This file describes the steps necessary to execute the "reproduce".sh file to produce the main results of this repository.
- Make sure you have conda, or preferably mamba installed. See either of the links below for instructions on installing the program of your choice for your machine.
- conda: https://conda.io/projects/conda/en/latest/user-guide/install/index.html
- mamba: https://mamba.readthedocs.io/en/latest/installation.html
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Once installed, open the terminal so that your present working directory (pwd) is the one associated with the location of the local version of this repository on your machine.
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Navigate to the "binder" folder and make sure a file called "environment.yml" lives there. Run the following command:
- mamba env create -f environment.yal
Once this command has completed, you are ready to run the reproduce.sh script!