Incorrect zero-based VCF file

[ethering]

Hi,
I'm using SURVIVOR (v1.0.7) for the first time and trying out some test data.
I've generated a params file using
SURVIVOR simSV test_params.param
and then simulated the SVs onto a reference genome.
SURVIVOR simSV ref.fasta test_params.param 0.1 0 simulated

Upon viewing the generated simulated.vcf file, I see that the VCF file is using zero-based coordinates when VCF uses 1-based coordinates.
Here are the first 16 characters of my reference sequence:

>SJAP_Chr1
CACCAAAAACCCTAAG

Here are the first 16 characters of my simulated sequence:

>SJAP_Chr1
AACAAAAAAGCCTAAA

and here are the lines in the VCF file that relate to the variants (the VCF header states 'source=Sniffles').

#CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT
SJAP_Chr1       0       SNP0SURVIVOR    C       A       PRECISE;SVMETHOD=SURVIVOR_sim;SVLEN=1   GT:GL:GQ:FT:RC:DR:DV:RR:RV      1/1
SJAP_Chr1       3       SNP1SURVIVOR    C       A       PRECISE;SVMETHOD=SURVIVOR_sim;SVLEN=1   GT:GL:GQ:FT:RC:DR:DV:RR:RV      1/1
SJAP_Chr1       9       SNP2SURVIVOR    C       G       PRECISE;SVMETHOD=SURVIVOR_sim;SVLEN=1   GT:GL:GQ:FT:RC:DR:DV:RR:RV      1/1
SJAP_Chr1       15      SNP3SURVIVOR    G       A       PRECISE;SVMETHOD=SURVIVOR_sim;SVLEN=1   GT:GL:GQ:FT:RC:DR:DV:RR:RV

As you can see, the first variant is at position zero and then the subsequent co-ordinates are also zero-based. The actual 'POS' values should be 1, 4, 10, and 16.

Based on my initial use of SURVIVOR, I have two other comments:

1. The 'simulated.bed' file is not in BED format, so perhaps it would be better to give it a different file extension
2. I can't find any command line help for the simSV method. Typing SURVIVOR simSV --help gives the stdout of Parameter file generated and produces a file called --help