/
NAMESPACE
134 lines (133 loc) 路 3.62 KB
/
NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(empty_plot)
export(get_milestone_palette_names)
export(linearise_cells)
export(plot_dendro)
export(plot_dimred)
export(plot_graph)
export(plot_heatmap)
export(plot_linearised_comparison)
export(plot_onedim)
export(plot_strip)
export(plot_topology)
export(theme_clean)
export(theme_graph)
import(dynwrap)
import(ggplot2)
import(methods)
importFrom(GA,ga)
importFrom(assertthat,assert_that)
importFrom(dplyr,.data)
importFrom(dplyr,arrange)
importFrom(dplyr,bind_cols)
importFrom(dplyr,bind_rows)
importFrom(dplyr,case_when)
importFrom(dplyr,desc)
importFrom(dplyr,do)
importFrom(dplyr,filter)
importFrom(dplyr,first)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,inner_join)
importFrom(dplyr,lag)
importFrom(dplyr,last)
importFrom(dplyr,lead)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_all)
importFrom(dplyr,mutate_at)
importFrom(dplyr,mutate_if)
importFrom(dplyr,n)
importFrom(dplyr,near)
importFrom(dplyr,pull)
importFrom(dplyr,rename)
importFrom(dplyr,rename_all)
importFrom(dplyr,rename_at)
importFrom(dplyr,rename_if)
importFrom(dplyr,right_join)
importFrom(dplyr,row_number)
importFrom(dplyr,sample_n)
importFrom(dplyr,select)
importFrom(dplyr,slice)
importFrom(dplyr,summarise)
importFrom(dplyr,summarise_at)
importFrom(dplyr,summarise_if)
importFrom(dplyr,top_n)
importFrom(dplyr,transmute)
importFrom(dplyr,ungroup)
importFrom(dplyr,vars)
importFrom(dyndimred,dimred_landmark_mds)
importFrom(dyndimred,dimred_mds)
importFrom(dyndimred,dimred_umap)
importFrom(dyndimred,list_dimred_methods)
importFrom(dynutils,"%all_in%")
importFrom(dynutils,calculate_distance)
importFrom(dynutils,extract_row_to_list)
importFrom(dynutils,inherit_default_params)
importFrom(dynutils,is_sparse)
importFrom(dynutils,list_as_tibble)
importFrom(dynutils,scale_minmax)
importFrom(dynutils,scale_quantile)
importFrom(ggforce,geom_link2)
importFrom(ggraph,create_layout)
importFrom(ggraph,geom_edge_elbow)
importFrom(ggraph,geom_edge_fan)
importFrom(ggraph,geom_edge_link)
importFrom(ggraph,geom_edge_loop)
importFrom(ggraph,geom_node_label)
importFrom(ggraph,get_edges)
importFrom(ggraph,ggraph)
importFrom(ggraph,scale_edge_alpha_discrete)
importFrom(ggraph,scale_edge_linetype_manual)
importFrom(ggraph,scale_edge_width_manual)
importFrom(ggrepel,geom_label_repel)
importFrom(grDevices,col2rgb)
importFrom(grDevices,colours)
importFrom(grDevices,rainbow)
importFrom(grDevices,rgb)
importFrom(grDevices,rgb2hsv)
importFrom(grid,arrow)
importFrom(grid,unit)
importFrom(patchwork,wrap_plots)
importFrom(purrr,"%>%")
importFrom(purrr,discard)
importFrom(purrr,keep)
importFrom(purrr,list_modify)
importFrom(purrr,map)
importFrom(purrr,map2)
importFrom(purrr,map2_dbl)
importFrom(purrr,map2_df)
importFrom(purrr,map_chr)
importFrom(purrr,map_dbl)
importFrom(purrr,map_df)
importFrom(purrr,map_int)
importFrom(purrr,pmap)
importFrom(purrr,pmap_df)
importFrom(purrr,set_names)
importFrom(stats,approx)
importFrom(stats,as.dendrogram)
importFrom(stats,as.dist)
importFrom(stats,dnorm)
importFrom(stats,hclust)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(tibble,as_tibble)
importFrom(tibble,column_to_rownames)
importFrom(tibble,deframe)
importFrom(tibble,enframe)
importFrom(tibble,lst)
importFrom(tibble,rownames_to_column)
importFrom(tibble,tibble)
importFrom(tibble,tribble)
importFrom(tidygraph,as_tbl_graph)
importFrom(tidygraph,tbl_graph)
importFrom(tidyr,crossing)
importFrom(tidyr,everything)
importFrom(tidyr,gather)
importFrom(tidyr,nest)
importFrom(tidyr,one_of)
importFrom(tidyr,spread)
importFrom(tidyr,starts_with)
importFrom(tidyr,unnest)
importFrom(utils,head)
importFrom(utils,tail)