{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":513566064,"defaultBranch":"master","name":"wf-human-variation","ownerLogin":"epi2me-labs","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-07-13T15:02:36.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/60506060?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1714810477.0","currentOid":""},"activityList":{"items":[{"before":"b82338d3d6425c647891a760963412fb7e60b57b","after":"5651930a05a1406d30eee479afb8b39fe36d95ff","ref":"refs/heads/master","pushedAt":"2024-05-04T08:14:36.000Z","pushType":"push","commitsCount":62,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'humvar-base-image' into 'dev'\n\nBump ezcharts in humvar base image\n\nSee merge request epi2melabs/workflows/wf-human-variation!258","shortMessageHtmlLink":"Merge branch 'humvar-base-image' into 'dev'"}},{"before":"c78dcdad3fc14ff82b864d038484b37de6c16675","after":"5651930a05a1406d30eee479afb8b39fe36d95ff","ref":"refs/heads/prerelease","pushedAt":"2024-05-04T00:21:38.000Z","pushType":"push","commitsCount":10,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'humvar-base-image' into 'dev'\n\nBump ezcharts in humvar base image\n\nSee merge request epi2melabs/workflows/wf-human-variation!258","shortMessageHtmlLink":"Merge branch 'humvar-base-image' into 'dev'"}},{"before":"89b481033c62faa4f5822841cc468271c3c58494","after":"c78dcdad3fc14ff82b864d038484b37de6c16675","ref":"refs/heads/prerelease","pushedAt":"2024-05-02T14:41:02.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3978' into 'dev'\n\nReplace readstats with histograms [CW-3978]\n\nCloses CW-3978\n\nSee merge request epi2melabs/workflows/wf-human-variation!241","shortMessageHtmlLink":"Merge branch 'CW-3978' into 'dev'"}},{"before":"43e49d631adb016e08f558f8b22e16617a189626","after":"89b481033c62faa4f5822841cc468271c3c58494","ref":"refs/heads/prerelease","pushedAt":"2024-05-01T23:21:27.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-4034' into 'dev'\n\nUpdate Clair3 and Longphase [CW-4034]\n\nCloses CW-4034\n\nSee merge request epi2melabs/workflows/wf-human-variation!254","shortMessageHtmlLink":"Merge branch 'CW-4034' into 'dev'"}},{"before":"7df97b92190ee758556dad1a4a68add38ee70979","after":"43e49d631adb016e08f558f8b22e16617a189626","ref":"refs/heads/prerelease","pushedAt":"2024-05-01T10:07:39.000Z","pushType":"push","commitsCount":22,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-4003-sv-filtering' into 'dev'\n\nSV filtering [CW-4003]\n\nCloses CW-4003\n\nSee merge request epi2melabs/workflows/wf-human-variation!246","shortMessageHtmlLink":"Merge branch 'CW-4003-sv-filtering' into 'dev'"}},{"before":"f7dafb77f39fb51e9657ce3ec3dab9787a711889","after":"7df97b92190ee758556dad1a4a68add38ee70979","ref":"refs/heads/prerelease","pushedAt":"2024-04-23T10:57:28.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3926' into 'dev'\n\nRun mod by contig [CW-3926]\n\nCloses CW-3926\n\nSee merge request epi2melabs/workflows/wf-human-variation!236","shortMessageHtmlLink":"Merge branch 'CW-3926' into 'dev'"}},{"before":"38660773b8dddd4f7cf4099eb92f3e91176df3ca","after":"f7dafb77f39fb51e9657ce3ec3dab9787a711889","ref":"refs/heads/prerelease","pushedAt":"2024-04-22T22:13:16.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-2390-automatic-sex-determination' into 'dev'\n\nAutomatic sex determination [CW-2390]\n\nCloses CW-2390\n\nSee merge request epi2melabs/workflows/wf-human-variation!237","shortMessageHtmlLink":"Merge branch 'CW-2390-automatic-sex-determination' into 'dev'"}},{"before":"efe6f162a728c8fa979204ad05ddec8fe5e85bba","after":"38660773b8dddd4f7cf4099eb92f3e91176df3ca","ref":"refs/heads/prerelease","pushedAt":"2024-04-22T14:05:26.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'fix-help-cmd' into 'dev'\n\nFix help cmd\n\nSee merge request epi2melabs/workflows/wf-human-variation!232","shortMessageHtmlLink":"Merge branch 'fix-help-cmd' into 'dev'"}},{"before":"1ffbb21b6fc6172654032254e5babc6f6f4f3144","after":"efe6f162a728c8fa979204ad05ddec8fe5e85bba","ref":"refs/heads/prerelease","pushedAt":"2024-04-19T15:57:00.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3632' into 'dev'\n\nPRECISE filtering and reporting [CW-3632]\n\nCloses CW-3632\n\nSee merge request epi2melabs/workflows/wf-human-variation!209","shortMessageHtmlLink":"Merge branch 'CW-3632' into 'dev'"}},{"before":"727c25761bbdd13c048688265de891bd0100447c","after":"1ffbb21b6fc6172654032254e5babc6f6f4f3144","ref":"refs/heads/prerelease","pushedAt":"2024-04-12T11:21:45.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3851' into 'dev'\n\nUpdate modkit [CW-3851]\n\nCloses CW-3851\n\nSee merge request epi2melabs/workflows/wf-human-variation!231","shortMessageHtmlLink":"Merge branch 'CW-3851' into 'dev'"}},{"before":"10edd224718b5848c1e8fbedbb23c2d495485416","after":"727c25761bbdd13c048688265de891bd0100447c","ref":"refs/heads/prerelease","pushedAt":"2024-04-11T19:04:57.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3856' into 'dev'\n\nDrop joint phasing [CW-3856]\n\nCloses CW-3856\n\nSee merge request epi2melabs/workflows/wf-human-variation!234","shortMessageHtmlLink":"Merge branch 'CW-3856' into 'dev'"}},{"before":"11e61164e31a86eaf14bdd3584a47c402c8a5f76","after":"10edd224718b5848c1e8fbedbb23c2d495485416","ref":"refs/heads/prerelease","pushedAt":"2024-04-04T11:17:11.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3834' into 'dev'\n\nTweak phasing behaviour [CW-3834]\n\nCloses CW-3834\n\nSee merge request epi2melabs/workflows/wf-human-variation!230","shortMessageHtmlLink":"Merge branch 'CW-3834' into 'dev'"}},{"before":"b82338d3d6425c647891a760963412fb7e60b57b","after":"11e61164e31a86eaf14bdd3584a47c402c8a5f76","ref":"refs/heads/prerelease","pushedAt":"2024-04-02T18:37:50.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3777' into 'dev'\n\nPhase GVCF using VCF tags [CW-3777]\n\nCloses CW-3777\n\nSee merge request epi2melabs/workflows/wf-human-variation!228","shortMessageHtmlLink":"Merge branch 'CW-3777' into 'dev'"}},{"before":"52e369843194301d5677619c1fa81d1c790ed17c","after":"b82338d3d6425c647891a760963412fb7e60b57b","ref":"refs/heads/master","pushedAt":"2024-03-27T18:53:36.000Z","pushType":"push","commitsCount":24,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'tag_210' into 'dev'\n\nTag v2.1.0\n\nSee merge request epi2melabs/workflows/wf-human-variation!227","shortMessageHtmlLink":"Merge branch 'tag_210' into 'dev'"}},{"before":"ae857ab96ad5dab7e8745035649cb1e286722813","after":"b82338d3d6425c647891a760963412fb7e60b57b","ref":"refs/heads/prerelease","pushedAt":"2024-03-27T18:39:41.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'tag_210' into 'dev'\n\nTag v2.1.0\n\nSee merge request epi2melabs/workflows/wf-human-variation!227","shortMessageHtmlLink":"Merge branch 'tag_210' into 'dev'"}},{"before":"2b8310c8d40c241969976285b0b37315b00a679c","after":"ae857ab96ad5dab7e8745035649cb1e286722813","ref":"refs/heads/prerelease","pushedAt":"2024-03-27T13:42:02.000Z","pushType":"push","commitsCount":8,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3739' into 'dev'\n\nDrop memory usage\n\nCloses CW-3739\n\nSee merge request epi2melabs/workflows/wf-human-variation!220","shortMessageHtmlLink":"Merge branch 'CW-3739' into 'dev'"}},{"before":"ff4b871d538547842034b35e73906404a9379fc4","after":"2b8310c8d40c241969976285b0b37315b00a679c","ref":"refs/heads/prerelease","pushedAt":"2024-03-21T16:59:30.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3798-update-spectre' into 'dev'\n\nUpdate Spectre tag [CW-3798]\n\nCloses CW-3798\n\nSee merge request epi2melabs/workflows/wf-human-variation!223","shortMessageHtmlLink":"Merge branch 'CW-3798-update-spectre' into 'dev'"}},{"before":"ffa013a0a9ceb8182d55d8339cdb494a5550729a","after":"ff4b871d538547842034b35e73906404a9379fc4","ref":"refs/heads/prerelease","pushedAt":"2024-03-19T13:27:48.000Z","pushType":"push","commitsCount":10,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3776' into 'dev'\n\nUpdate to Clair3 v1.0.6 [CW-3776]\n\nCloses CW-3776\n\nSee merge request epi2melabs/workflows/wf-human-variation!221","shortMessageHtmlLink":"Merge branch 'CW-3776' into 'dev'"}},{"before":"52e369843194301d5677619c1fa81d1c790ed17c","after":"ffa013a0a9ceb8182d55d8339cdb494a5550729a","ref":"refs/heads/prerelease","pushedAt":"2024-03-12T09:50:35.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3717-update-snpeff' into 'dev'\n\nUpdate clinvar [CW-3717]\n\nCloses CW-3717\n\nSee merge request epi2melabs/workflows/wf-human-variation!214","shortMessageHtmlLink":"Merge branch 'CW-3717-update-snpeff' into 'dev'"}},{"before":"86117a3cdd51d732ce34f801fd158121fcb03748","after":"52e369843194301d5677619c1fa81d1c790ed17c","ref":"refs/heads/master","pushedAt":"2024-03-06T18:37:02.000Z","pushType":"push","commitsCount":22,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3674-spectre-annotation' into 'dev'\n\nSpectre annotation [CW-3673]\n\nCloses CW-3673\n\nSee merge request epi2melabs/workflows/wf-human-variation!212","shortMessageHtmlLink":"Merge branch 'CW-3674-spectre-annotation' into 'dev'"}},{"before":"36ddd978a11f159857fe39259df6d07290afeccc","after":"52e369843194301d5677619c1fa81d1c790ed17c","ref":"refs/heads/prerelease","pushedAt":"2024-03-06T18:22:03.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3674-spectre-annotation' into 'dev'\n\nSpectre annotation [CW-3673]\n\nCloses CW-3673\n\nSee merge request epi2melabs/workflows/wf-human-variation!212","shortMessageHtmlLink":"Merge branch 'CW-3674-spectre-annotation' into 'dev'"}},{"before":"fee73dbc7fc4d506959bbcfe8f46db4914884744","after":"36ddd978a11f159857fe39259df6d07290afeccc","ref":"refs/heads/prerelease","pushedAt":"2024-03-06T16:25:28.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3669' into 'dev'\n\nFix failedQCReport crashing\n\nCloses CW-3669\n\nSee merge request epi2melabs/workflows/wf-human-variation!210","shortMessageHtmlLink":"Merge branch 'CW-3669' into 'dev'"}},{"before":"dd33dd8e97097699a142a0101eae11cdc6801801","after":"fee73dbc7fc4d506959bbcfe8f46db4914884744","ref":"refs/heads/prerelease","pushedAt":"2024-03-01T20:05:18.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3324' into 'dev'\n\nbam_ingress will generate a CRAM if downsampling is required [CW-3324]\n\nCloses CW-3324\n\nSee merge request epi2melabs/workflows/wf-human-variation!189","shortMessageHtmlLink":"Merge branch 'CW-3324' into 'dev'"}},{"before":"ebcd6fa057f91f0831fc2c67d36f95707e6cf7bd","after":"dd33dd8e97097699a142a0101eae11cdc6801801","ref":"refs/heads/prerelease","pushedAt":"2024-02-23T16:13:44.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3496-update-alignment-report' into 'dev'\n\nAdd some stats to alignment report [CW-3496]\n\nCloses CW-3496\n\nSee merge request epi2melabs/workflows/wf-human-variation!206","shortMessageHtmlLink":"Merge branch 'CW-3496-update-alignment-report' into 'dev'"}},{"before":"86117a3cdd51d732ce34f801fd158121fcb03748","after":"ebcd6fa057f91f0831fc2c67d36f95707e6cf7bd","ref":"refs/heads/prerelease","pushedAt":"2024-02-15T08:48:24.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3397_pt2' into 'dev'\n\nForgot to drop -root [CW-3397]\n\nCloses CW-3397\n\nSee merge request epi2melabs/workflows/wf-human-variation!202","shortMessageHtmlLink":"Merge branch 'CW-3397_pt2' into 'dev'"}},{"before":"79ddc4467ddcb4b7a5e139847b8c785795a5d07c","after":"86117a3cdd51d732ce34f801fd158121fcb03748","ref":"refs/heads/master","pushedAt":"2024-02-12T22:36:22.000Z","pushType":"push","commitsCount":18,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'cw-3520' into 'dev'\n\nFix ownership of wf-human-snp models\n\nSee merge request epi2melabs/workflows/wf-human-variation!200","shortMessageHtmlLink":"Merge branch 'cw-3520' into 'dev'"}},{"before":"927189b229eeca8285adea29dbbecc3a23657e0a","after":"86117a3cdd51d732ce34f801fd158121fcb03748","ref":"refs/heads/prerelease","pushedAt":"2024-02-12T22:35:10.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'cw-3520' into 'dev'\n\nFix ownership of wf-human-snp models\n\nSee merge request epi2melabs/workflows/wf-human-variation!200","shortMessageHtmlLink":"Merge branch 'cw-3520' into 'dev'"}},{"before":"67345c585462b5e415927a607f55e653b7b8b99c","after":"927189b229eeca8285adea29dbbecc3a23657e0a","ref":"refs/heads/prerelease","pushedAt":"2024-02-12T14:04:05.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'uncram-str' into 'dev'\n\nUnCRAM intermediate contigs for STR [CW-3507]\n\nSee merge request epi2melabs/workflows/wf-human-variation!198","shortMessageHtmlLink":"Merge branch 'uncram-str' into 'dev'"}},{"before":"3f928069560af3db859d0868035ba9cc0ddd0530","after":"67345c585462b5e415927a607f55e653b7b8b99c","ref":"refs/heads/prerelease","pushedAt":"2024-02-05T18:21:09.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-3451-pyfaidx-error' into 'dev'\n\nPyfaidx error [CW-3451]\n\nCloses CW-3451\n\nSee merge request epi2melabs/workflows/wf-human-variation!195","shortMessageHtmlLink":"Merge branch 'CW-3451-pyfaidx-error' into 'dev'"}},{"before":"e73b62dbf3a06528291036fc77ce96534646c9cc","after":"3f928069560af3db859d0868035ba9cc0ddd0530","ref":"refs/heads/prerelease","pushedAt":"2024-02-02T23:15:21.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"epi2melabs-bot","name":null,"path":"/epi2melabs-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/75738791?s=80&v=4"},"commit":{"message":"Merge branch 'CW-2654-update-straglr' into 'dev'\n\nUpdate Straglr [CW-2654]\n\nCloses CW-2654\n\nSee merge request epi2melabs/workflows/wf-human-variation!192","shortMessageHtmlLink":"Merge branch 'CW-2654-update-straglr' into 'dev'"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEQVRhKAA","startCursor":null,"endCursor":null}},"title":"Activity ยท epi2me-labs/wf-human-variation"}