After clicking the 
button, follow the steps below to launch JupyterLab, run your analyses, and save your results.
See also: VICE Starting JupyterLab App | VICE Webinar | Visual Interactive Computing Environment(VICE) Guide
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Register for a free account or go to log in page. |
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Log in with your CyVerse ID. |
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On the panel Patmatch-JupyterLab, click Launch Analysis. Optional: Rename the analysis something meaningful. Optional: At this point click 'Parameters' drop-down and browse to your own data already stored within your Cyverse-associated data repository and 'Add' to have the data included upon start-up. (Note: the added files will be located in the vice directory that will be one-level up from the working directory at start-up. Once the session starts, simply use the command mv ../vice/* . to move the files to the start-up working directory.) You can always add data already in your Cyverse-associated data repository or stored locally later. |
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Wait for a notification to show up in to top right corner (alarm bell), click the alarm bell icon to expand the notification window, and then click Access your running analysis here. |
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The launch panel appears. It may take several minutes for the application to launch. |
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When JupyterLab has launched, double-click the index.ipynb file. |
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Click on a notebook description in the list to launch it. |
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When finished with your work, click Refresh in the Analyses panel, then click on the 3-dot menu button on the far right. Click Complete and Save Outputs. Alternatively: download the processed notebook and any files generated to your local machine from within JupyterLab. |
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To cancel an analysis, click the Analyses menu button and choose cancel and delete to delete an analysis. |