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Support unresolved IDT monomers (no structure, IDT only) #1912

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olganaz opened this issue Apr 15, 2024 · 0 comments
Open

Support unresolved IDT monomers (no structure, IDT only) #1912

olganaz opened this issue Apr 15, 2024 · 0 comments

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@olganaz
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olganaz commented Apr 15, 2024

Background
If user imports modified RNA in IDT notation which contains monomers not found in Monomer library, this should not be interpreted as an error. There should be possible to load such monomers from IDT and KET formats and save to these formats.

Requirements

  1. If there is no monomer with corresponding alias in a library, then system should Import IDT monomer as monomer with IDT alias only (no structure)
  2. Attachment points
    4 attachment points should be available for this type of monomers: R1/R2 - backbone (default connection), R3/R4 - sidechain
  3. Attempt to save macromolecules with unknown monomers to file formats other than IDT and KET should result in error.
@olganaz olganaz added this to Product Backlog in Indigo via automation Apr 15, 2024
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