\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_DC.csv saved!\n",
      "2019-02-12 23:05:19\tMEDDRA-2015-DC: 3034 concepts found, but 2901 kept (cros-val)\n",
      "2019-02-12 23:05:19\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_DC.gpickle saved!\n",
      "2019-02-12 23:05:19\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_DC.npz saved!\n",
      "2019-02-12 23:05:19\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:05:55\tMEDDRA-2015-DE: 8381 concepts found, but 8378 kept (cros-val)\n",
      "2019-02-12 23:05:55\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_DE.gpickle saved!\n",
      "2019-02-12 23:05:55\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_DE.npz saved!\n",
      "2019-02-12 23:05:55\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_DE.csv saved!\n",
      "2019-02-12 23:06:30\tMEDDRA-2015-DE: 8381 concepts found, but 4362 kept (cros-val)\n",
      "2019-02-12 23:06:30\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_DE.gpickle saved!\n",
      "2019-02-12 23:06:31\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_DE.npz saved!\n",
      "2019-02-12 23:06:31\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:07:05\tMEDDRA-2015-EX: 3572 concepts found, but 3568 kept (cros-val)\n",
      "2019-02-12 23:07:06\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_EX.gpickle saved!\n",
      "2019-02-12 23:07:06\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_EX.npz saved!\n",
      "2019-02-12 23:07:06\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_EX.csv saved!\n",
      "2019-02-12 23:07:40\tMEDDRA-2015-EX: 3572 concepts found, but 2962 kept (cros-val)\n",
      "2019-02-12 23:07:41\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_EX.gpickle saved!\n",
      "2019-02-12 23:07:41\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_EX.npz saved!\n",
      "2019-02-12 23:07:41\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:08:15\tMEDDRA-2015-DU: 4687 concepts found, but 4674 kept (cros-val)\n",
      "2019-02-12 23:08:15\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_DU.gpickle saved!\n",
      "2019-02-12 23:08:15\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_DU.npz saved!\n",
      "2019-02-12 23:08:15\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_DU.csv saved!\n",
      "2019-02-12 23:08:49\tMEDDRA-2015-DU: 4687 concepts found, but 2357 kept (cros-val)\n",
      "2019-02-12 23:08:49\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_DU.gpickle saved!\n",
      "2019-02-12 23:08:49\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_DU.npz saved!\n",
      "2019-02-12 23:08:49\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:09:23\tMEDDRA-2015-LS: 9916 concepts found, but 9912 kept (cros-val)\n",
      "2019-02-12 23:09:23\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_LS.gpickle saved!\n",
      "2019-02-12 23:09:23\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_LS.npz saved!\n",
      "2019-02-12 23:09:24\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_LS.csv saved!\n",
      "2019-02-12 23:09:57\tMEDDRA-2015-LS: 9916 concepts found, but 4956 kept (cros-val)\n",
      "2019-02-12 23:09:57\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_LS.gpickle saved!\n",
      "2019-02-12 23:09:57\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_LS.npz saved!\n",
      "2019-02-12 23:09:57\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:10:30\tMEDDRA-2015-ES: 1226 concepts found, but 1224 kept (cros-val)\n",
      "2019-02-12 23:10:30\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_ES.gpickle saved!\n",
      "2019-02-12 23:10:30\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_ES.npz saved!\n",
      "2019-02-12 23:10:30\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_ES.csv saved!\n",
      "2019-02-12 23:11:02\tMEDDRA-2015-ES: 1226 concepts found, but 709 kept (cros-val)\n",
      "2019-02-12 23:11:02\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_ES.gpickle saved!\n",
      "2019-02-12 23:11:02\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_ES.npz saved!\n",
      "2019-02-12 23:11:02\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:11:35\tMEDDRA-2015-EL: 118 concepts found, but 118 kept (cros-val)\n",
      "2019-02-12 23:11:35\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_EL.gpickle saved!\n",
      "2019-02-12 23:11:35\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_EL.npz saved!\n",
      "2019-02-12 23:11:35\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_EL.csv saved!\n",
      "2019-02-12 23:12:02\tMEDDRA-2015-EL: 118 concepts found, but 91 kept (cros-val)\n",
      "2019-02-12 23:12:02\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_EL.gpickle saved!\n",
      "2019-02-12 23:12:02\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_EL.npz saved!\n",
      "2019-02-12 23:12:02\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:12:26\tMEDDRA-2015-HS: 78 concepts found, but 78 kept (cros-val)\n",
      "2019-02-12 23:12:26\t/bigdata/lespin/bioportal/transitions/graph/MEDDRA_2015_HS.gpickle saved!\n",
      "2019-02-12 23:12:26\t/bigdata/lespin/bioportal/transitions/matrix/MEDDRA_2015_HS.npz saved!\n",
      "2019-02-12 23:12:26\t/bigdata/lespin/bioportal/transitions/nodes/MEDDRA_2015_HS.csv saved!\n",
      "2019-02-12 23:12:54\tMEDDRA-2015-HS: 78 concepts found, but 47 kept (cros-val)\n",
      "2019-02-12 23:12:54\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MEDDRA_2015_HS.gpickle saved!\n",
      "2019-02-12 23:12:54\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MEDDRA_2015_HS.npz saved!\n",
      "2019-02-12 23:12:54\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MEDDRA_2015_HS.csv saved!\n",
      "126.0 all transitions (so far)\n",
      "\n",
      "89.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "HL7\n",
      "***********************************************\n",
      "2019-02-12 23:12:55\t/bigdata/lespin/datasets/bioportal/ontologies/HL7/6/HL7.csv.gz loaded!\n",
      "2019-02-12 23:12:57\tConvertion HL7-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:12:58\t/bigdata/lespin/bioportal/ontologies/graph/HL7_2015.gpickle saved!\n",
      "2019-02-12 23:12:58\t/bigdata/lespin/bioportal/ontologies/matrix/HL7_2015.npz saved!\n",
      "2019-02-12 23:12:58\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_HL7_2015.npz saved!\n",
      "2019-02-12 23:12:58\t/bigdata/lespin/bioportal/ontologies/nodes/HL7_2015.csv saved!\n",
      "2019-02-12 23:12:58\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_HL7_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:12:59\tHL7-2015-None: 1170 concepts found, but 1103 kept (cros-val)\n",
      "2019-02-12 23:12:59\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:12:59\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_ALL.npz saved!\n",
      "2019-02-12 23:12:59\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_ALL.csv saved!\n",
      "2019-02-12 23:13:00\tHL7-2015-None: 1170 concepts found, but 1091 kept (cros-val)\n",
      "2019-02-12 23:13:00\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:13:00\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_ALL.npz saved!\n",
      "2019-02-12 23:13:00\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:13:01\tHL7-2015-DC: 151 concepts found, but 142 kept (cros-val)\n",
      "2019-02-12 23:13:01\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_DC.gpickle saved!\n",
      "2019-02-12 23:13:01\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_DC.npz saved!\n",
      "2019-02-12 23:13:01\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_DC.csv saved!\n",
      "2019-02-12 23:13:02\tHL7-2015-DC: 151 concepts found, but 142 kept (cros-val)\n",
      "2019-02-12 23:13:02\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_DC.gpickle saved!\n",
      "2019-02-12 23:13:02\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_DC.npz saved!\n",
      "2019-02-12 23:13:02\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:13:03\tHL7-2015-DE: 121 concepts found, but 112 kept (cros-val)\n",
      "2019-02-12 23:13:03\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_DE.gpickle saved!\n",
      "2019-02-12 23:13:03\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_DE.npz saved!\n",
      "2019-02-12 23:13:03\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_DE.csv saved!\n",
      "2019-02-12 23:13:04\tHL7-2015-DE: 121 concepts found, but 107 kept (cros-val)\n",
      "2019-02-12 23:13:04\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_DE.gpickle saved!\n",
      "2019-02-12 23:13:04\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_DE.npz saved!\n",
      "2019-02-12 23:13:04\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:13:05\tHL7-2015-EX: 369 concepts found, but 353 kept (cros-val)\n",
      "2019-02-12 23:13:05\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_EX.gpickle saved!\n",
      "2019-02-12 23:13:05\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_EX.npz saved!\n",
      "2019-02-12 23:13:05\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_EX.csv saved!\n",
      "2019-02-12 23:13:06\tHL7-2015-EX: 369 concepts found, but 346 kept (cros-val)\n",
      "2019-02-12 23:13:06\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_EX.gpickle saved!\n",
      "2019-02-12 23:13:06\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_EX.npz saved!\n",
      "2019-02-12 23:13:06\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:13:07\tHL7-2015-DU: 745 concepts found, but 709 kept (cros-val)\n",
      "2019-02-12 23:13:07\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_DU.gpickle saved!\n",
      "2019-02-12 23:13:07\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_DU.npz saved!\n",
      "2019-02-12 23:13:07\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_DU.csv saved!\n",
      "2019-02-12 23:13:08\tHL7-2015-DU: 745 concepts found, but 705 kept (cros-val)\n",
      "2019-02-12 23:13:08\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_DU.gpickle saved!\n",
      "2019-02-12 23:13:08\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_DU.npz saved!\n",
      "2019-02-12 23:13:08\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:13:09\tHL7-2015-LS: 76 concepts found, but 60 kept (cros-val)\n",
      "2019-02-12 23:13:09\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_LS.gpickle saved!\n",
      "2019-02-12 23:13:09\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_LS.npz saved!\n",
      "2019-02-12 23:13:09\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_LS.csv saved!\n",
      "2019-02-12 23:13:10\tHL7-2015-LS: 76 concepts found, but 56 kept (cros-val)\n",
      "2019-02-12 23:13:10\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_LS.gpickle saved!\n",
      "2019-02-12 23:13:10\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_LS.npz saved!\n",
      "2019-02-12 23:13:10\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:13:11\tHL7-2015-ES: 14 concepts found, but 14 kept (cros-val)\n",
      "2019-02-12 23:13:11\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_ES.gpickle saved!\n",
      "2019-02-12 23:13:11\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_ES.npz saved!\n",
      "2019-02-12 23:13:11\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_ES.csv saved!\n",
      "2019-02-12 23:13:12\tHL7-2015-ES: 14 concepts found, but 14 kept (cros-val)\n",
      "2019-02-12 23:13:12\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_ES.gpickle saved!\n",
      "2019-02-12 23:13:12\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_ES.npz saved!\n",
      "2019-02-12 23:13:12\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:13:13\tHL7-2015-EL: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:13:13\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_EL.gpickle saved!\n",
      "2019-02-12 23:13:13\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_EL.npz saved!\n",
      "2019-02-12 23:13:13\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_EL.csv saved!\n",
      "2019-02-12 23:13:14\tHL7-2015-EL: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:13:14\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_EL.gpickle saved!\n",
      "2019-02-12 23:13:14\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_EL.npz saved!\n",
      "2019-02-12 23:13:14\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:13:15\tHL7-2015-HS: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:13:15\t/bigdata/lespin/bioportal/transitions/graph/HL7_2015_HS.gpickle saved!\n",
      "2019-02-12 23:13:15\t/bigdata/lespin/bioportal/transitions/matrix/HL7_2015_HS.npz saved!\n",
      "2019-02-12 23:13:15\t/bigdata/lespin/bioportal/transitions/nodes/HL7_2015_HS.csv saved!\n",
      "2019-02-12 23:13:16\tHL7-2015-HS: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:13:16\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/HL7_2015_HS.gpickle saved!\n",
      "2019-02-12 23:13:16\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/HL7_2015_HS.npz saved!\n",
      "2019-02-12 23:13:16\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/HL7_2015_HS.csv saved!\n",
      "127.0 all transitions (so far)\n",
      "\n",
      "90.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ICD10CM\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/ICD10CM/7\n",
      "127.0 all transitions (so far)\n",
      "\n",
      "90.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "WHO-ART\n",
      "***********************************************\n",
      "2019-02-12 23:13:16\t/bigdata/lespin/datasets/bioportal/ontologies/WHO-ART/6/WHO-ART.csv.gz loaded!\n",
      "2019-02-12 23:13:17\tConvertion WHO-ART-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:13:17\t/bigdata/lespin/bioportal/ontologies/graph/WHO-ART_2015.gpickle saved!\n",
      "2019-02-12 23:13:17\t/bigdata/lespin/bioportal/ontologies/matrix/WHO-ART_2015.npz saved!\n",
      "2019-02-12 23:13:17\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_WHO-ART_2015.npz saved!\n",
      "2019-02-12 23:13:17\t/bigdata/lespin/bioportal/ontologies/nodes/WHO-ART_2015.csv saved!\n",
      "2019-02-12 23:13:17\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_WHO-ART_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:13:19\tWHO-ART-2015-None: 767 concepts found, but 766 kept (cros-val)\n",
      "2019-02-12 23:13:19\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:13:19\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_ALL.npz saved!\n",
      "2019-02-12 23:13:19\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_ALL.csv saved!\n",
      "2019-02-12 23:13:21\tWHO-ART-2015-None: 767 concepts found, but 759 kept (cros-val)\n",
      "2019-02-12 23:13:21\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:13:21\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_ALL.npz saved!\n",
      "2019-02-12 23:13:21\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:13:22\tWHO-ART-2015-DC: 48 concepts found, but 48 kept (cros-val)\n",
      "2019-02-12 23:13:22\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_DC.gpickle saved!\n",
      "2019-02-12 23:13:22\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_DC.npz saved!\n",
      "2019-02-12 23:13:22\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_DC.csv saved!\n",
      "2019-02-12 23:13:25\tWHO-ART-2015-DC: 48 concepts found, but 47 kept (cros-val)\n",
      "2019-02-12 23:13:25\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_DC.gpickle saved!\n",
      "2019-02-12 23:13:25\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_DC.npz saved!\n",
      "2019-02-12 23:13:25\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:13:27\tWHO-ART-2015-DE: 228 concepts found, but 227 kept (cros-val)\n",
      "2019-02-12 23:13:27\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_DE.gpickle saved!\n",
      "2019-02-12 23:13:27\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_DE.npz saved!\n",
      "2019-02-12 23:13:27\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_DE.csv saved!\n",
      "2019-02-12 23:13:28\tWHO-ART-2015-DE: 228 concepts found, but 224 kept (cros-val)\n",
      "2019-02-12 23:13:28\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_DE.gpickle saved!\n",
      "2019-02-12 23:13:28\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_DE.npz saved!\n",
      "2019-02-12 23:13:28\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:13:30\tWHO-ART-2015-EX: 116 concepts found, but 115 kept (cros-val)\n",
      "2019-02-12 23:13:30\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_EX.gpickle saved!\n",
      "2019-02-12 23:13:30\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_EX.npz saved!\n",
      "2019-02-12 23:13:30\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_EX.csv saved!\n",
      "2019-02-12 23:13:32\tWHO-ART-2015-EX: 116 concepts found, but 113 kept (cros-val)\n",
      "2019-02-12 23:13:32\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_EX.gpickle saved!\n",
      "2019-02-12 23:13:32\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_EX.npz saved!\n",
      "2019-02-12 23:13:32\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:13:34\tWHO-ART-2015-DU: 529 concepts found, but 528 kept (cros-val)\n",
      "2019-02-12 23:13:34\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_DU.gpickle saved!\n",
      "2019-02-12 23:13:34\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_DU.npz saved!\n",
      "2019-02-12 23:13:34\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_DU.csv saved!\n",
      "2019-02-12 23:13:36\tWHO-ART-2015-DU: 529 concepts found, but 528 kept (cros-val)\n",
      "2019-02-12 23:13:36\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_DU.gpickle saved!\n",
      "2019-02-12 23:13:36\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_DU.npz saved!\n",
      "2019-02-12 23:13:36\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:13:38\tWHO-ART-2015-LS: 194 concepts found, but 193 kept (cros-val)\n",
      "2019-02-12 23:13:38\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_LS.gpickle saved!\n",
      "2019-02-12 23:13:38\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_LS.npz saved!\n",
      "2019-02-12 23:13:38\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_LS.csv saved!\n",
      "2019-02-12 23:13:40\tWHO-ART-2015-LS: 194 concepts found, but 188 kept (cros-val)\n",
      "2019-02-12 23:13:40\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_LS.gpickle saved!\n",
      "2019-02-12 23:13:40\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_LS.npz saved!\n",
      "2019-02-12 23:13:40\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:13:42\tWHO-ART-2015-ES: 26 concepts found, but 25 kept (cros-val)\n",
      "2019-02-12 23:13:42\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_ES.gpickle saved!\n",
      "2019-02-12 23:13:42\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_ES.npz saved!\n",
      "2019-02-12 23:13:42\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_ES.csv saved!\n",
      "2019-02-12 23:13:44\tWHO-ART-2015-ES: 26 concepts found, but 25 kept (cros-val)\n",
      "2019-02-12 23:13:44\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_ES.gpickle saved!\n",
      "2019-02-12 23:13:44\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_ES.npz saved!\n",
      "2019-02-12 23:13:44\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:13:46\tWHO-ART-2015-EL: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:13:46\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_EL.gpickle saved!\n",
      "2019-02-12 23:13:46\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_EL.npz saved!\n",
      "2019-02-12 23:13:46\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_EL.csv saved!\n",
      "2019-02-12 23:13:48\tWHO-ART-2015-EL: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:13:48\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_EL.gpickle saved!\n",
      "2019-02-12 23:13:48\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_EL.npz saved!\n",
      "2019-02-12 23:13:48\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:13:50\tWHO-ART-2015-HS: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:13:50\t/bigdata/lespin/bioportal/transitions/graph/WHO-ART_2015_HS.gpickle saved!\n",
      "2019-02-12 23:13:50\t/bigdata/lespin/bioportal/transitions/matrix/WHO-ART_2015_HS.npz saved!\n",
      "2019-02-12 23:13:50\t/bigdata/lespin/bioportal/transitions/nodes/WHO-ART_2015_HS.csv saved!\n",
      "2019-02-12 23:13:52\tWHO-ART-2015-HS: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:13:52\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/WHO-ART_2015_HS.gpickle saved!\n",
      "2019-02-12 23:13:52\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/WHO-ART_2015_HS.npz saved!\n",
      "2019-02-12 23:13:52\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/WHO-ART_2015_HS.csv saved!\n",
      "128.0 all transitions (so far)\n",
      "\n",
      "91.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ICD9CM\n",
      "***********************************************\n",
      "2019-02-12 23:13:53\t/bigdata/lespin/datasets/bioportal/ontologies/ICD9CM/8/ICD9CM.csv.gz loaded!\n",
      "2019-02-12 23:13:58\tConvertion ICD9CM-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:14:01\t/bigdata/lespin/bioportal/ontologies/graph/ICD9CM_2015.gpickle saved!\n",
      "2019-02-12 23:14:01\t/bigdata/lespin/bioportal/ontologies/matrix/ICD9CM_2015.npz saved!\n",
      "2019-02-12 23:14:01\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_ICD9CM_2015.npz saved!\n",
      "2019-02-12 23:14:01\t/bigdata/lespin/bioportal/ontologies/nodes/ICD9CM_2015.csv saved!\n",
      "2019-02-12 23:14:01\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_ICD9CM_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:14:05\tICD9CM-2015-None: 2545 concepts found, but 2544 kept (cros-val)\n",
      "2019-02-12 23:14:05\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:14:05\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_ALL.npz saved!\n",
      "2019-02-12 23:14:05\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_ALL.csv saved!\n",
      "2019-02-12 23:14:10\tICD9CM-2015-None: 2545 concepts found, but 2529 kept (cros-val)\n",
      "2019-02-12 23:14:10\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:14:10\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_ALL.npz saved!\n",
      "2019-02-12 23:14:10\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:14:14\tICD9CM-2015-DC: 515 concepts found, but 514 kept (cros-val)\n",
      "2019-02-12 23:14:14\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_DC.gpickle saved!\n",
      "2019-02-12 23:14:14\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_DC.npz saved!\n",
      "2019-02-12 23:14:14\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_DC.csv saved!\n",
      "2019-02-12 23:14:19\tICD9CM-2015-DC: 515 concepts found, but 512 kept (cros-val)\n",
      "2019-02-12 23:14:19\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_DC.gpickle saved!\n",
      "2019-02-12 23:14:19\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_DC.npz saved!\n",
      "2019-02-12 23:14:19\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:14:23\tICD9CM-2015-DE: 1027 concepts found, but 1026 kept (cros-val)\n",
      "2019-02-12 23:14:23\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_DE.gpickle saved!\n",
      "2019-02-12 23:14:23\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_DE.npz saved!\n",
      "2019-02-12 23:14:23\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_DE.csv saved!\n",
      "2019-02-12 23:14:28\tICD9CM-2015-DE: 1027 concepts found, but 1015 kept (cros-val)\n",
      "2019-02-12 23:14:28\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_DE.gpickle saved!\n",
      "2019-02-12 23:14:28\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_DE.npz saved!\n",
      "2019-02-12 23:14:28\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:14:32\tICD9CM-2015-EX: 686 concepts found, but 685 kept (cros-val)\n",
      "2019-02-12 23:14:32\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_EX.gpickle saved!\n",
      "2019-02-12 23:14:32\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_EX.npz saved!\n",
      "2019-02-12 23:14:32\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_EX.csv saved!\n",
      "2019-02-12 23:14:36\tICD9CM-2015-EX: 686 concepts found, but 682 kept (cros-val)\n",
      "2019-02-12 23:14:37\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_EX.gpickle saved!\n",
      "2019-02-12 23:14:37\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_EX.npz saved!\n",
      "2019-02-12 23:14:37\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:14:41\tICD9CM-2015-DU: 1243 concepts found, but 1242 kept (cros-val)\n",
      "2019-02-12 23:14:41\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_DU.gpickle saved!\n",
      "2019-02-12 23:14:41\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_DU.npz saved!\n",
      "2019-02-12 23:14:41\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_DU.csv saved!\n",
      "2019-02-12 23:14:45\tICD9CM-2015-DU: 1243 concepts found, but 1241 kept (cros-val)\n",
      "2019-02-12 23:14:45\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_DU.gpickle saved!\n",
      "2019-02-12 23:14:45\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_DU.npz saved!\n",
      "2019-02-12 23:14:46\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:14:49\tICD9CM-2015-LS: 295 concepts found, but 294 kept (cros-val)\n",
      "2019-02-12 23:14:49\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_LS.gpickle saved!\n",
      "2019-02-12 23:14:49\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_LS.npz saved!\n",
      "2019-02-12 23:14:49\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_LS.csv saved!\n",
      "2019-02-12 23:14:54\tICD9CM-2015-LS: 295 concepts found, but 291 kept (cros-val)\n",
      "2019-02-12 23:14:54\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_LS.gpickle saved!\n",
      "2019-02-12 23:14:54\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_LS.npz saved!\n",
      "2019-02-12 23:14:54\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:14:58\tICD9CM-2015-ES: 75 concepts found, but 75 kept (cros-val)\n",
      "2019-02-12 23:14:58\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_ES.gpickle saved!\n",
      "2019-02-12 23:14:58\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_ES.npz saved!\n",
      "2019-02-12 23:14:58\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_ES.csv saved!\n",
      "2019-02-12 23:15:02\tICD9CM-2015-ES: 75 concepts found, but 73 kept (cros-val)\n",
      "2019-02-12 23:15:02\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_ES.gpickle saved!\n",
      "2019-02-12 23:15:02\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_ES.npz saved!\n",
      "2019-02-12 23:15:02\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:15:07\tICD9CM-2015-EL: 6 concepts found, but 6 kept (cros-val)\n",
      "2019-02-12 23:15:07\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_EL.gpickle saved!\n",
      "2019-02-12 23:15:07\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_EL.npz saved!\n",
      "2019-02-12 23:15:07\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_EL.csv saved!\n",
      "2019-02-12 23:15:11\tICD9CM-2015-EL: 6 concepts found, but 6 kept (cros-val)\n",
      "2019-02-12 23:15:11\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_EL.gpickle saved!\n",
      "2019-02-12 23:15:11\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_EL.npz saved!\n",
      "2019-02-12 23:15:11\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:15:15\tICD9CM-2015-HS: 4 concepts found, but 4 kept (cros-val)\n",
      "2019-02-12 23:15:15\t/bigdata/lespin/bioportal/transitions/graph/ICD9CM_2015_HS.gpickle saved!\n",
      "2019-02-12 23:15:15\t/bigdata/lespin/bioportal/transitions/matrix/ICD9CM_2015_HS.npz saved!\n",
      "2019-02-12 23:15:15\t/bigdata/lespin/bioportal/transitions/nodes/ICD9CM_2015_HS.csv saved!\n",
      "2019-02-12 23:15:19\tICD9CM-2015-HS: 4 concepts found, but 4 kept (cros-val)\n",
      "2019-02-12 23:15:19\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICD9CM_2015_HS.gpickle saved!\n",
      "2019-02-12 23:15:19\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICD9CM_2015_HS.npz saved!\n",
      "2019-02-12 23:15:19\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICD9CM_2015_HS.csv saved!\n",
      "130.0 all transitions (so far)\n",
      "\n",
      "93.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "LOINC\n",
      "***********************************************\n",
      "2019-02-12 23:15:31\t/bigdata/lespin/datasets/bioportal/ontologies/LOINC/9/LOINC.csv.gz loaded!\n",
      "2019-02-12 23:16:08\tConvertion LOINC-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:16:29\t/bigdata/lespin/bioportal/ontologies/graph/LOINC_2015.gpickle saved!\n",
      "2019-02-12 23:16:29\t/bigdata/lespin/bioportal/ontologies/matrix/LOINC_2015.npz saved!\n",
      "2019-02-12 23:16:30\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_LOINC_2015.npz saved!\n",
      "2019-02-12 23:16:30\t/bigdata/lespin/bioportal/ontologies/nodes/LOINC_2015.csv saved!\n",
      "2019-02-12 23:16:31\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_LOINC_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:16:39\tLOINC-2015-None: 4827 concepts found, but 4811 kept (cros-val)\n",
      "2019-02-12 23:16:39\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:16:39\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_ALL.npz saved!\n",
      "2019-02-12 23:16:39\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_ALL.csv saved!\n",
      "2019-02-12 23:16:46\tLOINC-2015-None: 4827 concepts found, but 3992 kept (cros-val)\n",
      "2019-02-12 23:16:47\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:16:47\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_ALL.npz saved!\n",
      "2019-02-12 23:16:47\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:16:56\tLOINC-2015-DC: 1100 concepts found, but 1097 kept (cros-val)\n",
      "2019-02-12 23:16:57\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_DC.gpickle saved!\n",
      "2019-02-12 23:16:57\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_DC.npz saved!\n",
      "2019-02-12 23:16:57\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_DC.csv saved!\n",
      "2019-02-12 23:17:06\tLOINC-2015-DC: 1100 concepts found, but 1084 kept (cros-val)\n",
      "2019-02-12 23:17:07\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_DC.gpickle saved!\n",
      "2019-02-12 23:17:07\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_DC.npz saved!\n",
      "2019-02-12 23:17:07\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:17:16\tLOINC-2015-DE: 2129 concepts found, but 2122 kept (cros-val)\n",
      "2019-02-12 23:17:17\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_DE.gpickle saved!\n",
      "2019-02-12 23:17:17\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_DE.npz saved!\n",
      "2019-02-12 23:17:17\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_DE.csv saved!\n",
      "2019-02-12 23:17:26\tLOINC-2015-DE: 2129 concepts found, but 1706 kept (cros-val)\n",
      "2019-02-12 23:17:26\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_DE.gpickle saved!\n",
      "2019-02-12 23:17:26\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_DE.npz saved!\n",
      "2019-02-12 23:17:26\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:17:36\tLOINC-2015-EX: 1554 concepts found, but 1546 kept (cros-val)\n",
      "2019-02-12 23:17:36\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_EX.gpickle saved!\n",
      "2019-02-12 23:17:36\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_EX.npz saved!\n",
      "2019-02-12 23:17:36\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_EX.csv saved!\n",
      "2019-02-12 23:17:46\tLOINC-2015-EX: 1554 concepts found, but 1375 kept (cros-val)\n",
      "2019-02-12 23:17:46\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_EX.gpickle saved!\n",
      "2019-02-12 23:17:46\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_EX.npz saved!\n",
      "2019-02-12 23:17:46\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:17:56\tLOINC-2015-DU: 912 concepts found, but 906 kept (cros-val)\n",
      "2019-02-12 23:17:56\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_DU.gpickle saved!\n",
      "2019-02-12 23:17:56\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_DU.npz saved!\n",
      "2019-02-12 23:17:56\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_DU.csv saved!\n",
      "2019-02-12 23:18:06\tLOINC-2015-DU: 912 concepts found, but 736 kept (cros-val)\n",
      "2019-02-12 23:18:06\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_DU.gpickle saved!\n",
      "2019-02-12 23:18:06\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_DU.npz saved!\n",
      "2019-02-12 23:18:06\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:18:16\tLOINC-2015-LS: 593 concepts found, but 590 kept (cros-val)\n",
      "2019-02-12 23:18:16\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_LS.gpickle saved!\n",
      "2019-02-12 23:18:16\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_LS.npz saved!\n",
      "2019-02-12 23:18:16\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_LS.csv saved!\n",
      "2019-02-12 23:18:26\tLOINC-2015-LS: 593 concepts found, but 353 kept (cros-val)\n",
      "2019-02-12 23:18:26\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_LS.gpickle saved!\n",
      "2019-02-12 23:18:27\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_LS.npz saved!\n",
      "2019-02-12 23:18:27\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:18:36\tLOINC-2015-ES: 617 concepts found, but 616 kept (cros-val)\n",
      "2019-02-12 23:18:37\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_ES.gpickle saved!\n",
      "2019-02-12 23:18:37\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_ES.npz saved!\n",
      "2019-02-12 23:18:37\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_ES.csv saved!\n",
      "2019-02-12 23:18:46\tLOINC-2015-ES: 617 concepts found, but 545 kept (cros-val)\n",
      "2019-02-12 23:18:46\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_ES.gpickle saved!\n",
      "2019-02-12 23:18:46\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_ES.npz saved!\n",
      "2019-02-12 23:18:46\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:18:56\tLOINC-2015-EL: 34 concepts found, but 34 kept (cros-val)\n",
      "2019-02-12 23:18:56\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_EL.gpickle saved!\n",
      "2019-02-12 23:18:56\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_EL.npz saved!\n",
      "2019-02-12 23:18:56\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_EL.csv saved!\n",
      "2019-02-12 23:19:05\tLOINC-2015-EL: 34 concepts found, but 25 kept (cros-val)\n",
      "2019-02-12 23:19:06\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_EL.gpickle saved!\n",
      "2019-02-12 23:19:06\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_EL.npz saved!\n",
      "2019-02-12 23:19:06\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:19:15\tLOINC-2015-HS: 24 concepts found, but 24 kept (cros-val)\n",
      "2019-02-12 23:19:15\t/bigdata/lespin/bioportal/transitions/graph/LOINC_2015_HS.gpickle saved!\n",
      "2019-02-12 23:19:15\t/bigdata/lespin/bioportal/transitions/matrix/LOINC_2015_HS.npz saved!\n",
      "2019-02-12 23:19:15\t/bigdata/lespin/bioportal/transitions/nodes/LOINC_2015_HS.csv saved!\n",
      "2019-02-12 23:19:25\tLOINC-2015-HS: 24 concepts found, but 11 kept (cros-val)\n",
      "2019-02-12 23:19:26\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/LOINC_2015_HS.gpickle saved!\n",
      "2019-02-12 23:19:26\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/LOINC_2015_HS.npz saved!\n",
      "2019-02-12 23:19:26\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/LOINC_2015_HS.csv saved!\n",
      "145.0 all transitions (so far)\n",
      "\n",
      "95.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "EDAM\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/EDAM/29\n",
      "145.0 all transitions (so far)\n",
      "\n",
      "95.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "MA\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/MA/35\n",
      "145.0 all transitions (so far)\n",
      "\n",
      "95.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "DOID\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/DOID/559\n",
      "145.0 all transitions (so far)\n",
      "\n",
      "95.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "MESH\n",
      "***********************************************\n",
      "2019-02-12 23:19:33\t/bigdata/lespin/datasets/bioportal/ontologies/MESH/10/MESH.csv.gz loaded!\n",
      "2019-02-12 23:20:11\tConvertion MESH-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:20:29\t/bigdata/lespin/bioportal/ontologies/graph/MESH_2015.gpickle saved!\n",
      "2019-02-12 23:20:29\t/bigdata/lespin/bioportal/ontologies/matrix/MESH_2015.npz saved!\n",
      "2019-02-12 23:20:29\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_MESH_2015.npz saved!\n",
      "2019-02-12 23:20:30\t/bigdata/lespin/bioportal/ontologies/nodes/MESH_2015.csv saved!\n",
      "2019-02-12 23:20:30\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_MESH_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:20:37\tMESH-2015-None: 3637 concepts found, but 2836 kept (cros-val)\n",
      "2019-02-12 23:20:37\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:20:37\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_ALL.npz saved!\n",
      "2019-02-12 23:20:37\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_ALL.csv saved!\n",
      "2019-02-12 23:20:45\tMESH-2015-None: 3637 concepts found, but 1993 kept (cros-val)\n",
      "2019-02-12 23:20:45\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:20:45\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_ALL.npz saved!\n",
      "2019-02-12 23:20:45\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:20:55\tMESH-2015-DC: 311 concepts found, but 269 kept (cros-val)\n",
      "2019-02-12 23:20:55\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_DC.gpickle saved!\n",
      "2019-02-12 23:20:55\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_DC.npz saved!\n",
      "2019-02-12 23:20:55\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_DC.csv saved!\n",
      "2019-02-12 23:21:04\tMESH-2015-DC: 311 concepts found, but 225 kept (cros-val)\n",
      "2019-02-12 23:21:04\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_DC.gpickle saved!\n",
      "2019-02-12 23:21:04\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_DC.npz saved!\n",
      "2019-02-12 23:21:04\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:21:12\tMESH-2015-DE: 956 concepts found, but 748 kept (cros-val)\n",
      "2019-02-12 23:21:12\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_DE.gpickle saved!\n",
      "2019-02-12 23:21:12\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_DE.npz saved!\n",
      "2019-02-12 23:21:12\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_DE.csv saved!\n",
      "2019-02-12 23:21:21\tMESH-2015-DE: 956 concepts found, but 522 kept (cros-val)\n",
      "2019-02-12 23:21:21\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_DE.gpickle saved!\n",
      "2019-02-12 23:21:21\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_DE.npz saved!\n",
      "2019-02-12 23:21:21\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:21:30\tMESH-2015-EX: 1014 concepts found, but 961 kept (cros-val)\n",
      "2019-02-12 23:21:30\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_EX.gpickle saved!\n",
      "2019-02-12 23:21:30\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_EX.npz saved!\n",
      "2019-02-12 23:21:30\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_EX.csv saved!\n",
      "2019-02-12 23:21:39\tMESH-2015-EX: 1014 concepts found, but 801 kept (cros-val)\n",
      "2019-02-12 23:21:39\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_EX.gpickle saved!\n",
      "2019-02-12 23:21:39\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_EX.npz saved!\n",
      "2019-02-12 23:21:39\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:21:48\tMESH-2015-DU: 1631 concepts found, but 1204 kept (cros-val)\n",
      "2019-02-12 23:21:48\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_DU.gpickle saved!\n",
      "2019-02-12 23:21:48\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_DU.npz saved!\n",
      "2019-02-12 23:21:48\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_DU.csv saved!\n",
      "2019-02-12 23:21:56\tMESH-2015-DU: 1631 concepts found, but 787 kept (cros-val)\n",
      "2019-02-12 23:21:57\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_DU.gpickle saved!\n",
      "2019-02-12 23:21:57\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_DU.npz saved!\n",
      "2019-02-12 23:21:57\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:22:05\tMESH-2015-LS: 681 concepts found, but 519 kept (cros-val)\n",
      "2019-02-12 23:22:05\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_LS.gpickle saved!\n",
      "2019-02-12 23:22:05\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_LS.npz saved!\n",
      "2019-02-12 23:22:05\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_LS.csv saved!\n",
      "2019-02-12 23:22:13\tMESH-2015-LS: 681 concepts found, but 363 kept (cros-val)\n",
      "2019-02-12 23:22:13\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_LS.gpickle saved!\n",
      "2019-02-12 23:22:13\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_LS.npz saved!\n",
      "2019-02-12 23:22:13\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:22:21\tMESH-2015-ES: 119 concepts found, but 81 kept (cros-val)\n",
      "2019-02-12 23:22:22\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_ES.gpickle saved!\n",
      "2019-02-12 23:22:22\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_ES.npz saved!\n",
      "2019-02-12 23:22:22\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_ES.csv saved!\n",
      "2019-02-12 23:22:30\tMESH-2015-ES: 119 concepts found, but 36 kept (cros-val)\n",
      "2019-02-12 23:22:30\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_ES.gpickle saved!\n",
      "2019-02-12 23:22:30\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_ES.npz saved!\n",
      "2019-02-12 23:22:30\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:22:38\tMESH-2015-EL: 85 concepts found, but 64 kept (cros-val)\n",
      "2019-02-12 23:22:39\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_EL.gpickle saved!\n",
      "2019-02-12 23:22:39\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_EL.npz saved!\n",
      "2019-02-12 23:22:39\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_EL.csv saved!\n",
      "2019-02-12 23:22:47\tMESH-2015-EL: 85 concepts found, but 52 kept (cros-val)\n",
      "2019-02-12 23:22:47\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_EL.gpickle saved!\n",
      "2019-02-12 23:22:47\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_EL.npz saved!\n",
      "2019-02-12 23:22:47\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:22:54\tMESH-2015-HS: 41 concepts found, but 30 kept (cros-val)\n",
      "2019-02-12 23:22:54\t/bigdata/lespin/bioportal/transitions/graph/MESH_2015_HS.gpickle saved!\n",
      "2019-02-12 23:22:54\t/bigdata/lespin/bioportal/transitions/matrix/MESH_2015_HS.npz saved!\n",
      "2019-02-12 23:22:54\t/bigdata/lespin/bioportal/transitions/nodes/MESH_2015_HS.csv saved!\n",
      "2019-02-12 23:23:02\tMESH-2015-HS: 41 concepts found, but 22 kept (cros-val)\n",
      "2019-02-12 23:23:02\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MESH_2015_HS.gpickle saved!\n",
      "2019-02-12 23:23:02\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MESH_2015_HS.npz saved!\n",
      "2019-02-12 23:23:02\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MESH_2015_HS.csv saved!\n",
      "158.0 all transitions (so far)\n",
      "\n",
      "103.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "NDFRT\n",
      "***********************************************\n",
      "2019-02-12 23:23:04\t/bigdata/lespin/datasets/bioportal/ontologies/NDFRT/7/NDFRT.csv.gz loaded!\n",
      "2019-02-12 23:23:11\tConvertion NDFRT-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:23:14\t/bigdata/lespin/bioportal/ontologies/graph/NDFRT_2015.gpickle saved!\n",
      "2019-02-12 23:23:14\t/bigdata/lespin/bioportal/ontologies/matrix/NDFRT_2015.npz saved!\n",
      "2019-02-12 23:23:15\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_NDFRT_2015.npz saved!\n",
      "2019-02-12 23:23:15\t/bigdata/lespin/bioportal/ontologies/nodes/NDFRT_2015.csv saved!\n",
      "2019-02-12 23:23:15\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_NDFRT_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:23:33\tNDFRT-2015-None: 12959 concepts found, but 12836 kept (cros-val)\n",
      "2019-02-12 23:23:33\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:23:33\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_ALL.npz saved!\n",
      "2019-02-12 23:23:33\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_ALL.csv saved!\n",
      "2019-02-12 23:23:50\tNDFRT-2015-None: 12959 concepts found, but 11906 kept (cros-val)\n",
      "2019-02-12 23:23:51\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:23:51\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_ALL.npz saved!\n",
      "2019-02-12 23:23:51\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:24:08\tNDFRT-2015-DC: 1266 concepts found, but 1226 kept (cros-val)\n",
      "2019-02-12 23:24:08\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_DC.gpickle saved!\n",
      "2019-02-12 23:24:08\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_DC.npz saved!\n",
      "2019-02-12 23:24:08\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_DC.csv saved!\n",
      "2019-02-12 23:24:25\tNDFRT-2015-DC: 1266 concepts found, but 1177 kept (cros-val)\n",
      "2019-02-12 23:24:25\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_DC.gpickle saved!\n",
      "2019-02-12 23:24:26\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_DC.npz saved!\n",
      "2019-02-12 23:24:26\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:24:42\tNDFRT-2015-DE: 3196 concepts found, but 3125 kept (cros-val)\n",
      "2019-02-12 23:24:43\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_DE.gpickle saved!\n",
      "2019-02-12 23:24:43\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_DE.npz saved!\n",
      "2019-02-12 23:24:43\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_DE.csv saved!\n",
      "2019-02-12 23:25:00\tNDFRT-2015-DE: 3196 concepts found, but 2866 kept (cros-val)\n",
      "2019-02-12 23:25:01\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_DE.gpickle saved!\n",
      "2019-02-12 23:25:01\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_DE.npz saved!\n",
      "2019-02-12 23:25:01\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:25:18\tNDFRT-2015-EX: 9569 concepts found, but 9560 kept (cros-val)\n",
      "2019-02-12 23:25:18\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_EX.gpickle saved!\n",
      "2019-02-12 23:25:18\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_EX.npz saved!\n",
      "2019-02-12 23:25:18\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_EX.csv saved!\n",
      "2019-02-12 23:25:35\tNDFRT-2015-EX: 9569 concepts found, but 8875 kept (cros-val)\n",
      "2019-02-12 23:25:36\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_EX.gpickle saved!\n",
      "2019-02-12 23:25:36\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_EX.npz saved!\n",
      "2019-02-12 23:25:36\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:25:53\tNDFRT-2015-DU: 2108 concepts found, but 2085 kept (cros-val)\n",
      "2019-02-12 23:25:53\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_DU.gpickle saved!\n",
      "2019-02-12 23:25:53\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_DU.npz saved!\n",
      "2019-02-12 23:25:53\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_DU.csv saved!\n",
      "2019-02-12 23:26:11\tNDFRT-2015-DU: 2108 concepts found, but 1994 kept (cros-val)\n",
      "2019-02-12 23:26:12\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_DU.gpickle saved!\n",
      "2019-02-12 23:26:12\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_DU.npz saved!\n",
      "2019-02-12 23:26:12\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:26:30\tNDFRT-2015-LS: 1214 concepts found, but 1205 kept (cros-val)\n",
      "2019-02-12 23:26:30\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_LS.gpickle saved!\n",
      "2019-02-12 23:26:30\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_LS.npz saved!\n",
      "2019-02-12 23:26:30\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_LS.csv saved!\n",
      "2019-02-12 23:26:49\tNDFRT-2015-LS: 1214 concepts found, but 1133 kept (cros-val)\n",
      "2019-02-12 23:26:49\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_LS.gpickle saved!\n",
      "2019-02-12 23:26:49\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_LS.npz saved!\n",
      "2019-02-12 23:26:49\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:27:06\tNDFRT-2015-ES: 652 concepts found, but 628 kept (cros-val)\n",
      "2019-02-12 23:27:06\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_ES.gpickle saved!\n",
      "2019-02-12 23:27:06\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_ES.npz saved!\n",
      "2019-02-12 23:27:06\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_ES.csv saved!\n",
      "2019-02-12 23:27:23\tNDFRT-2015-ES: 652 concepts found, but 579 kept (cros-val)\n",
      "2019-02-12 23:27:23\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_ES.gpickle saved!\n",
      "2019-02-12 23:27:23\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_ES.npz saved!\n",
      "2019-02-12 23:27:23\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:27:40\tNDFRT-2015-EL: 39 concepts found, but 39 kept (cros-val)\n",
      "2019-02-12 23:27:40\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_EL.gpickle saved!\n",
      "2019-02-12 23:27:40\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_EL.npz saved!\n",
      "2019-02-12 23:27:40\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_EL.csv saved!\n",
      "2019-02-12 23:27:57\tNDFRT-2015-EL: 39 concepts found, but 37 kept (cros-val)\n",
      "2019-02-12 23:27:57\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_EL.gpickle saved!\n",
      "2019-02-12 23:27:57\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_EL.npz saved!\n",
      "2019-02-12 23:27:57\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:28:13\tNDFRT-2015-HS: 7 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 23:28:13\t/bigdata/lespin/bioportal/transitions/graph/NDFRT_2015_HS.gpickle saved!\n",
      "2019-02-12 23:28:13\t/bigdata/lespin/bioportal/transitions/matrix/NDFRT_2015_HS.npz saved!\n",
      "2019-02-12 23:28:13\t/bigdata/lespin/bioportal/transitions/nodes/NDFRT_2015_HS.csv saved!\n",
      "2019-02-12 23:28:34\tNDFRT-2015-HS: 7 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 23:28:34\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/NDFRT_2015_HS.gpickle saved!\n",
      "2019-02-12 23:28:34\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/NDFRT_2015_HS.npz saved!\n",
      "2019-02-12 23:28:34\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/NDFRT_2015_HS.csv saved!\n",
      "162.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "OMIM\n",
      "***********************************************\n",
      "2019-02-12 23:28:36\t/bigdata/lespin/datasets/bioportal/ontologies/OMIM/8/OMIM.csv.gz loaded!\n",
      "2019-02-12 23:28:57\tConvertion OMIM-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:29:06\t/bigdata/lespin/bioportal/ontologies/graph/OMIM_2015.gpickle saved!\n",
      "2019-02-12 23:29:06\t/bigdata/lespin/bioportal/ontologies/matrix/OMIM_2015.npz saved!\n",
      "2019-02-12 23:29:06\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_OMIM_2015.npz saved!\n",
      "2019-02-12 23:29:07\t/bigdata/lespin/bioportal/ontologies/nodes/OMIM_2015.csv saved!\n",
      "2019-02-12 23:29:07\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_OMIM_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:29:22\tOMIM-2015-None: 4870 concepts found, but 4866 kept (cros-val)\n",
      "2019-02-12 23:29:23\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:29:23\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_ALL.npz saved!\n",
      "2019-02-12 23:29:23\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_ALL.csv saved!\n",
      "2019-02-12 23:29:39\tOMIM-2015-None: 4870 concepts found, but 895 kept (cros-val)\n",
      "2019-02-12 23:29:39\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:29:39\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_ALL.npz saved!\n",
      "2019-02-12 23:29:40\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:29:56\tOMIM-2015-DC: 163 concepts found, but 163 kept (cros-val)\n",
      "2019-02-12 23:29:56\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_DC.gpickle saved!\n",
      "2019-02-12 23:29:56\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_DC.npz saved!\n",
      "2019-02-12 23:29:56\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_DC.csv saved!\n",
      "2019-02-12 23:30:12\tOMIM-2015-DC: 163 concepts found, but 147 kept (cros-val)\n",
      "2019-02-12 23:30:12\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_DC.gpickle saved!\n",
      "2019-02-12 23:30:12\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_DC.npz saved!\n",
      "2019-02-12 23:30:12\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:30:28\tOMIM-2015-DE: 808 concepts found, but 806 kept (cros-val)\n",
      "2019-02-12 23:30:28\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_DE.gpickle saved!\n",
      "2019-02-12 23:30:28\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_DE.npz saved!\n",
      "2019-02-12 23:30:28\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_DE.csv saved!\n",
      "2019-02-12 23:30:45\tOMIM-2015-DE: 808 concepts found, but 522 kept (cros-val)\n",
      "2019-02-12 23:30:45\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_DE.gpickle saved!\n",
      "2019-02-12 23:30:45\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_DE.npz saved!\n",
      "2019-02-12 23:30:45\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:31:01\tOMIM-2015-EX: 161 concepts found, but 160 kept (cros-val)\n",
      "2019-02-12 23:31:01\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_EX.gpickle saved!\n",
      "2019-02-12 23:31:01\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_EX.npz saved!\n",
      "2019-02-12 23:31:01\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_EX.csv saved!\n",
      "2019-02-12 23:31:17\tOMIM-2015-EX: 161 concepts found, but 114 kept (cros-val)\n",
      "2019-02-12 23:31:17\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_EX.gpickle saved!\n",
      "2019-02-12 23:31:17\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_EX.npz saved!\n",
      "2019-02-12 23:31:17\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:31:33\tOMIM-2015-DU: 4090 concepts found, but 4087 kept (cros-val)\n",
      "2019-02-12 23:31:33\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_DU.gpickle saved!\n",
      "2019-02-12 23:31:33\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_DU.npz saved!\n",
      "2019-02-12 23:31:33\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_DU.csv saved!\n",
      "2019-02-12 23:31:49\tOMIM-2015-DU: 4090 concepts found, but 280 kept (cros-val)\n",
      "2019-02-12 23:31:49\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_DU.gpickle saved!\n",
      "2019-02-12 23:31:49\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_DU.npz saved!\n",
      "2019-02-12 23:31:49\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:32:05\tOMIM-2015-LS: 144 concepts found, but 143 kept (cros-val)\n",
      "2019-02-12 23:32:05\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_LS.gpickle saved!\n",
      "2019-02-12 23:32:05\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_LS.npz saved!\n",
      "2019-02-12 23:32:05\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_LS.csv saved!\n",
      "2019-02-12 23:32:20\tOMIM-2015-LS: 144 concepts found, but 72 kept (cros-val)\n",
      "2019-02-12 23:32:21\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_LS.gpickle saved!\n",
      "2019-02-12 23:32:21\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_LS.npz saved!\n",
      "2019-02-12 23:32:21\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:32:36\tOMIM-2015-ES: 67 concepts found, but 66 kept (cros-val)\n",
      "2019-02-12 23:32:37\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_ES.gpickle saved!\n",
      "2019-02-12 23:32:37\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_ES.npz saved!\n",
      "2019-02-12 23:32:37\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_ES.csv saved!\n",
      "2019-02-12 23:32:53\tOMIM-2015-ES: 67 concepts found, but 47 kept (cros-val)\n",
      "2019-02-12 23:32:53\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_ES.gpickle saved!\n",
      "2019-02-12 23:32:53\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_ES.npz saved!\n",
      "2019-02-12 23:32:53\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:33:08\tOMIM-2015-EL: 38 concepts found, but 38 kept (cros-val)\n",
      "2019-02-12 23:33:08\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_EL.gpickle saved!\n",
      "2019-02-12 23:33:08\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_EL.npz saved!\n",
      "2019-02-12 23:33:08\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_EL.csv saved!\n",
      "2019-02-12 23:33:24\tOMIM-2015-EL: 38 concepts found, but 16 kept (cros-val)\n",
      "2019-02-12 23:33:25\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_EL.gpickle saved!\n",
      "2019-02-12 23:33:25\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_EL.npz saved!\n",
      "2019-02-12 23:33:25\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:33:40\tOMIM-2015-HS: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:33:40\t/bigdata/lespin/bioportal/transitions/graph/OMIM_2015_HS.gpickle saved!\n",
      "2019-02-12 23:33:40\t/bigdata/lespin/bioportal/transitions/matrix/OMIM_2015_HS.npz saved!\n",
      "2019-02-12 23:33:40\t/bigdata/lespin/bioportal/transitions/nodes/OMIM_2015_HS.csv saved!\n",
      "2019-02-12 23:33:56\tOMIM-2015-HS: 2 concepts found, but 1 kept (cros-val)\n",
      "2019-02-12 23:33:56\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/OMIM_2015_HS.gpickle saved!\n",
      "2019-02-12 23:33:56\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/OMIM_2015_HS.npz saved!\n",
      "2019-02-12 23:33:56\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/OMIM_2015_HS.csv saved!\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "SNMI\n",
      "***********************************************\n",
      "2019-02-12 23:33:57\t/bigdata/lespin/datasets/bioportal/ontologies/SNMI/6/SNMI.csv.gz loaded!\n",
      "2019-02-12 23:34:06\tConvertion SNMI-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:34:10\t/bigdata/lespin/bioportal/ontologies/graph/SNMI_2015.gpickle saved!\n",
      "2019-02-12 23:34:10\t/bigdata/lespin/bioportal/ontologies/matrix/SNMI_2015.npz saved!\n",
      "2019-02-12 23:34:10\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_SNMI_2015.npz saved!\n",
      "2019-02-12 23:34:11\t/bigdata/lespin/bioportal/ontologies/nodes/SNMI_2015.csv saved!\n",
      "2019-02-12 23:34:11\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_SNMI_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:34:14\tSNMI-2015-None: 5078 concepts found, but 4487 kept (cros-val)\n",
      "2019-02-12 23:34:14\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:34:14\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_ALL.npz saved!\n",
      "2019-02-12 23:34:14\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_ALL.csv saved!\n",
      "2019-02-12 23:34:17\tSNMI-2015-None: 5078 concepts found, but 236 kept (cros-val)\n",
      "2019-02-12 23:34:17\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:34:17\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_ALL.npz saved!\n",
      "2019-02-12 23:34:17\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:34:20\tSNMI-2015-DC: 172 concepts found, but 102 kept (cros-val)\n",
      "2019-02-12 23:34:20\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_DC.gpickle saved!\n",
      "2019-02-12 23:34:20\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_DC.npz saved!\n",
      "2019-02-12 23:34:20\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_DC.csv saved!\n",
      "2019-02-12 23:34:24\tSNMI-2015-DC: 172 concepts found, but 10 kept (cros-val)\n",
      "2019-02-12 23:34:24\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_DC.gpickle saved!\n",
      "2019-02-12 23:34:24\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_DC.npz saved!\n",
      "2019-02-12 23:34:24\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:34:27\tSNMI-2015-DE: 272 concepts found, but 178 kept (cros-val)\n",
      "2019-02-12 23:34:27\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_DE.gpickle saved!\n",
      "2019-02-12 23:34:27\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_DE.npz saved!\n",
      "2019-02-12 23:34:27\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_DE.csv saved!\n",
      "2019-02-12 23:34:31\tSNMI-2015-DE: 272 concepts found, but 31 kept (cros-val)\n",
      "2019-02-12 23:34:31\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_DE.gpickle saved!\n",
      "2019-02-12 23:34:31\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_DE.npz saved!\n",
      "2019-02-12 23:34:31\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:34:34\tSNMI-2015-EX: 4606 concepts found, but 4300 kept (cros-val)\n",
      "2019-02-12 23:34:34\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_EX.gpickle saved!\n",
      "2019-02-12 23:34:34\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_EX.npz saved!\n",
      "2019-02-12 23:34:34\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_EX.csv saved!\n",
      "2019-02-12 23:34:37\tSNMI-2015-EX: 4606 concepts found, but 221 kept (cros-val)\n",
      "2019-02-12 23:34:37\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_EX.gpickle saved!\n",
      "2019-02-12 23:34:37\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_EX.npz saved!\n",
      "2019-02-12 23:34:37\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:34:40\tSNMI-2015-DU: 175 concepts found, but 68 kept (cros-val)\n",
      "2019-02-12 23:34:40\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_DU.gpickle saved!\n",
      "2019-02-12 23:34:40\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_DU.npz saved!\n",
      "2019-02-12 23:34:40\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_DU.csv saved!\n",
      "2019-02-12 23:34:43\tSNMI-2015-DU: 175 concepts found, but 1 kept (cros-val)\n",
      "2019-02-12 23:34:43\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_DU.gpickle saved!\n",
      "2019-02-12 23:34:43\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_DU.npz saved!\n",
      "2019-02-12 23:34:43\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:34:46\tSNMI-2015-LS: 114 concepts found, but 57 kept (cros-val)\n",
      "2019-02-12 23:34:46\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_LS.gpickle saved!\n",
      "2019-02-12 23:34:46\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_LS.npz saved!\n",
      "2019-02-12 23:34:46\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_LS.csv saved!\n",
      "2019-02-12 23:34:49\tSNMI-2015-LS: 114 concepts found, but 4 kept (cros-val)\n",
      "2019-02-12 23:34:49\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_LS.gpickle saved!\n",
      "2019-02-12 23:34:49\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_LS.npz saved!\n",
      "2019-02-12 23:34:49\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:34:52\tSNMI-2015-ES: 10 concepts found, but 6 kept (cros-val)\n",
      "2019-02-12 23:34:53\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_ES.gpickle saved!\n",
      "2019-02-12 23:34:53\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_ES.npz saved!\n",
      "2019-02-12 23:34:53\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_ES.csv saved!\n",
      "2019-02-12 23:34:56\tSNMI-2015-ES: 10 concepts found, but 1 kept (cros-val)\n",
      "2019-02-12 23:34:56\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_ES.gpickle saved!\n",
      "2019-02-12 23:34:56\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_ES.npz saved!\n",
      "2019-02-12 23:34:56\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:34:59\tSNMI-2015-EL: 9 concepts found, but 5 kept (cros-val)\n",
      "2019-02-12 23:34:59\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_EL.gpickle saved!\n",
      "2019-02-12 23:34:59\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_EL.npz saved!\n",
      "2019-02-12 23:34:59\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_EL.csv saved!\n",
      "2019-02-12 23:35:02\tSNMI-2015-EL: 9 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:02\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_EL.gpickle saved!\n",
      "2019-02-12 23:35:02\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_EL.npz saved!\n",
      "2019-02-12 23:35:02\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:35:05\tSNMI-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:05\t/bigdata/lespin/bioportal/transitions/graph/SNMI_2015_HS.gpickle saved!\n",
      "2019-02-12 23:35:05\t/bigdata/lespin/bioportal/transitions/matrix/SNMI_2015_HS.npz saved!\n",
      "2019-02-12 23:35:05\t/bigdata/lespin/bioportal/transitions/nodes/SNMI_2015_HS.csv saved!\n",
      "2019-02-12 23:35:09\tSNMI-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/SNMI_2015_HS.gpickle saved!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/SNMI_2015_HS.npz saved!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/SNMI_2015_HS.csv saved!\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "CTCAE\n",
      "***********************************************\n",
      "'2015'\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "NCBITAXON\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/NCBITAXON/5\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "HP\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/HP/556\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ICF\n",
      "***********************************************\n",
      "'2015'\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "MS\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/MS/106\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "UBERON\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/UBERON/238\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "CL\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/CL/58\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "MAMO\n",
      "***********************************************\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/datasets/bioportal/ontologies/MAMO/14/MAMO.csv.gz loaded!\n",
      "2019-02-12 23:35:09\tConvertion MAMO-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/ontologies/graph/MAMO_2015.gpickle saved!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/ontologies/matrix/MAMO_2015.npz saved!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_MAMO_2015.npz saved!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/ontologies/nodes/MAMO_2015.csv saved!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_MAMO_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:35:09\tMAMO-2015-None: 78 concepts found, but 76 kept (cros-val)\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_ALL.npz saved!\n",
      "2019-02-12 23:35:09\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_ALL.csv saved!\n",
      "2019-02-12 23:35:10\tMAMO-2015-None: 78 concepts found, but 76 kept (cros-val)\n",
      "2019-02-12 23:35:10\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:35:10\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_ALL.npz saved!\n",
      "2019-02-12 23:35:10\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:35:11\tMAMO-2015-DC: 62 concepts found, but 62 kept (cros-val)\n",
      "2019-02-12 23:35:11\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_DC.gpickle saved!\n",
      "2019-02-12 23:35:11\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_DC.npz saved!\n",
      "2019-02-12 23:35:11\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_DC.csv saved!\n",
      "2019-02-12 23:35:11\tMAMO-2015-DC: 62 concepts found, but 62 kept (cros-val)\n",
      "2019-02-12 23:35:11\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_DC.gpickle saved!\n",
      "2019-02-12 23:35:11\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_DC.npz saved!\n",
      "2019-02-12 23:35:11\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:35:12\tMAMO-2015-DE: 57 concepts found, but 55 kept (cros-val)\n",
      "2019-02-12 23:35:12\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_DE.gpickle saved!\n",
      "2019-02-12 23:35:12\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_DE.npz saved!\n",
      "2019-02-12 23:35:12\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_DE.csv saved!\n",
      "2019-02-12 23:35:12\tMAMO-2015-DE: 57 concepts found, but 55 kept (cros-val)\n",
      "2019-02-12 23:35:12\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_DE.gpickle saved!\n",
      "2019-02-12 23:35:12\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_DE.npz saved!\n",
      "2019-02-12 23:35:12\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:35:13\tMAMO-2015-EX: 60 concepts found, but 58 kept (cros-val)\n",
      "2019-02-12 23:35:13\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_EX.gpickle saved!\n",
      "2019-02-12 23:35:13\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_EX.npz saved!\n",
      "2019-02-12 23:35:13\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_EX.csv saved!\n",
      "2019-02-12 23:35:13\tMAMO-2015-EX: 60 concepts found, but 58 kept (cros-val)\n",
      "2019-02-12 23:35:13\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_EX.gpickle saved!\n",
      "2019-02-12 23:35:13\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_EX.npz saved!\n",
      "2019-02-12 23:35:13\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:35:14\tMAMO-2015-DU: 8 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 23:35:14\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_DU.gpickle saved!\n",
      "2019-02-12 23:35:14\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_DU.npz saved!\n",
      "2019-02-12 23:35:14\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_DU.csv saved!\n",
      "2019-02-12 23:35:15\tMAMO-2015-DU: 8 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 23:35:15\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_DU.gpickle saved!\n",
      "2019-02-12 23:35:15\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_DU.npz saved!\n",
      "2019-02-12 23:35:15\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:35:15\tMAMO-2015-LS: 13 concepts found, but 12 kept (cros-val)\n",
      "2019-02-12 23:35:15\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_LS.gpickle saved!\n",
      "2019-02-12 23:35:15\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_LS.npz saved!\n",
      "2019-02-12 23:35:15\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_LS.csv saved!\n",
      "2019-02-12 23:35:16\tMAMO-2015-LS: 13 concepts found, but 12 kept (cros-val)\n",
      "2019-02-12 23:35:16\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_LS.gpickle saved!\n",
      "2019-02-12 23:35:16\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_LS.npz saved!\n",
      "2019-02-12 23:35:16\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:35:16\tMAMO-2015-ES: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:16\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_ES.gpickle saved!\n",
      "2019-02-12 23:35:16\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_ES.npz saved!\n",
      "2019-02-12 23:35:16\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_ES.csv saved!\n",
      "2019-02-12 23:35:17\tMAMO-2015-ES: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:17\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_ES.gpickle saved!\n",
      "2019-02-12 23:35:17\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_ES.npz saved!\n",
      "2019-02-12 23:35:17\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:35:17\tMAMO-2015-EL: 5 concepts found, but 4 kept (cros-val)\n",
      "2019-02-12 23:35:17\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_EL.gpickle saved!\n",
      "2019-02-12 23:35:17\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_EL.npz saved!\n",
      "2019-02-12 23:35:17\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_EL.csv saved!\n",
      "2019-02-12 23:35:18\tMAMO-2015-EL: 5 concepts found, but 4 kept (cros-val)\n",
      "2019-02-12 23:35:18\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_EL.gpickle saved!\n",
      "2019-02-12 23:35:18\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_EL.npz saved!\n",
      "2019-02-12 23:35:18\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:35:18\tMAMO-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:18\t/bigdata/lespin/bioportal/transitions/graph/MAMO_2015_HS.gpickle saved!\n",
      "2019-02-12 23:35:18\t/bigdata/lespin/bioportal/transitions/matrix/MAMO_2015_HS.npz saved!\n",
      "2019-02-12 23:35:18\t/bigdata/lespin/bioportal/transitions/nodes/MAMO_2015_HS.csv saved!\n",
      "2019-02-12 23:35:19\tMAMO-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/MAMO_2015_HS.gpickle saved!\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/MAMO_2015_HS.npz saved!\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/MAMO_2015_HS.csv saved!\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "GO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/GO/1550\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "SCTSPA\n",
      "***********************************************\n",
      "'SCTSPA'\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ICPC\n",
      "***********************************************\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/datasets/bioportal/ontologies/ICPC/6/ICPC.csv.gz loaded!\n",
      "2019-02-12 23:35:19\tConvertion ICPC-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/bioportal/ontologies/graph/ICPC_2015.gpickle saved!\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/bioportal/ontologies/matrix/ICPC_2015.npz saved!\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_ICPC_2015.npz saved!\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/bioportal/ontologies/nodes/ICPC_2015.csv saved!\n",
      "2019-02-12 23:35:19\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_ICPC_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:35:21\tICPC-2015-None: 220 concepts found, but 218 kept (cros-val)\n",
      "2019-02-12 23:35:21\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:35:21\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_ALL.npz saved!\n",
      "2019-02-12 23:35:21\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_ALL.csv saved!\n",
      "2019-02-12 23:35:22\tICPC-2015-None: 220 concepts found, but 206 kept (cros-val)\n",
      "2019-02-12 23:35:22\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:35:22\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_ALL.npz saved!\n",
      "2019-02-12 23:35:22\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:35:22\tICPC-2015-DC: 86 concepts found, but 86 kept (cros-val)\n",
      "2019-02-12 23:35:22\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_DC.gpickle saved!\n",
      "2019-02-12 23:35:22\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_DC.npz saved!\n",
      "2019-02-12 23:35:22\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_DC.csv saved!\n",
      "2019-02-12 23:35:23\tICPC-2015-DC: 86 concepts found, but 84 kept (cros-val)\n",
      "2019-02-12 23:35:23\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_DC.gpickle saved!\n",
      "2019-02-12 23:35:23\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_DC.npz saved!\n",
      "2019-02-12 23:35:23\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:35:24\tICPC-2015-DE: 111 concepts found, but 111 kept (cros-val)\n",
      "2019-02-12 23:35:24\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_DE.gpickle saved!\n",
      "2019-02-12 23:35:24\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_DE.npz saved!\n",
      "2019-02-12 23:35:24\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_DE.csv saved!\n",
      "2019-02-12 23:35:25\tICPC-2015-DE: 111 concepts found, but 104 kept (cros-val)\n",
      "2019-02-12 23:35:25\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_DE.gpickle saved!\n",
      "2019-02-12 23:35:25\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_DE.npz saved!\n",
      "2019-02-12 23:35:25\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:35:26\tICPC-2015-EX: 53 concepts found, but 52 kept (cros-val)\n",
      "2019-02-12 23:35:26\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_EX.gpickle saved!\n",
      "2019-02-12 23:35:26\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_EX.npz saved!\n",
      "2019-02-12 23:35:26\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_EX.csv saved!\n",
      "2019-02-12 23:35:27\tICPC-2015-EX: 53 concepts found, but 49 kept (cros-val)\n",
      "2019-02-12 23:35:27\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_EX.gpickle saved!\n",
      "2019-02-12 23:35:27\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_EX.npz saved!\n",
      "2019-02-12 23:35:27\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:35:27\tICPC-2015-DU: 55 concepts found, but 55 kept (cros-val)\n",
      "2019-02-12 23:35:27\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_DU.gpickle saved!\n",
      "2019-02-12 23:35:27\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_DU.npz saved!\n",
      "2019-02-12 23:35:27\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_DU.csv saved!\n",
      "2019-02-12 23:35:28\tICPC-2015-DU: 55 concepts found, but 54 kept (cros-val)\n",
      "2019-02-12 23:35:28\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_DU.gpickle saved!\n",
      "2019-02-12 23:35:28\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_DU.npz saved!\n",
      "2019-02-12 23:35:28\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:35:29\tICPC-2015-LS: 51 concepts found, but 49 kept (cros-val)\n",
      "2019-02-12 23:35:29\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_LS.gpickle saved!\n",
      "2019-02-12 23:35:29\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_LS.npz saved!\n",
      "2019-02-12 23:35:29\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_LS.csv saved!\n",
      "2019-02-12 23:35:30\tICPC-2015-LS: 51 concepts found, but 43 kept (cros-val)\n",
      "2019-02-12 23:35:30\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_LS.gpickle saved!\n",
      "2019-02-12 23:35:30\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_LS.npz saved!\n",
      "2019-02-12 23:35:30\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:35:31\tICPC-2015-ES: 20 concepts found, but 20 kept (cros-val)\n",
      "2019-02-12 23:35:31\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_ES.gpickle saved!\n",
      "2019-02-12 23:35:31\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_ES.npz saved!\n",
      "2019-02-12 23:35:31\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_ES.csv saved!\n",
      "2019-02-12 23:35:31\tICPC-2015-ES: 20 concepts found, but 19 kept (cros-val)\n",
      "2019-02-12 23:35:31\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_ES.gpickle saved!\n",
      "2019-02-12 23:35:31\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_ES.npz saved!\n",
      "2019-02-12 23:35:31\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:35:32\tICPC-2015-EL: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:35:32\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_EL.gpickle saved!\n",
      "2019-02-12 23:35:32\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_EL.npz saved!\n",
      "2019-02-12 23:35:32\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_EL.csv saved!\n",
      "2019-02-12 23:35:33\tICPC-2015-EL: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:35:33\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_EL.gpickle saved!\n",
      "2019-02-12 23:35:33\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_EL.npz saved!\n",
      "2019-02-12 23:35:33\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:35:34\tICPC-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:34\t/bigdata/lespin/bioportal/transitions/graph/ICPC_2015_HS.gpickle saved!\n",
      "2019-02-12 23:35:34\t/bigdata/lespin/bioportal/transitions/matrix/ICPC_2015_HS.npz saved!\n",
      "2019-02-12 23:35:34\t/bigdata/lespin/bioportal/transitions/nodes/ICPC_2015_HS.csv saved!\n",
      "2019-02-12 23:35:35\tICPC-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:35:35\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/ICPC_2015_HS.gpickle saved!\n",
      "2019-02-12 23:35:35\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/ICPC_2015_HS.npz saved!\n",
      "2019-02-12 23:35:35\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/ICPC_2015_HS.csv saved!\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "NCIT\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/NCIT/42\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "PO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/PO/11\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "EFO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/EFO/144\n",
      "163.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "VANDF\n",
      "***********************************************\n",
      "2019-02-12 23:35:35\t/bigdata/lespin/datasets/bioportal/ontologies/VANDF/6/VANDF.csv.gz loaded!\n",
      "2019-02-12 23:35:42\tConvertion VANDF-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:35:45\t/bigdata/lespin/bioportal/ontologies/graph/VANDF_2015.gpickle saved!\n",
      "2019-02-12 23:35:45\t/bigdata/lespin/bioportal/ontologies/matrix/VANDF_2015.npz saved!\n",
      "2019-02-12 23:35:45\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_VANDF_2015.npz saved!\n",
      "2019-02-12 23:35:45\t/bigdata/lespin/bioportal/ontologies/nodes/VANDF_2015.csv saved!\n",
      "2019-02-12 23:35:45\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_VANDF_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:35:47\tVANDF-2015-None: 545 concepts found, but 537 kept (cros-val)\n",
      "2019-02-12 23:35:47\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:35:47\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_ALL.npz saved!\n",
      "2019-02-12 23:35:47\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_ALL.csv saved!\n",
      "2019-02-12 23:35:49\tVANDF-2015-None: 545 concepts found, but 10 kept (cros-val)\n",
      "2019-02-12 23:35:49\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:35:49\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_ALL.npz saved!\n",
      "2019-02-12 23:35:49\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:35:51\tVANDF-2015-DC: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:35:51\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_DC.gpickle saved!\n",
      "2019-02-12 23:35:51\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_DC.npz saved!\n",
      "2019-02-12 23:35:51\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_DC.csv saved!\n",
      "2019-02-12 23:35:53\tVANDF-2015-DC: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:35:53\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_DC.gpickle saved!\n",
      "2019-02-12 23:35:53\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_DC.npz saved!\n",
      "2019-02-12 23:35:53\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:35:55\tVANDF-2015-DE: 306 concepts found, but 300 kept (cros-val)\n",
      "2019-02-12 23:35:55\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_DE.gpickle saved!\n",
      "2019-02-12 23:35:55\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_DE.npz saved!\n",
      "2019-02-12 23:35:55\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_DE.csv saved!\n",
      "2019-02-12 23:35:57\tVANDF-2015-DE: 306 concepts found, but 3 kept (cros-val)\n",
      "2019-02-12 23:35:57\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_DE.gpickle saved!\n",
      "2019-02-12 23:35:57\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_DE.npz saved!\n",
      "2019-02-12 23:35:57\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:35:59\tVANDF-2015-EX: 4 concepts found, but 4 kept (cros-val)\n",
      "2019-02-12 23:35:59\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_EX.gpickle saved!\n",
      "2019-02-12 23:35:59\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_EX.npz saved!\n",
      "2019-02-12 23:35:59\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_EX.csv saved!\n",
      "2019-02-12 23:36:01\tVANDF-2015-EX: 4 concepts found, but 4 kept (cros-val)\n",
      "2019-02-12 23:36:01\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_EX.gpickle saved!\n",
      "2019-02-12 23:36:01\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_EX.npz saved!\n",
      "2019-02-12 23:36:01\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:36:03\tVANDF-2015-DU: 84 concepts found, but 82 kept (cros-val)\n",
      "2019-02-12 23:36:03\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_DU.gpickle saved!\n",
      "2019-02-12 23:36:03\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_DU.npz saved!\n",
      "2019-02-12 23:36:03\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_DU.csv saved!\n",
      "2019-02-12 23:36:05\tVANDF-2015-DU: 84 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:05\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_DU.gpickle saved!\n",
      "2019-02-12 23:36:05\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_DU.npz saved!\n",
      "2019-02-12 23:36:05\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:36:07\tVANDF-2015-LS: 141 concepts found, but 140 kept (cros-val)\n",
      "2019-02-12 23:36:07\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_LS.gpickle saved!\n",
      "2019-02-12 23:36:07\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_LS.npz saved!\n",
      "2019-02-12 23:36:07\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_LS.csv saved!\n",
      "2019-02-12 23:36:09\tVANDF-2015-LS: 141 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:36:09\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_LS.gpickle saved!\n",
      "2019-02-12 23:36:09\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_LS.npz saved!\n",
      "2019-02-12 23:36:09\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:36:11\tVANDF-2015-ES: 109 concepts found, but 109 kept (cros-val)\n",
      "2019-02-12 23:36:11\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_ES.gpickle saved!\n",
      "2019-02-12 23:36:11\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_ES.npz saved!\n",
      "2019-02-12 23:36:11\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_ES.csv saved!\n",
      "2019-02-12 23:36:13\tVANDF-2015-ES: 109 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:13\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_ES.gpickle saved!\n",
      "2019-02-12 23:36:13\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_ES.npz saved!\n",
      "2019-02-12 23:36:13\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:36:15\tVANDF-2015-EL: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:15\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_EL.gpickle saved!\n",
      "2019-02-12 23:36:15\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_EL.npz saved!\n",
      "2019-02-12 23:36:15\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_EL.csv saved!\n",
      "2019-02-12 23:36:17\tVANDF-2015-EL: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:17\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_EL.gpickle saved!\n",
      "2019-02-12 23:36:17\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_EL.npz saved!\n",
      "2019-02-12 23:36:17\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:36:19\tVANDF-2015-HS: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:36:19\t/bigdata/lespin/bioportal/transitions/graph/VANDF_2015_HS.gpickle saved!\n",
      "2019-02-12 23:36:19\t/bigdata/lespin/bioportal/transitions/matrix/VANDF_2015_HS.npz saved!\n",
      "2019-02-12 23:36:19\t/bigdata/lespin/bioportal/transitions/nodes/VANDF_2015_HS.csv saved!\n",
      "2019-02-12 23:36:21\tVANDF-2015-HS: 2 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:21\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/VANDF_2015_HS.gpickle saved!\n",
      "2019-02-12 23:36:21\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/VANDF_2015_HS.npz saved!\n",
      "2019-02-12 23:36:21\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/VANDF_2015_HS.csv saved!\n",
      "164.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "TAO\n",
      "***********************************************\n",
      "2019-02-12 23:36:21\t/bigdata/lespin/datasets/bioportal/ontologies/TAO/135/TAO.csv.gz loaded!\n",
      "2019-02-12 23:36:22\tConvertion TAO-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:36:22\t/bigdata/lespin/bioportal/ontologies/graph/TAO_2015.gpickle saved!\n",
      "2019-02-12 23:36:22\t/bigdata/lespin/bioportal/ontologies/matrix/TAO_2015.npz saved!\n",
      "2019-02-12 23:36:22\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_TAO_2015.npz saved!\n",
      "2019-02-12 23:36:22\t/bigdata/lespin/bioportal/ontologies/nodes/TAO_2015.csv saved!\n",
      "2019-02-12 23:36:22\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_TAO_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:36:23\tTAO-2015-None: 221 concepts found, but 183 kept (cros-val)\n",
      "2019-02-12 23:36:23\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:36:23\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_ALL.npz saved!\n",
      "2019-02-12 23:36:23\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_ALL.csv saved!\n",
      "2019-02-12 23:36:24\tTAO-2015-None: 221 concepts found, but 182 kept (cros-val)\n",
      "2019-02-12 23:36:24\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:36:24\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_ALL.npz saved!\n",
      "2019-02-12 23:36:24\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:36:24\tTAO-2015-DC: 46 concepts found, but 37 kept (cros-val)\n",
      "2019-02-12 23:36:24\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_DC.gpickle saved!\n",
      "2019-02-12 23:36:24\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_DC.npz saved!\n",
      "2019-02-12 23:36:24\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_DC.csv saved!\n",
      "2019-02-12 23:36:25\tTAO-2015-DC: 46 concepts found, but 37 kept (cros-val)\n",
      "2019-02-12 23:36:25\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_DC.gpickle saved!\n",
      "2019-02-12 23:36:25\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_DC.npz saved!\n",
      "2019-02-12 23:36:25\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:36:26\tTAO-2015-DE: 85 concepts found, but 66 kept (cros-val)\n",
      "2019-02-12 23:36:26\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_DE.gpickle saved!\n",
      "2019-02-12 23:36:26\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_DE.npz saved!\n",
      "2019-02-12 23:36:26\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_DE.csv saved!\n",
      "2019-02-12 23:36:26\tTAO-2015-DE: 85 concepts found, but 66 kept (cros-val)\n",
      "2019-02-12 23:36:26\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_DE.gpickle saved!\n",
      "2019-02-12 23:36:26\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_DE.npz saved!\n",
      "2019-02-12 23:36:26\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:36:27\tTAO-2015-EX: 105 concepts found, but 98 kept (cros-val)\n",
      "2019-02-12 23:36:27\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_EX.gpickle saved!\n",
      "2019-02-12 23:36:27\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_EX.npz saved!\n",
      "2019-02-12 23:36:27\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_EX.csv saved!\n",
      "2019-02-12 23:36:28\tTAO-2015-EX: 105 concepts found, but 97 kept (cros-val)\n",
      "2019-02-12 23:36:28\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_EX.gpickle saved!\n",
      "2019-02-12 23:36:28\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_EX.npz saved!\n",
      "2019-02-12 23:36:28\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:36:28\tTAO-2015-DU: 20 concepts found, but 5 kept (cros-val)\n",
      "2019-02-12 23:36:28\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_DU.gpickle saved!\n",
      "2019-02-12 23:36:28\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_DU.npz saved!\n",
      "2019-02-12 23:36:28\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_DU.csv saved!\n",
      "2019-02-12 23:36:29\tTAO-2015-DU: 20 concepts found, but 5 kept (cros-val)\n",
      "2019-02-12 23:36:29\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_DU.gpickle saved!\n",
      "2019-02-12 23:36:29\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_DU.npz saved!\n",
      "2019-02-12 23:36:29\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:36:30\tTAO-2015-LS: 54 concepts found, but 50 kept (cros-val)\n",
      "2019-02-12 23:36:30\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_LS.gpickle saved!\n",
      "2019-02-12 23:36:30\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_LS.npz saved!\n",
      "2019-02-12 23:36:30\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_LS.csv saved!\n",
      "2019-02-12 23:36:30\tTAO-2015-LS: 54 concepts found, but 50 kept (cros-val)\n",
      "2019-02-12 23:36:30\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_LS.gpickle saved!\n",
      "2019-02-12 23:36:30\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_LS.npz saved!\n",
      "2019-02-12 23:36:30\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:36:31\tTAO-2015-ES: 4 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:36:31\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_ES.gpickle saved!\n",
      "2019-02-12 23:36:31\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_ES.npz saved!\n",
      "2019-02-12 23:36:31\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_ES.csv saved!\n",
      "2019-02-12 23:36:32\tTAO-2015-ES: 4 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:36:32\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_ES.gpickle saved!\n",
      "2019-02-12 23:36:32\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_ES.npz saved!\n",
      "2019-02-12 23:36:32\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:36:32\tTAO-2015-EL: 8 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:32\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_EL.gpickle saved!\n",
      "2019-02-12 23:36:32\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_EL.npz saved!\n",
      "2019-02-12 23:36:32\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_EL.csv saved!\n",
      "2019-02-12 23:36:33\tTAO-2015-EL: 8 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:33\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_EL.gpickle saved!\n",
      "2019-02-12 23:36:33\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_EL.npz saved!\n",
      "2019-02-12 23:36:33\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:36:33\tTAO-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:33\t/bigdata/lespin/bioportal/transitions/graph/TAO_2015_HS.gpickle saved!\n",
      "2019-02-12 23:36:33\t/bigdata/lespin/bioportal/transitions/matrix/TAO_2015_HS.npz saved!\n",
      "2019-02-12 23:36:33\t/bigdata/lespin/bioportal/transitions/nodes/TAO_2015_HS.csv saved!\n",
      "2019-02-12 23:36:34\tTAO-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:36:34\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/TAO_2015_HS.gpickle saved!\n",
      "2019-02-12 23:36:34\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/TAO_2015_HS.npz saved!\n",
      "2019-02-12 23:36:34\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/TAO_2015_HS.csv saved!\n",
      "164.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ECO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/ECO/36\n",
      "164.0 all transitions (so far)\n",
      "\n",
      "107.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "CRISP\n",
      "***********************************************\n",
      "2019-02-12 23:36:34\t/bigdata/lespin/datasets/bioportal/ontologies/CRISP/6/CRISP.csv.gz loaded!\n",
      "2019-02-12 23:36:37\tConvertion CRISP-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:36:38\t/bigdata/lespin/bioportal/ontologies/graph/CRISP_2015.gpickle saved!\n",
      "2019-02-12 23:36:38\t/bigdata/lespin/bioportal/ontologies/matrix/CRISP_2015.npz saved!\n",
      "2019-02-12 23:36:38\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_CRISP_2015.npz saved!\n",
      "2019-02-12 23:36:38\t/bigdata/lespin/bioportal/ontologies/nodes/CRISP_2015.csv saved!\n",
      "2019-02-12 23:36:38\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_CRISP_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:36:39\tCRISP-2015-None: 532 concepts found, but 531 kept (cros-val)\n",
      "2019-02-12 23:36:39\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:36:39\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_ALL.npz saved!\n",
      "2019-02-12 23:36:39\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_ALL.csv saved!\n",
      "2019-02-12 23:36:40\tCRISP-2015-None: 532 concepts found, but 529 kept (cros-val)\n",
      "2019-02-12 23:36:40\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:36:40\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_ALL.npz saved!\n",
      "2019-02-12 23:36:40\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:36:41\tCRISP-2015-DC: 127 concepts found, but 127 kept (cros-val)\n",
      "2019-02-12 23:36:41\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_DC.gpickle saved!\n",
      "2019-02-12 23:36:41\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_DC.npz saved!\n",
      "2019-02-12 23:36:41\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_DC.csv saved!\n",
      "2019-02-12 23:36:42\tCRISP-2015-DC: 127 concepts found, but 127 kept (cros-val)\n",
      "2019-02-12 23:36:42\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_DC.gpickle saved!\n",
      "2019-02-12 23:36:42\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_DC.npz saved!\n",
      "2019-02-12 23:36:42\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:36:43\tCRISP-2015-DE: 158 concepts found, but 157 kept (cros-val)\n",
      "2019-02-12 23:36:43\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_DE.gpickle saved!\n",
      "2019-02-12 23:36:43\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_DE.npz saved!\n",
      "2019-02-12 23:36:43\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_DE.csv saved!\n",
      "2019-02-12 23:36:44\tCRISP-2015-DE: 158 concepts found, but 156 kept (cros-val)\n",
      "2019-02-12 23:36:44\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_DE.gpickle saved!\n",
      "2019-02-12 23:36:44\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_DE.npz saved!\n",
      "2019-02-12 23:36:44\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:36:45\tCRISP-2015-EX: 366 concepts found, but 365 kept (cros-val)\n",
      "2019-02-12 23:36:45\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_EX.gpickle saved!\n",
      "2019-02-12 23:36:45\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_EX.npz saved!\n",
      "2019-02-12 23:36:45\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_EX.csv saved!\n",
      "2019-02-12 23:36:46\tCRISP-2015-EX: 366 concepts found, but 365 kept (cros-val)\n",
      "2019-02-12 23:36:46\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_EX.gpickle saved!\n",
      "2019-02-12 23:36:46\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_EX.npz saved!\n",
      "2019-02-12 23:36:46\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:36:48\tCRISP-2015-DU: 28 concepts found, but 27 kept (cros-val)\n",
      "2019-02-12 23:36:48\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_DU.gpickle saved!\n",
      "2019-02-12 23:36:48\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_DU.npz saved!\n",
      "2019-02-12 23:36:48\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_DU.csv saved!\n",
      "2019-02-12 23:36:49\tCRISP-2015-DU: 28 concepts found, but 27 kept (cros-val)\n",
      "2019-02-12 23:36:49\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_DU.gpickle saved!\n",
      "2019-02-12 23:36:49\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_DU.npz saved!\n",
      "2019-02-12 23:36:49\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:36:50\tCRISP-2015-LS: 56 concepts found, but 55 kept (cros-val)\n",
      "2019-02-12 23:36:50\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_LS.gpickle saved!\n",
      "2019-02-12 23:36:50\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_LS.npz saved!\n",
      "2019-02-12 23:36:50\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_LS.csv saved!\n",
      "2019-02-12 23:36:51\tCRISP-2015-LS: 56 concepts found, but 54 kept (cros-val)\n",
      "2019-02-12 23:36:51\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_LS.gpickle saved!\n",
      "2019-02-12 23:36:51\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_LS.npz saved!\n",
      "2019-02-12 23:36:51\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:36:52\tCRISP-2015-ES: 29 concepts found, but 29 kept (cros-val)\n",
      "2019-02-12 23:36:52\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_ES.gpickle saved!\n",
      "2019-02-12 23:36:52\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_ES.npz saved!\n",
      "2019-02-12 23:36:52\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_ES.csv saved!\n",
      "2019-02-12 23:36:53\tCRISP-2015-ES: 29 concepts found, but 29 kept (cros-val)\n",
      "2019-02-12 23:36:53\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_ES.gpickle saved!\n",
      "2019-02-12 23:36:53\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_ES.npz saved!\n",
      "2019-02-12 23:36:53\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:36:54\tCRISP-2015-EL: 7 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 23:36:54\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_EL.gpickle saved!\n",
      "2019-02-12 23:36:54\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_EL.npz saved!\n",
      "2019-02-12 23:36:54\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_EL.csv saved!\n",
      "2019-02-12 23:36:55\tCRISP-2015-EL: 7 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 23:36:55\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_EL.gpickle saved!\n",
      "2019-02-12 23:36:55\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_EL.npz saved!\n",
      "2019-02-12 23:36:55\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:36:56\tCRISP-2015-HS: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:36:56\t/bigdata/lespin/bioportal/transitions/graph/CRISP_2015_HS.gpickle saved!\n",
      "2019-02-12 23:36:56\t/bigdata/lespin/bioportal/transitions/matrix/CRISP_2015_HS.npz saved!\n",
      "2019-02-12 23:36:56\t/bigdata/lespin/bioportal/transitions/nodes/CRISP_2015_HS.csv saved!\n",
      "2019-02-12 23:36:57\tCRISP-2015-HS: 2 concepts found, but 2 kept (cros-val)\n",
      "2019-02-12 23:36:57\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CRISP_2015_HS.gpickle saved!\n",
      "2019-02-12 23:36:57\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CRISP_2015_HS.npz saved!\n",
      "2019-02-12 23:36:57\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CRISP_2015_HS.csv saved!\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "CHEBI\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/CHEBI/97\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ENVO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/ENVO/35\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ORDO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/ORDO/7\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "PW\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/PW/52\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "BTO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/BTO/29\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "SYMP\n",
      "***********************************************\n",
      "'2015'\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "OBI\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/OBI/29\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "NBO\n",
      "***********************************************\n",
      "'2015'\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "SIO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/SIO/58\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "RADLEX\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/RADLEX/36\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "PSIMOD\n",
      "***********************************************\n",
      "'2015'\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "BIRNLEX\n",
      "***********************************************\n",
      "'2015'\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "VARIO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/VARIO/10\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "PR\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/PR/62\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "CLO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/CLO/46\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "ZFA\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/ZFA/42\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "PATO\n",
      "***********************************************\n",
      "'2015'\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "SBO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/SBO/505\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "UO\n",
      "***********************************************\n",
      "'2015'\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "VTO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/VTO/9\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "STATO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/STATO/10\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "CHMO\n",
      "***********************************************\n",
      "2019-02-12 23:36:57\t/bigdata/lespin/datasets/bioportal/ontologies/CHMO/18/CHMO.csv.gz loaded!\n",
      "2019-02-12 23:36:58\tConvertion CHMO-2015 DataFrame to DiGraph done!\n",
      "2019-02-12 23:36:58\t/bigdata/lespin/bioportal/ontologies/graph/CHMO_2015.gpickle saved!\n",
      "2019-02-12 23:36:58\t/bigdata/lespin/bioportal/ontologies/matrix/CHMO_2015.npz saved!\n",
      "2019-02-12 23:36:58\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_CHMO_2015.npz saved!\n",
      "2019-02-12 23:36:58\t/bigdata/lespin/bioportal/ontologies/nodes/CHMO_2015.csv saved!\n",
      "2019-02-12 23:36:59\t/bigdata/lespin/bioportal/ontologies/nodes/LCC_CHMO_2015.csv saved!\n",
      "==================\n",
      "None\n",
      "==================\n",
      "2019-02-12 23:36:59\tCHMO-2015-None: 764 concepts found, but 753 kept (cros-val)\n",
      "2019-02-12 23:36:59\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:36:59\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_ALL.npz saved!\n",
      "2019-02-12 23:36:59\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_ALL.csv saved!\n",
      "2019-02-12 23:37:00\tCHMO-2015-None: 764 concepts found, but 753 kept (cros-val)\n",
      "2019-02-12 23:37:00\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_ALL.gpickle saved!\n",
      "2019-02-12 23:37:00\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_ALL.npz saved!\n",
      "2019-02-12 23:37:00\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_ALL.csv saved!\n",
      "==================\n",
      "DC\n",
      "==================\n",
      "2019-02-12 23:37:01\tCHMO-2015-DC: 66 concepts found, but 65 kept (cros-val)\n",
      "2019-02-12 23:37:01\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_DC.gpickle saved!\n",
      "2019-02-12 23:37:01\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_DC.npz saved!\n",
      "2019-02-12 23:37:01\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_DC.csv saved!\n",
      "2019-02-12 23:37:02\tCHMO-2015-DC: 66 concepts found, but 65 kept (cros-val)\n",
      "2019-02-12 23:37:02\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_DC.gpickle saved!\n",
      "2019-02-12 23:37:02\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_DC.npz saved!\n",
      "2019-02-12 23:37:02\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_DC.csv saved!\n",
      "==================\n",
      "DE\n",
      "==================\n",
      "2019-02-12 23:37:03\tCHMO-2015-DE: 85 concepts found, but 82 kept (cros-val)\n",
      "2019-02-12 23:37:03\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_DE.gpickle saved!\n",
      "2019-02-12 23:37:03\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_DE.npz saved!\n",
      "2019-02-12 23:37:03\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_DE.csv saved!\n",
      "2019-02-12 23:37:04\tCHMO-2015-DE: 85 concepts found, but 82 kept (cros-val)\n",
      "2019-02-12 23:37:04\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_DE.gpickle saved!\n",
      "2019-02-12 23:37:04\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_DE.npz saved!\n",
      "2019-02-12 23:37:04\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_DE.csv saved!\n",
      "==================\n",
      "EX\n",
      "==================\n",
      "2019-02-12 23:37:05\tCHMO-2015-EX: 673 concepts found, but 671 kept (cros-val)\n",
      "2019-02-12 23:37:05\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_EX.gpickle saved!\n",
      "2019-02-12 23:37:05\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_EX.npz saved!\n",
      "2019-02-12 23:37:05\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_EX.csv saved!\n",
      "2019-02-12 23:37:05\tCHMO-2015-EX: 673 concepts found, but 671 kept (cros-val)\n",
      "2019-02-12 23:37:05\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_EX.gpickle saved!\n",
      "2019-02-12 23:37:05\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_EX.npz saved!\n",
      "2019-02-12 23:37:05\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_EX.csv saved!\n",
      "==================\n",
      "DU\n",
      "==================\n",
      "2019-02-12 23:37:06\tCHMO-2015-DU: 18 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 23:37:06\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_DU.gpickle saved!\n",
      "2019-02-12 23:37:06\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_DU.npz saved!\n",
      "2019-02-12 23:37:06\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_DU.csv saved!\n",
      "2019-02-12 23:37:07\tCHMO-2015-DU: 18 concepts found, but 7 kept (cros-val)\n",
      "2019-02-12 23:37:07\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_DU.gpickle saved!\n",
      "2019-02-12 23:37:07\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_DU.npz saved!\n",
      "2019-02-12 23:37:07\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_DU.csv saved!\n",
      "==================\n",
      "LS\n",
      "==================\n",
      "2019-02-12 23:37:07\tCHMO-2015-LS: 118 concepts found, but 115 kept (cros-val)\n",
      "2019-02-12 23:37:07\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_LS.gpickle saved!\n",
      "2019-02-12 23:37:07\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_LS.npz saved!\n",
      "2019-02-12 23:37:07\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_LS.csv saved!\n",
      "2019-02-12 23:37:08\tCHMO-2015-LS: 118 concepts found, but 115 kept (cros-val)\n",
      "2019-02-12 23:37:08\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_LS.gpickle saved!\n",
      "2019-02-12 23:37:08\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_LS.npz saved!\n",
      "2019-02-12 23:37:08\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_LS.csv saved!\n",
      "==================\n",
      "ES\n",
      "==================\n",
      "2019-02-12 23:37:09\tCHMO-2015-ES: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:37:09\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_ES.gpickle saved!\n",
      "2019-02-12 23:37:09\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_ES.npz saved!\n",
      "2019-02-12 23:37:09\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_ES.csv saved!\n",
      "2019-02-12 23:37:10\tCHMO-2015-ES: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:37:10\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_ES.gpickle saved!\n",
      "2019-02-12 23:37:10\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_ES.npz saved!\n",
      "2019-02-12 23:37:10\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_ES.csv saved!\n",
      "==================\n",
      "EL\n",
      "==================\n",
      "2019-02-12 23:37:10\tCHMO-2015-EL: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:37:10\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_EL.gpickle saved!\n",
      "2019-02-12 23:37:10\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_EL.npz saved!\n",
      "2019-02-12 23:37:10\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_EL.csv saved!\n",
      "2019-02-12 23:37:11\tCHMO-2015-EL: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:37:11\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_EL.gpickle saved!\n",
      "2019-02-12 23:37:11\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_EL.npz saved!\n",
      "2019-02-12 23:37:11\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_EL.csv saved!\n",
      "==================\n",
      "HS\n",
      "==================\n",
      "2019-02-12 23:37:12\tCHMO-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:37:12\t/bigdata/lespin/bioportal/transitions/graph/CHMO_2015_HS.gpickle saved!\n",
      "2019-02-12 23:37:12\t/bigdata/lespin/bioportal/transitions/matrix/CHMO_2015_HS.npz saved!\n",
      "2019-02-12 23:37:12\t/bigdata/lespin/bioportal/transitions/nodes/CHMO_2015_HS.csv saved!\n",
      "2019-02-12 23:37:12\tCHMO-2015-HS: 0 concepts found, but 0 kept (cros-val)\n",
      "2019-02-12 23:37:12\t/bigdata/lespin/bioportal/transitions_in_lcc/graph/CHMO_2015_HS.gpickle saved!\n",
      "2019-02-12 23:37:12\t/bigdata/lespin/bioportal/transitions_in_lcc/matrix/CHMO_2015_HS.npz saved!\n",
      "2019-02-12 23:37:12\t/bigdata/lespin/bioportal/transitions_in_lcc/nodes/CHMO_2015_HS.csv saved!\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "FMA\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/FMA/11\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "BAO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/BAO/26\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "SO\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/SO/206\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "FB-BT\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/FB-BT/32\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "DRON\n",
      "***********************************************\n",
      "Ontology file not found in /bigdata/lespin/datasets/bioportal/ontologies/DRON/5\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "PECO\n",
      "***********************************************\n",
      "'2015'\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "***********************************************\n",
      "MDRFRE\n",
      "***********************************************\n",
      "'MDRFRE'\n",
      "165.0 all transitions (so far)\n",
      "\n",
      "108.0 lcc transitions (so far)\n",
      "\n",
      "\n",
      "2019-02-12 23:37:12\t/bigdata/lespin/bioportal/logs/ontology_2019-02-12_23.log saved!\n"
     ]
    }
   ],
   "source": [
    "print(cap.stdout)\n",
    "log(LOG_OUTPUT, ON, cap)\n",
    "del(cap)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 16,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "defaultdict(<function __main__.<lambda>()>,\n",
       "            {'DC': 17677,\n",
       "             'DE': 57683,\n",
       "             'DU': 73608,\n",
       "             'EL': 959.0,\n",
       "             'ES': 14287.0,\n",
       "             'EX': 116876,\n",
       "             'HS': 165.0,\n",
       "             'LS': 64303,\n",
       "             None: 345558})"
      ]
     },
     "execution_count": 16,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "all_transitions"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 17,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "defaultdict(<function __main__.<lambda>()>,\n",
       "            {'DC': 17229.0,\n",
       "             'DE': 34343.0,\n",
       "             'DU': 38654.0,\n",
       "             'EL': 490.0,\n",
       "             'ES': 5323.0,\n",
       "             'EX': 108151.0,\n",
       "             'HS': 108.0,\n",
       "             'LS': 40880.0,\n",
       "             None: 245178.0})"
      ]
     },
     "execution_count": 17,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "lcc_transitions"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h2># Transitions per navigation type</h2>"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h3>Valid transitions: All visited concepts</h3>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 18,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "image/png": 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\n",
      "text/plain": [
       "<Figure size 432x288 with 1 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "fn = os.path.join(PLOTS_OUTPUT,'summary_navitypes_valid_transitions_{}.pdf'.format(YEAR))\n",
    "plot_transitions_per_navitype(valid_clickstreams, all_transitions, NAVITYPES, fn)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h3>Valid transitions: LCC visited concepts</h3>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 19,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "image/png": 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\n",
      "text/plain": [
       "<Figure size 432x288 with 1 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "fn = os.path.join(PLOTS_OUTPUT,'lcc_summary_navitypes_valid_transitions_{}.pdf'.format(YEAR))\n",
    "plot_transitions_per_navitype(valid_clickstreams, lcc_transitions, NAVITYPES, fn)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h2># Transitions per ontology</h2>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 62,
   "metadata": {},
   "outputs": [],
   "source": [
    "%%capture cap --no-stderr\n",
    "\n",
    "columns = ['ontology','navitype','ntransitions','lcc_ntransitions']\n",
    "fn = os.path.join(SUMMARY_OUTPUT,'summary_transitions_{}.{}'.format(YEAR,'csv'))\n",
    "if os.path.exists(fn):\n",
    "    df_trans = pd.read_csv(fn, index_col=None)[columns]\n",
    "    print('{} loaded!'.format(fn))\n",
    "else:    \n",
    "    df_trans = pd.DataFrame(columns=columns)\n",
    "\n",
    "    for onto_name in valid_ontologies_clickstream._ontology.unique():\n",
    "        for navitype in [None] + NAVITYPES:\n",
    "            try:\n",
    "                # all transitions\n",
    "                cs = Transition(onto_name, navitype, YEAR)            \n",
    "                cs.load_adjacency(path=LCC_TRANS_ADJACENCY_OUTPUT)\n",
    "                lccntrans = cs.T.sum()\n",
    "                cs.load_adjacency(path=TRANS_ADJACENCY_OUTPUT)\n",
    "                ntrans = cs.T.sum()\n",
    "\n",
    "                if cs.T is not None:\n",
    "                    df_trans = df_trans.append({'ontology':onto_name,\n",
    "                                                'navitype':'ALL' if navitype is None else navitype,\n",
    "                                                'ntransitions':ntrans,\n",
    "                                                'lcc_ntransitions':lccntrans\n",
    "                                                }, ignore_index=True)\n",
    "                del(cs)\n",
    "            except Exception as ex:\n",
    "                print(ex)\n",
    "    \n",
    "    print('{} saving...'.format(fn))\n",
    "    df_trans.to_csv(fn, index=False)\n",
    "    print('{} saved!'.format(fn))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 63,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "/bigdata/lespin/bioportal/summary/summary_transitions_2015.csv loaded!\n",
      "\n",
      "2019-02-21 19:52:25\t/bigdata/lespin/bioportal/logs/ontology_2019-02-21_19.log saved!\n"
     ]
    }
   ],
   "source": [
    "print(cap.stdout)\n",
    "log(LOG_OUTPUT, ON, cap)\n",
    "del(cap)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 64,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
       "        vertical-align: middle;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>ontology</th>\n",
       "      <th>navitype</th>\n",
       "      <th>ntransitions</th>\n",
       "      <th>lcc_ntransitions</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>SNOMEDCT</td>\n",
       "      <td>ALL</td>\n",
       "      <td>110859.0</td>\n",
       "      <td>110441.0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>SNOMEDCT</td>\n",
       "      <td>DC</td>\n",
       "      <td>5241.0</td>\n",
       "      <td>5216.0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>SNOMEDCT</td>\n",
       "      <td>DE</td>\n",
       "      <td>10282.0</td>\n",
       "      <td>10110.0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>SNOMEDCT</td>\n",
       "      <td>EX</td>\n",
       "      <td>55174.0</td>\n",
       "      <td>55069.0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>SNOMEDCT</td>\n",
       "      <td>DU</td>\n",
       "      <td>23343.0</td>\n",
       "      <td>23318.0</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "   ontology navitype  ntransitions  lcc_ntransitions\n",
       "0  SNOMEDCT      ALL      110859.0          110441.0\n",
       "1  SNOMEDCT       DC        5241.0            5216.0\n",
       "2  SNOMEDCT       DE       10282.0           10110.0\n",
       "3  SNOMEDCT       EX       55174.0           55069.0\n",
       "4  SNOMEDCT       DU       23343.0           23318.0"
      ]
     },
     "execution_count": 64,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "df_trans.head()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h3>Valid transitions: All visited concepts</h3>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 11,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "image/png": 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\n",
      "text/plain": [
       "<Figure size 561.6x360 with 1 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "tmp = df_trans.query(\"navitype != 'ALL'\")\n",
    "sorted_ontos = tmp.groupby('ontology').ntransitions.sum().reset_index()\n",
    "sorted_ontos.sort_values('ntransitions', ascending=False, inplace=True)\n",
    "sorted_valid_ontos = sorted_ontos.query(\"ntransitions>=@MIN_TRANSITIONS\")\n",
    "\n",
    "fn = os.path.join(PLOTS_OUTPUT,'summary_navitypes_valid_transitions_per_ontology_{}.pdf'.format(YEAR))\n",
    "plot_transitions_per_ontology_and_navitype(tmp, 'ntransitions', sorted_valid_ontos.ontology, fn=fn)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h3>Valid transitions: LCC visited concepts</h3>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 14,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "image/png": 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\n",
      "text/plain": [
       "<Figure size 561.6x360 with 1 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "tmp = df_trans.query(\"navitype != 'ALL'\")\n",
    "sorted_ontos = tmp.groupby('ontology').lcc_ntransitions.sum().reset_index()\n",
    "sorted_ontos.sort_values('lcc_ntransitions', ascending=False, inplace=True)\n",
    "sorted_valid_ontos = sorted_ontos.query(\"lcc_ntransitions>=@MIN_TRANSITIONS\")\n",
    "\n",
    "fn = os.path.join(PLOTS_OUTPUT,'lcc_summary_navitypes_valid_transitions_per_ontology_{}.pdf'.format(YEAR))\n",
    "plot_transitions_per_ontology_and_navitype(tmp, 'lcc_ntransitions', sorted_valid_ontos.ontology, 7.8, 5, fn=fn)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 99,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "image/png": 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\n",
      "text/plain": [
       "<Figure size 561.6x288 with 1 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "tmp = df_trans.query(\"navitype != 'ALL'\")\n",
    "sorted_ontos = tmp.groupby('ontology').lcc_ntransitions.sum().reset_index()\n",
    "sorted_ontos.sort_values('lcc_ntransitions', ascending=False, inplace=True)\n",
    "sorted_valid_ontos = sorted_ontos.query(\"lcc_ntransitions>=@MIN_TRANSITIONS\").query(\"~ontology.isin(['SNOMEDCT'])\")\n",
    "sorted_valid_ontos\n",
    "fn = os.path.join(PLOTS_OUTPUT,'_lcc_summary_navitypes_valid_transitions_per_ontology_{}.pdf'.format(YEAR))\n",
    "plot_transitions_per_ontology_and_navitype(tmp, 'lcc_ntransitions', sorted_valid_ontos.ontology, 7.8, 4, fn)\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 77,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "(242883.0, 303557.0, 0.8001232058559019)"
      ]
     },
     "execution_count": 77,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "tmp = df_trans.query(\"navitype=='ALL' & lcc_ntransitions >= 1000 \")\n",
    "tmp.lcc_ntransitions.sum(), tmp.ntransitions.sum(),  tmp.lcc_ntransitions.sum() / tmp.ntransitions.sum()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 78,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "0.6873034489200718"
      ]
     },
     "execution_count": 78,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "tmp = df_trans.query(\"navitype=='ALL' & lcc_ntransitions >= 1000 & ontology != 'SNOMEDCT' \")\n",
    "tmp.lcc_ntransitions.sum() / tmp.ntransitions.sum()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 89,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "navitype\n",
       "HS    0.00\n",
       "EL    0.00\n",
       "ES    0.03\n",
       "DC    0.09\n",
       "DU    0.11\n",
       "DE    0.18\n",
       "LS    0.19\n",
       "EX    0.39\n",
       "Name: lcc_ntransitions, dtype: float64"
      ]
     },
     "execution_count": 89,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "ontos = df_trans.query(\"navitype=='ALL' & lcc_ntransitions >= 1000  & ontology != 'SNOMEDCT'\").ontology.unique()\n",
    "tmp = df_trans.query(\"navitype!='ALL' & ontology.isin(@ontos)\")\n",
    "(tmp.groupby('navitype').sum().lcc_ntransitions / tmp.groupby('navitype').sum().lcc_ntransitions.sum()).sort_values().round(2)\n"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "<h2>Summary Table</h2>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 29,
   "metadata": {
    "scrolled": true
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "SNOMEDCT\n",
      "2019-02-12 23:40:13\t/bigdata/lespin/bioportal/ontologies/matrix/SNOMEDCT_2015.npz loaded!\n",
      "2019-02-12 23:40:13\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_SNOMEDCT_2015.npz loaded!\n",
      "2019-02-12 23:40:16\t/bigdata/lespin/bioportal/ontologies/graph/SNOMEDCT_2015.gpickle loaded!\n",
      "CPT\n",
      "2019-02-12 23:40:31\t/bigdata/lespin/bioportal/ontologies/matrix/CPT_2015.npz loaded!\n",
      "2019-02-12 23:40:31\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_CPT_2015.npz loaded!\n",
      "2019-02-12 23:40:31\t/bigdata/lespin/bioportal/ontologies/graph/CPT_2015.gpickle loaded!\n",
      "ICD10\n",
      "2019-02-12 23:40:32\t/bigdata/lespin/bioportal/ontologies/matrix/ICD10_2015.npz loaded!\n",
      "2019-02-12 23:40:32\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_ICD10_2015.npz loaded!\n",
      "2019-02-12 23:40:32\t/bigdata/lespin/bioportal/ontologies/graph/ICD10_2015.gpickle loaded!\n",
      "RXNORM\n",
      "2019-02-12 23:40:32\t/bigdata/lespin/bioportal/ontologies/matrix/RXNORM_2015.npz loaded!\n",
      "2019-02-12 23:40:32\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_RXNORM_2015.npz loaded!\n",
      "2019-02-12 23:40:33\t/bigdata/lespin/bioportal/ontologies/graph/RXNORM_2015.gpickle loaded!\n",
      "RCD\n",
      "2019-02-12 23:40:36\t/bigdata/lespin/bioportal/ontologies/matrix/RCD_2015.npz loaded!\n",
      "2019-02-12 23:40:36\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_RCD_2015.npz loaded!\n",
      "2019-02-12 23:40:36\t/bigdata/lespin/bioportal/ontologies/graph/RCD_2015.gpickle loaded!\n",
      "NDDF\n",
      "2019-02-12 23:40:36\t/bigdata/lespin/bioportal/ontologies/matrix/NDDF_2015.npz loaded!\n",
      "2019-02-12 23:40:36\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_NDDF_2015.npz loaded!\n",
      "2019-02-12 23:40:36\t/bigdata/lespin/bioportal/ontologies/graph/NDDF_2015.gpickle loaded!\n",
      "MEDDRA\n",
      "2019-02-12 23:40:37\t/bigdata/lespin/bioportal/ontologies/matrix/MEDDRA_2015.npz loaded!\n",
      "2019-02-12 23:40:37\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_MEDDRA_2015.npz loaded!\n",
      "2019-02-12 23:40:37\t/bigdata/lespin/bioportal/ontologies/graph/MEDDRA_2015.gpickle loaded!\n",
      "HL7\n",
      "2019-02-12 23:40:39\t/bigdata/lespin/bioportal/ontologies/matrix/HL7_2015.npz loaded!\n",
      "2019-02-12 23:40:39\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_HL7_2015.npz loaded!\n",
      "2019-02-12 23:40:39\t/bigdata/lespin/bioportal/ontologies/graph/HL7_2015.gpickle loaded!\n",
      "WHO-ART\n",
      "2019-02-12 23:40:40\t/bigdata/lespin/bioportal/ontologies/matrix/WHO-ART_2015.npz loaded!\n",
      "2019-02-12 23:40:40\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_WHO-ART_2015.npz loaded!\n",
      "2019-02-12 23:40:40\t/bigdata/lespin/bioportal/ontologies/graph/WHO-ART_2015.gpickle loaded!\n",
      "ICD9CM\n",
      "2019-02-12 23:40:40\t/bigdata/lespin/bioportal/ontologies/matrix/ICD9CM_2015.npz loaded!\n",
      "2019-02-12 23:40:40\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_ICD9CM_2015.npz loaded!\n",
      "2019-02-12 23:40:40\t/bigdata/lespin/bioportal/ontologies/graph/ICD9CM_2015.gpickle loaded!\n",
      "LOINC\n",
      "2019-02-12 23:40:41\t/bigdata/lespin/bioportal/ontologies/matrix/LOINC_2015.npz loaded!\n",
      "2019-02-12 23:40:41\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_LOINC_2015.npz loaded!\n",
      "2019-02-12 23:40:42\t/bigdata/lespin/bioportal/ontologies/graph/LOINC_2015.gpickle loaded!\n",
      "MESH\n",
      "2019-02-12 23:40:49\t/bigdata/lespin/bioportal/ontologies/matrix/MESH_2015.npz loaded!\n",
      "2019-02-12 23:40:49\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_MESH_2015.npz loaded!\n",
      "2019-02-12 23:40:49\t/bigdata/lespin/bioportal/ontologies/graph/MESH_2015.gpickle loaded!\n",
      "NDFRT\n",
      "2019-02-12 23:40:53\t/bigdata/lespin/bioportal/ontologies/matrix/NDFRT_2015.npz loaded!\n",
      "2019-02-12 23:40:53\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_NDFRT_2015.npz loaded!\n",
      "2019-02-12 23:40:54\t/bigdata/lespin/bioportal/ontologies/graph/NDFRT_2015.gpickle loaded!\n",
      "OMIM\n",
      "2019-02-12 23:40:55\t/bigdata/lespin/bioportal/ontologies/matrix/OMIM_2015.npz loaded!\n",
      "2019-02-12 23:40:55\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_OMIM_2015.npz loaded!\n",
      "2019-02-12 23:40:55\t/bigdata/lespin/bioportal/ontologies/graph/OMIM_2015.gpickle loaded!\n",
      "SNMI\n",
      "2019-02-12 23:40:58\t/bigdata/lespin/bioportal/ontologies/matrix/SNMI_2015.npz loaded!\n",
      "2019-02-12 23:40:58\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_SNMI_2015.npz loaded!\n",
      "2019-02-12 23:40:58\t/bigdata/lespin/bioportal/ontologies/graph/SNMI_2015.gpickle loaded!\n",
      "MAMO\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/matrix/MAMO_2015.npz loaded!\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_MAMO_2015.npz loaded!\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/graph/MAMO_2015.gpickle loaded!\n",
      "ICPC\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/matrix/ICPC_2015.npz loaded!\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_ICPC_2015.npz loaded!\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/graph/ICPC_2015.gpickle loaded!\n",
      "VANDF\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/matrix/VANDF_2015.npz loaded!\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_VANDF_2015.npz loaded!\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/graph/VANDF_2015.gpickle loaded!\n",
      "TAO\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/matrix/TAO_2015.npz loaded!\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_TAO_2015.npz loaded!\n",
      "2019-02-12 23:41:00\t/bigdata/lespin/bioportal/ontologies/graph/TAO_2015.gpickle loaded!\n",
      "CRISP\n",
      "2019-02-12 23:41:01\t/bigdata/lespin/bioportal/ontologies/matrix/CRISP_2015.npz loaded!\n",
      "2019-02-12 23:41:01\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_CRISP_2015.npz loaded!\n",
      "2019-02-12 23:41:01\t/bigdata/lespin/bioportal/ontologies/graph/CRISP_2015.gpickle loaded!\n",
      "CHMO\n",
      "2019-02-12 23:41:01\t/bigdata/lespin/bioportal/ontologies/matrix/CHMO_2015.npz loaded!\n",
      "2019-02-12 23:41:01\t/bigdata/lespin/bioportal/ontologies/matrix/LCC_CHMO_2015.npz loaded!\n",
      "2019-02-12 23:41:01\t/bigdata/lespin/bioportal/ontologies/graph/CHMO_2015.gpickle loaded!\n"
     ]
    }
   ],
   "source": [
    "##########################################################################################\n",
    "### N: number of nodes\n",
    "### E: number of edges\n",
    "### k: average degree\n",
    "### nc: number of connected components\n",
    "### T: number of transitions\n",
    "##########################################################################################\n",
    "\n",
    "columns = ['ontology','N','E','k','cc','T', \"N'\",\"E'\",\"k'\",\"T'\"]\n",
    "df_onto = pd.DataFrame(columns=columns)\n",
    "for onto_name in df_trans.ontology.unique():\n",
    "    print(onto_name)\n",
    "    try:\n",
    "        # ontology\n",
    "        submission = submissions_dict[onto_name][YEAR]\n",
    "        onto = Ontology(name=onto_name, year=YEAR, submission_id=submission['submissionId'], root_folder=ONTOLOGY_ROOT)\n",
    "        onto.load_adjacency(path=ONTOLOGY_ADJACENCY_OUTPUT)\n",
    "        onto.load_adjacency(path=ONTOLOGY_ADJACENCY_OUTPUT, lcc=True)\n",
    "        onto.load_graph(path=ONTOLOGY_GRAPH_OUTPUT)\n",
    "        ncomponents = nx.number_connected_components(onto.G.to_undirected())\n",
    "        del(onto.G)\n",
    "        \n",
    "        # transitions\n",
    "        try: \n",
    "            tmp = df_trans.query(\"ontology==@onto_name & navitype=='ALL'\")\n",
    "            ntrans = tmp.ntransitions\n",
    "            lcc_ntrans = tmp.lcc_ntransitions\n",
    "        except Exception as ex: \n",
    "            ntrans = 0\n",
    "            lcc_ntrans = 0\n",
    "            print(ex)\n",
    "        \n",
    "        # summary\n",
    "        df_onto = df_onto.append({ 'ontology':onto_name,\n",
    "                                   'N':onto.A.shape[0],\n",
    "                                   'E':onto.A.sum(),\n",
    "                                   'k':2*onto.A.sum()/onto.A.shape[0],\n",
    "                                   'cc':ncomponents,\n",
    "                                   'T':ntrans,\n",
    "                                   \"N'\":onto.lcc_A.shape[0],\n",
    "                                   \"E'\":onto.lcc_A.sum(),\n",
    "                                   \"k'\":2*onto.lcc_A.sum()/onto.lcc_A.shape[0],\n",
    "                                   \"T'\":lcc_ntrans,\n",
    "                              }, ignore_index=True)\n",
    "        \n",
    "        del(onto)\n",
    "        \n",
    "    except Exception as ex:\n",
    "        print(ex)\n",
    "        "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 30,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
       "        vertical-align: middle;\n",
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       "\n",
       "    .dataframe tbody tr th {\n",
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       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>ontology</th>\n",
       "      <th>N</th>\n",
       "      <th>E</th>\n",
       "      <th>k</th>\n",
       "      <th>cc</th>\n",
       "      <th>T</th>\n",
       "      <th>N'</th>\n",
       "      <th>E'</th>\n",
       "      <th>k'</th>\n",
       "      <th>T'</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>SNOMEDCT</td>\n",
       "      <td>315684</td>\n",
       "      <td>467027</td>\n",
       "      <td>2.958826</td>\n",
       "      <td>60</td>\n",
       "      <td>0    110859\n",
       "Name: ntransitions, dtype: object</td>\n",
       "      <td>315205</td>\n",
       "      <td>466607</td>\n",
       "      <td>2.960657</td>\n",
       "      <td>0    110441\n",
       "Name: lcc_ntransitions, dtype: object</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>CPT</td>\n",
       "      <td>13219</td>\n",
       "      <td>13235</td>\n",
       "      <td>2.002421</td>\n",
       "      <td>3</td>\n",
       "      <td>9    44815\n",
       "Name: ntransitions, dtype: object</td>\n",
       "      <td>13092</td>\n",
       "      <td>13110</td>\n",
       "      <td>2.002750</td>\n",
       "      <td>9    44651\n",
       "Name: lcc_ntransitions, dtype: object</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>ICD10</td>\n",
       "      <td>12446</td>\n",
       "      <td>11256</td>\n",
       "      <td>1.808774</td>\n",
       "      <td>1190</td>\n",
       "      <td>18    2328\n",
       "Name: ntransitions, dtype: object</td>\n",
       "      <td>11132</td>\n",
       "      <td>11131</td>\n",
       "      <td>1.999820</td>\n",
       "      <td>18    2288\n",
       "Name: lcc_ntransitions, dtype: object</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>RXNORM</td>\n",
       "      <td>118555</td>\n",
       "      <td>125</td>\n",
       "      <td>0.002109</td>\n",
       "      <td>118430</td>\n",
       "      <td>27    29416\n",
       "Name: ntransitions, dtype: object</td>\n",
       "      <td>92</td>\n",
       "      <td>91</td>\n",
       "      <td>1.978261</td>\n",
       "      <td>27    10\n",
       "Name: lcc_ntransitions, dtype: object</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>RCD</td>\n",
       "      <td>11325</td>\n",
       "      <td>6893</td>\n",
       "      <td>1.217307</td>\n",
       "      <td>4446</td>\n",
       "      <td>36    667\n",
       "Name: ntransitions, dtype: object</td>\n",
       "      <td>49</td>\n",
       "      <td>53</td>\n",
       "      <td>2.163265</td>\n",
       "      <td>36    0\n",
       "Name: lcc_ntransitions, dtype: object</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "   ontology       N       E         k      cc  \\\n",
       "0  SNOMEDCT  315684  467027  2.958826      60   \n",
       "1       CPT   13219   13235  2.002421       3   \n",
       "2     ICD10   12446   11256  1.808774    1190   \n",
       "3    RXNORM  118555     125  0.002109  118430   \n",
       "4       RCD   11325    6893  1.217307    4446   \n",
       "\n",
       "                                               T      N'      E'        k'  \\\n",
       "0  0    110859\n",
       "Name: ntransitions, dtype: object  315205  466607  2.960657   \n",
       "1   9    44815\n",
       "Name: ntransitions, dtype: object   13092   13110  2.002750   \n",
       "2   18    2328\n",
       "Name: ntransitions, dtype: object   11132   11131  1.999820   \n",
       "3  27    29416\n",
       "Name: ntransitions, dtype: object      92      91  1.978261   \n",
       "4    36    667\n",
       "Name: ntransitions, dtype: object      49      53  2.163265   \n",
       "\n",
       "                                                  T'  \n",
       "0  0    110441\n",
       "Name: lcc_ntransitions, dtype: object  \n",
       "1   9    44651\n",
       "Name: lcc_ntransitions, dtype: object  \n",
       "2   18    2288\n",
       "Name: lcc_ntransitions, dtype: object  \n",
       "3     27    10\n",
       "Name: lcc_ntransitions, dtype: object  \n",
       "4      36    0\n",
       "Name: lcc_ntransitions, dtype: object  "
      ]
     },
     "execution_count": 30,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "df_onto.head()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 33,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
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       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>#</th>\n",
       "      <th>ontology</th>\n",
       "      <th>N</th>\n",
       "      <th>E</th>\n",
       "      <th>k</th>\n",
       "      <th>cc</th>\n",
       "      <th>T</th>\n",
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       "      <th>k'</th>\n",
       "      <th>T'</th>\n",
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       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>0</td>\n",
       "      <td>SNOMEDCT</td>\n",
       "      <td>315684</td>\n",
       "      <td>467027</td>\n",
       "      <td>2.958826</td>\n",
       "      <td>60</td>\n",
       "      <td>110859</td>\n",
       "      <td>315205</td>\n",
       "      <td>466607</td>\n",
       "      <td>2.960657</td>\n",
       "      <td>110441</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>1</td>\n",
       "      <td>CPT</td>\n",
       "      <td>13219</td>\n",
       "      <td>13235</td>\n",
       "      <td>2.002421</td>\n",
       "      <td>3</td>\n",
       "      <td>44815</td>\n",
       "      <td>13092</td>\n",
       "      <td>13110</td>\n",
       "      <td>2.002750</td>\n",
       "      <td>44651</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>2</td>\n",
       "      <td>ICD10</td>\n",
       "      <td>12446</td>\n",
       "      <td>11256</td>\n",
       "      <td>1.808774</td>\n",
       "      <td>1190</td>\n",
       "      <td>2328</td>\n",
       "      <td>11132</td>\n",
       "      <td>11131</td>\n",
       "      <td>1.999820</td>\n",
       "      <td>2288</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>3</td>\n",
       "      <td>RXNORM</td>\n",
       "      <td>118555</td>\n",
       "      <td>125</td>\n",
       "      <td>0.002109</td>\n",
       "      <td>118430</td>\n",
       "      <td>29416</td>\n",
       "      <td>92</td>\n",
       "      <td>91</td>\n",
       "      <td>1.978261</td>\n",
       "      <td>10</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>4</td>\n",
       "      <td>RCD</td>\n",
       "      <td>11325</td>\n",
       "      <td>6893</td>\n",
       "      <td>1.217307</td>\n",
       "      <td>4446</td>\n",
       "      <td>667</td>\n",
       "      <td>49</td>\n",
       "      <td>53</td>\n",
       "      <td>2.163265</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "   #  ontology       N       E         k      cc       T      N'      E'  \\\n",
       "0  0  SNOMEDCT  315684  467027  2.958826      60  110859  315205  466607   \n",
       "1  1       CPT   13219   13235  2.002421       3   44815   13092   13110   \n",
       "2  2     ICD10   12446   11256  1.808774    1190    2328   11132   11131   \n",
       "3  3    RXNORM  118555     125  0.002109  118430   29416      92      91   \n",
       "4  4       RCD   11325    6893  1.217307    4446     667      49      53   \n",
       "\n",
       "         k'      T'  \n",
       "0  2.960657  110441  \n",
       "1  2.002750   44651  \n",
       "2  1.999820    2288  \n",
       "3  1.978261      10  \n",
       "4  2.163265       0  "
      ]
     },
     "execution_count": 33,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "df_onto.reset_index(drop=False,inplace=True)\n",
    "df_onto.rename(columns={'index':'#'}, inplace=True)\n",
    "df_onto.loc[:,'T'] = df_onto['T'].astype(np.int)\n",
    "df_onto.loc[:,\"T'\"] = df_onto[\"T'\"].astype(np.int)\n",
    "df_onto=df_onto[['#']+columns]\n",
    "df_onto.head()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 35,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
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       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>#</th>\n",
       "      <th>ontology</th>\n",
       "      <th>N</th>\n",
       "      <th>E</th>\n",
       "      <th>k</th>\n",
       "      <th>cc</th>\n",
       "      <th>T</th>\n",
       "      <th>N'</th>\n",
       "      <th>E'</th>\n",
       "      <th>k'</th>\n",
       "      <th>T'</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>1</td>\n",
       "      <td>SNOMEDCT</td>\n",
       "      <td>315684</td>\n",
       "      <td>467027</td>\n",
       "      <td>2.958826</td>\n",
       "      <td>60</td>\n",
       "      <td>110859</td>\n",
       "      <td>315205</td>\n",
       "      <td>466607</td>\n",
       "      <td>2.960657</td>\n",
       "      <td>110441</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>2</td>\n",
       "      <td>CPT</td>\n",
       "      <td>13219</td>\n",
       "      <td>13235</td>\n",
       "      <td>2.002421</td>\n",
       "      <td>3</td>\n",
       "      <td>44815</td>\n",
       "      <td>13092</td>\n",
       "      <td>13110</td>\n",
       "      <td>2.002750</td>\n",
       "      <td>44651</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>3</td>\n",
       "      <td>MEDDRA</td>\n",
       "      <td>66506</td>\n",
       "      <td>31863</td>\n",
       "      <td>0.958199</td>\n",
       "      <td>43493</td>\n",
       "      <td>71580</td>\n",
       "      <td>22889</td>\n",
       "      <td>31738</td>\n",
       "      <td>2.773210</td>\n",
       "      <td>42746</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>4</td>\n",
       "      <td>NDFRT</td>\n",
       "      <td>35019</td>\n",
       "      <td>34504</td>\n",
       "      <td>1.970587</td>\n",
       "      <td>522</td>\n",
       "      <td>24662</td>\n",
       "      <td>32074</td>\n",
       "      <td>32080</td>\n",
       "      <td>2.000374</td>\n",
       "      <td>22452</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>5</td>\n",
       "      <td>LOINC</td>\n",
       "      <td>174513</td>\n",
       "      <td>152683</td>\n",
       "      <td>1.749818</td>\n",
       "      <td>73518</td>\n",
       "      <td>7905</td>\n",
       "      <td>100871</td>\n",
       "      <td>152558</td>\n",
       "      <td>3.024814</td>\n",
       "      <td>6349</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>5</th>\n",
       "      <td>6</td>\n",
       "      <td>ICD9CM</td>\n",
       "      <td>22534</td>\n",
       "      <td>22531</td>\n",
       "      <td>1.999734</td>\n",
       "      <td>3</td>\n",
       "      <td>4485</td>\n",
       "      <td>22407</td>\n",
       "      <td>22406</td>\n",
       "      <td>1.999911</td>\n",
       "      <td>4434</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>6</th>\n",
       "      <td>7</td>\n",
       "      <td>WHO-ART</td>\n",
       "      <td>1852</td>\n",
       "      <td>2997</td>\n",
       "      <td>3.236501</td>\n",
       "      <td>3</td>\n",
       "      <td>2826</td>\n",
       "      <td>1725</td>\n",
       "      <td>2872</td>\n",
       "      <td>3.329855</td>\n",
       "      <td>2811</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>7</th>\n",
       "      <td>8</td>\n",
       "      <td>MESH</td>\n",
       "      <td>165166</td>\n",
       "      <td>24182</td>\n",
       "      <td>0.292821</td>\n",
       "      <td>145652</td>\n",
       "      <td>3842</td>\n",
       "      <td>16947</td>\n",
       "      <td>21596</td>\n",
       "      <td>2.548652</td>\n",
       "      <td>2623</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>8</th>\n",
       "      <td>9</td>\n",
       "      <td>ICD10</td>\n",
       "      <td>12446</td>\n",
       "      <td>11256</td>\n",
       "      <td>1.808774</td>\n",
       "      <td>1190</td>\n",
       "      <td>2328</td>\n",
       "      <td>11132</td>\n",
       "      <td>11131</td>\n",
       "      <td>1.999820</td>\n",
       "      <td>2288</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>9</th>\n",
       "      <td>10</td>\n",
       "      <td>CHMO</td>\n",
       "      <td>2966</td>\n",
       "      <td>3071</td>\n",
       "      <td>2.070802</td>\n",
       "      <td>3</td>\n",
       "      <td>1423</td>\n",
       "      <td>2964</td>\n",
       "      <td>3071</td>\n",
       "      <td>2.072200</td>\n",
       "      <td>1423</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>10</th>\n",
       "      <td>11</td>\n",
       "      <td>HL7</td>\n",
       "      <td>10319</td>\n",
       "      <td>10600</td>\n",
       "      <td>2.054463</td>\n",
       "      <td>1049</td>\n",
       "      <td>1395</td>\n",
       "      <td>9146</td>\n",
       "      <td>10475</td>\n",
       "      <td>2.290619</td>\n",
       "      <td>1374</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>11</th>\n",
       "      <td>12</td>\n",
       "      <td>OMIM</td>\n",
       "      <td>81821</td>\n",
       "      <td>39359</td>\n",
       "      <td>0.962076</td>\n",
       "      <td>44110</td>\n",
       "      <td>27437</td>\n",
       "      <td>37587</td>\n",
       "      <td>39234</td>\n",
       "      <td>2.087637</td>\n",
       "      <td>1291</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>12</th>\n",
       "      <td>13</td>\n",
       "      <td>CRISP</td>\n",
       "      <td>9040</td>\n",
       "      <td>11551</td>\n",
       "      <td>2.555531</td>\n",
       "      <td>3</td>\n",
       "      <td>831</td>\n",
       "      <td>8913</td>\n",
       "      <td>11426</td>\n",
       "      <td>2.563895</td>\n",
       "      <td>829</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>13</th>\n",
       "      <td>14</td>\n",
       "      <td>MAMO</td>\n",
       "      <td>101</td>\n",
       "      <td>103</td>\n",
       "      <td>2.039604</td>\n",
       "      <td>1</td>\n",
       "      <td>681</td>\n",
       "      <td>101</td>\n",
       "      <td>103</td>\n",
       "      <td>2.039604</td>\n",
       "      <td>681</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>14</th>\n",
       "      <td>15</td>\n",
       "      <td>ICPC</td>\n",
       "      <td>875</td>\n",
       "      <td>1443</td>\n",
       "      <td>3.298286</td>\n",
       "      <td>60</td>\n",
       "      <td>446</td>\n",
       "      <td>691</td>\n",
       "      <td>1318</td>\n",
       "      <td>3.814761</td>\n",
       "      <td>423</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>15</th>\n",
       "      <td>16</td>\n",
       "      <td>TAO</td>\n",
       "      <td>3372</td>\n",
       "      <td>4983</td>\n",
       "      <td>2.955516</td>\n",
       "      <td>146</td>\n",
       "      <td>209</td>\n",
       "      <td>3227</td>\n",
       "      <td>4983</td>\n",
       "      <td>3.088317</td>\n",
       "      <td>208</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>16</th>\n",
       "      <td>17</td>\n",
       "      <td>SNMI</td>\n",
       "      <td>42194</td>\n",
       "      <td>39457</td>\n",
       "      <td>1.870266</td>\n",
       "      <td>2739</td>\n",
       "      <td>6091</td>\n",
       "      <td>3536</td>\n",
       "      <td>3535</td>\n",
       "      <td>1.999434</td>\n",
       "      <td>116</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>17</th>\n",
       "      <td>18</td>\n",
       "      <td>NDDF</td>\n",
       "      <td>27574</td>\n",
       "      <td>125</td>\n",
       "      <td>0.009067</td>\n",
       "      <td>27449</td>\n",
       "      <td>3181</td>\n",
       "      <td>92</td>\n",
       "      <td>91</td>\n",
       "      <td>1.978261</td>\n",
       "      <td>24</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>18</th>\n",
       "      <td>19</td>\n",
       "      <td>RXNORM</td>\n",
       "      <td>118555</td>\n",
       "      <td>125</td>\n",
       "      <td>0.002109</td>\n",
       "      <td>118430</td>\n",
       "      <td>29416</td>\n",
       "      <td>92</td>\n",
       "      <td>91</td>\n",
       "      <td>1.978261</td>\n",
       "      <td>10</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>19</th>\n",
       "      <td>20</td>\n",
       "      <td>VANDF</td>\n",
       "      <td>25408</td>\n",
       "      <td>125</td>\n",
       "      <td>0.009839</td>\n",
       "      <td>25283</td>\n",
       "      <td>479</td>\n",
       "      <td>92</td>\n",
       "      <td>91</td>\n",
       "      <td>1.978261</td>\n",
       "      <td>4</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>20</th>\n",
       "      <td>21</td>\n",
       "      <td>RCD</td>\n",
       "      <td>11325</td>\n",
       "      <td>6893</td>\n",
       "      <td>1.217307</td>\n",
       "      <td>4446</td>\n",
       "      <td>667</td>\n",
       "      <td>49</td>\n",
       "      <td>53</td>\n",
       "      <td>2.163265</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "     #  ontology       N       E         k      cc       T      N'      E'  \\\n",
       "0    1  SNOMEDCT  315684  467027  2.958826      60  110859  315205  466607   \n",
       "1    2       CPT   13219   13235  2.002421       3   44815   13092   13110   \n",
       "2    3    MEDDRA   66506   31863  0.958199   43493   71580   22889   31738   \n",
       "3    4     NDFRT   35019   34504  1.970587     522   24662   32074   32080   \n",
       "4    5     LOINC  174513  152683  1.749818   73518    7905  100871  152558   \n",
       "5    6    ICD9CM   22534   22531  1.999734       3    4485   22407   22406   \n",
       "6    7   WHO-ART    1852    2997  3.236501       3    2826    1725    2872   \n",
       "7    8      MESH  165166   24182  0.292821  145652    3842   16947   21596   \n",
       "8    9     ICD10   12446   11256  1.808774    1190    2328   11132   11131   \n",
       "9   10      CHMO    2966    3071  2.070802       3    1423    2964    3071   \n",
       "10  11       HL7   10319   10600  2.054463    1049    1395    9146   10475   \n",
       "11  12      OMIM   81821   39359  0.962076   44110   27437   37587   39234   \n",
       "12  13     CRISP    9040   11551  2.555531       3     831    8913   11426   \n",
       "13  14      MAMO     101     103  2.039604       1     681     101     103   \n",
       "14  15      ICPC     875    1443  3.298286      60     446     691    1318   \n",
       "15  16       TAO    3372    4983  2.955516     146     209    3227    4983   \n",
       "16  17      SNMI   42194   39457  1.870266    2739    6091    3536    3535   \n",
       "17  18      NDDF   27574     125  0.009067   27449    3181      92      91   \n",
       "18  19    RXNORM  118555     125  0.002109  118430   29416      92      91   \n",
       "19  20     VANDF   25408     125  0.009839   25283     479      92      91   \n",
       "20  21       RCD   11325    6893  1.217307    4446     667      49      53   \n",
       "\n",
       "          k'      T'  \n",
       "0   2.960657  110441  \n",
       "1   2.002750   44651  \n",
       "2   2.773210   42746  \n",
       "3   2.000374   22452  \n",
       "4   3.024814    6349  \n",
       "5   1.999911    4434  \n",
       "6   3.329855    2811  \n",
       "7   2.548652    2623  \n",
       "8   1.999820    2288  \n",
       "9   2.072200    1423  \n",
       "10  2.290619    1374  \n",
       "11  2.087637    1291  \n",
       "12  2.563895     829  \n",
       "13  2.039604     681  \n",
       "14  3.814761     423  \n",
       "15  3.088317     208  \n",
       "16  1.999434     116  \n",
       "17  1.978261      24  \n",
       "18  1.978261      10  \n",
       "19  1.978261       4  \n",
       "20  2.163265       0  "
      ]
     },
     "execution_count": 35,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "df_onto.sort_values(\"T'\", ascending=False, inplace=True)\n",
    "df_onto.reset_index(inplace=True, drop=True)\n",
    "df_onto.loc[:,'#'] = df_onto.index + 1 \n",
    "df_onto\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 36,
   "metadata": {},
   "outputs": [],
   "source": [
    "%%capture cap --no-stderr\n",
    "\n",
    "fn = os.path.join(SUMMARY_OUTPUT,'summary_ontologies_transitions_{}.{}'.format(YEAR,'csv'))\n",
    "df_onto.to_csv(fn, index=None)\n",
    "print('{} saved!'.format(fn))\n",
    "\n",
    "fn = os.path.join(SUMMARY_OUTPUT,'summary_ontologies_transitions_{}.{}'.format(YEAR,'latex'))\n",
    "txt = df_onto.to_latex(index=False, float_format=lambda x: '%.2f' % x, bold_rows=[0])\n",
    "with open(fn, 'w') as f:\n",
    "    f.write(txt)\n",
    "    f.write('\\n')\n",
    "print('{} saved!'.format(fn))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 37,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "/bigdata/lespin/bioportal/summary/summary_ontologies_transitions_2015.csv saved!\n",
      "/bigdata/lespin/bioportal/summary/summary_ontologies_transitions_2015.latex saved!\n",
      "\n",
      "2019-02-12 23:44:27\t/bigdata/lespin/bioportal/logs/summary_2019-02-12_23.log saved!\n"
     ]
    }
   ],
   "source": [
    "print(cap.stdout)\n",
    "log(LOG_OUTPUT, SU, cap)\n",
    "del(cap)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 38,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "#        11.000000\n",
       "N     54309.000000\n",
       "E     41814.904762\n",
       "k         1.715359\n",
       "cc    23245.857143\n",
       "T     16455.142857\n",
       "N'    28706.285714\n",
       "E'    39455.666667\n",
       "k'        2.414027\n",
       "T'    11675.142857\n",
       "dtype: float64"
      ]
     },
     "execution_count": 38,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "df_onto.mean()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
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