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accommodating changes in extraction of uncertainty/variability #61

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annecori opened this issue May 16, 2024 · 3 comments · May be fixed by epiverse-trace/epiparameter#305
Open

accommodating changes in extraction of uncertainty/variability #61

annecori opened this issue May 16, 2024 · 3 comments · May be fixed by epiverse-trace/epiparameter#305

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@annecori
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We will need to change the way the pairs of mean/sds are stored in Marburg, Lassa, Ebola and SARS to match the way this is done in Zika - so post processing the current dbs for Marburg etc so the users sees something which looks like ZIka
this will make interfacing with external tools such as epiparameters much easier
@ruthmccabe
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and will impact interaction with epiparameter: https://epiverse-trace.github.io/epiparameter/dev/articles/data_from_epireview.html

@cm401 cm401 linked a pull request May 16, 2024 that will close this issue
- use epireview functions to get parameters epiverse-trace/epiparameter#305
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@cm401
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cm401 commented May 16, 2024

We have a PR to update the vignette. Plan to add Anne's & Anton's Ebola example as a vignette...
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@kellymccain28
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Agreed that ideally we would modify the datasets for Ebola, Lassa, SARS, and Marburg to match how it will be extracted from zika onwards to avoid any confusion amongst the users of the database and streamline any analyses

@sangeetabhatia03 sangeetabhatia03 mentioned this issue Jun 5, 2024
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- use epireview functions to get parameters epiverse-trace/epiparameter
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@annecori @cm401 @ruthmccabe @kellymccain28