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Data that needs to be uploaded to bedbase:
The text was updated successfully, but these errors were encountered:
LOLA structure: . ├── hg19 │ ├── cistrome_cistrome │ ├── cistrome_epigenome │ ├── codex │ ├── encode_segmentation │ ├── encode_tfbs │ ├── sheffield_dnase │ └── ucsc_features ├── hg38 │ ├── cistrome_cistrome │ ├── cistrome_epigenome │ ├── codex │ ├── encode_segmentation │ ├── encode_tfbs │ ├── sheffield_dnase │ └── ucsc_features ├── mm10 │ ├── codex │ ├── encodeTFBSmm10 │ └── ucsc_features ├── mm9 │ ├── codex │ ├── encodeTFBSmm9 │ └── ucsc_features ├── rn6 │ ├── codex │ ├── encodeTFBSrn6 │ └── ucsc_features └── test ├── cistrome_cistrome └── encode_tfbs
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ENCODE: https://github.com/databio/bedbase_encode
An update: On Tuesday we uploaded: lola_hg19_cistrome_epigenome. not hg38 https://pephub.databio.org/databio/lola_hg19_cistrome_epigenome?tag=default
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Data that needs to be uploaded to bedbase:
codex(not hg38)Faild: 'coriellDelDup', 'rmsk', 'switchDbTss'
The text was updated successfully, but these errors were encountered: