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would it be helpful to add ln to configuration instructions? #235

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jessicalumian opened this issue Oct 19, 2022 · 0 comments
Open

would it be helpful to add ln to configuration instructions? #235

jessicalumian opened this issue Oct 19, 2022 · 0 comments

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@jessicalumian
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jessicalumian commented Oct 19, 2022

whenever i have run my own metagenomes following this, I don't move the actual metagenomes into the trim/ directory because they're already on farm somewhere else and they're big. I used ln to create a symbolic link and rename the files to end in .trim.fq.gz

would it be helpful to add this to instructions?

example

ln /home/jemizzi/vanda-MAGs-refine/DATA/BulkMat.fastq.gz BulkMat.trim.fq.gz
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