forked from hawkjo/champ
/
setup.py
36 lines (34 loc) · 1.51 KB
/
setup.py
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from setuptools import setup
from champ.constants import VERSION
from distutils.extension import Extension
import numpy as np
if __name__ == '__main__':
setup(
name='champ',
packages=['champ', 'champ.controller'],
ext_modules=[Extension("champ.adapters_cython", ["champ/adapters_cython.c"], include_dirs=[np.get_include()])],
version=VERSION,
entry_points={
'console_scripts': [
'champ = champ.main:main'
]
},
include_package_data=True,
zip_safe=False,
data_files=[('notebooks', ['notebooks/all-lda-kd-fitting.ipynb',
'notebooks/data-analysis.ipynb',
'notebooks/genomic-kd-fitting.ipynb',
'notebooks/lda-intensity-estimation.ipynb',
'notebooks/thermodynamics.ipynb'])],
description='Processes CHAMP image data',
url='http://www.finkelsteinlab.org',
keywords=['DNA', 'protein', 'illumina', 'bioinformatics', 'crispr'],
classifiers=['Development Status :: 3 - Alpha',
'Natural Language :: English',
'Intended Audience :: Science/Research',
'License :: Freely Distributable',
'Operating System :: POSIX :: Linux',
'Programming Language :: Python :: 2.7',
'Topic :: Scientific/Engineering :: Bio-Informatics',
]
)