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Enhance the cvterms module #59

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2 tasks done
GwennyGit opened this issue Jan 31, 2023 · 1 comment
Open
2 tasks done

Enhance the cvterms module #59

GwennyGit opened this issue Jan 31, 2023 · 1 comment
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enhancement New feature or request refactoring changes in the code functionality
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New functions tow...

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@GwennyGit
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GwennyGit commented Jan 31, 2023 •
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This issue was opened to track all changes to the cvterms module.
@GwennyGit GwennyGit added enhancement New feature or request refactoring changes in the code functionality labels Jan 31, 2023
GwennyGit added a commit that referenced this issue Jan 31, 2023
@GwennyGit
Updated add_cv_term_genes to handle lab strains #59
5ca0e7d 
If lab_strain is set to True the biological qualifier isHomologTo will be used.
@famosab
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famosab commented Feb 1, 2023

add_curie_set in combination with generate_cvterm seems to cover the functions of the add_cv_term... in the cvterms module (see issue #50) -> can we modify cvterms to use the logic of generate_cvterm in combination with add_curie_set?

GwennyGit added a commit that referenced this issue Feb 8, 2023
@GwennyGit
Added InChI-Key to metabol_db_dict in cvterms #52 #59
8eeb1ed
famosab added a commit that referenced this issue Feb 9, 2023
@famosab
remove obsolete import #59
b8a3f4d
GwennyGit added a commit that referenced this issue Feb 27, 2023
@GwennyGit
Changed mapping in cvterms dicts for BioCyc #59
3f812ed
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enhancement New feature or request refactoring changes in the code functionality
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New functions towards future versions
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@famosab @GwennyGit