/
models.py
2075 lines (1591 loc) · 80.8 KB
/
models.py
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import torch
import utils
import os
from functools import reduce
import numpy as np
import torch.nn as nn
import pickle
from LSTMLinear import LSTMModel
from pairwise.gadgets import Recurrent, Pairs
import pdb
from models_helper import *
time_index = {"t_s": 0, "t_s_orig": 1, "t_e": 2, "t_e_orig": 3, "t_str": 4, "t_i": 5}
class TimePlex_base(torch.nn.Module):
def __init__(self, entity_count, relation_count, timeInterval_count, embedding_dim, clamp_v=None, reg=2,
batch_norm=False, unit_reg=False, normalize_time=True, init_embed=None, time_smoothing_params=None, flag_add_reverse=0,
has_cuda=True, time_reg_wt = 0.0, emb_reg_wt=1.0, srt_wt=1.0, ort_wt=1.0, sot_wt=0.0):
super(TimePlex_base, self).__init__()
# self.flag_add_reverse = flag_add_reverse
# if self.flag_add_reverse==1:
# relation_count*=2
if init_embed is None:
init_embed = {}
for embed_type in ["E_im", "E_re", "R_im", "R_re", "T_im", "T_re"]:
init_embed[embed_type] = None
self.entity_count = entity_count
self.embedding_dim = embedding_dim
self.relation_count = relation_count
self.timeInterval_count = timeInterval_count
self.has_cuda = has_cuda
self.E_im = torch.nn.Embedding(self.entity_count, self.embedding_dim) if init_embed["E_im"] is None else \
init_embed["E_im"]
self.E_re = torch.nn.Embedding(self.entity_count, self.embedding_dim) if init_embed["E_re"] is None else \
init_embed["E_re"]
self.R_im = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim) if init_embed["R_im"] is None else \
init_embed["R_im"]
self.R_re = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim) if init_embed["R_re"] is None else \
init_embed["R_re"]
# E embeddingsfor (s,r,t) and (o,r,t) component
self.E2_im = torch.nn.Embedding(self.entity_count, self.embedding_dim)
self.E2_re = torch.nn.Embedding(self.entity_count, self.embedding_dim)
# R embeddings for (s,r,t) component
self.Rs_im = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim)
self.Rs_re = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim)
# R embeddings for (o,r,t) component
self.Ro_im = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim)
self.Ro_re = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim)
# time embeddings for (s,r,t)
self.Ts_im = torch.nn.Embedding(self.timeInterval_count + 2,
self.embedding_dim) # if init_embed["T_im"] is None else init_embed["T_im"] #padding for smoothing: 1 for start and 1 for end
self.Ts_re = torch.nn.Embedding(self.timeInterval_count + 2,
self.embedding_dim) # if init_embed["T_re"] is None else init_embed["T_re"]#padding for smoothing: 1 for start and 1 for end
# time embeddings for (o,r,t)
self.To_im = torch.nn.Embedding(self.timeInterval_count + 2,
self.embedding_dim) # if init_embed["T_im"] is None else init_embed["T_im"] #padding for smoothing: 1 for start and 1 for end
self.To_re = torch.nn.Embedding(self.timeInterval_count + 2,
self.embedding_dim) # if init_embed["T_re"] is None else init_embed["T_re"]#padding for smoothing: 1 for start and 1 for end
##
self.pad_max = torch.tensor([timeInterval_count + 1])
self.pad_min = torch.tensor([0])
if self.has_cuda:
self.pad_max = self.pad_max.cuda()
self.pad_min = self.pad_min.cuda()
# '''
torch.nn.init.normal_(self.E_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.E_im.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_im.weight.data, 0, 0.05)
torch.nn.init.normal_(self.E2_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.E2_im.weight.data, 0, 0.05)
torch.nn.init.normal_(self.Rs_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.Rs_im.weight.data, 0, 0.05)
torch.nn.init.normal_(self.Ro_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.Ro_im.weight.data, 0, 0.05)
# init time embeddings
torch.nn.init.normal_(self.Ts_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.Ts_im.weight.data, 0, 0.05)
torch.nn.init.normal_(self.To_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.To_im.weight.data, 0, 0.05)
# '''
self.minimum_value = -self.embedding_dim * self.embedding_dim
self.clamp_v = clamp_v
self.unit_reg = unit_reg
self.reg = reg
print("Regularization value: in time_complex_fast: ", reg)
self.normalize_time = normalize_time
self.batch_norm = batch_norm
print("batch_norm not being used")
# --srt, ort weights --#
self.srt_wt = srt_wt
self.ort_wt = ort_wt
self.sot_wt = sot_wt
self.time_reg_wt = time_reg_wt
self.emb_reg_wt = emb_reg_wt
def forward(self, s, r, o, t, flag_debug=0):
if t is not None:
# if not t.shape[-1]==1:
if (t.shape[-1] == len(time_index)): # pick which dimension to index
t = t[:, :, time_index["t_s"]]
else:
t = t[:, time_index["t_s"], :]
s_im = self.E_im(s) if s is not None else self.E_im.weight.unsqueeze(0)
r_im = self.R_im(r) if r is not None else self.R_im.weight.unsqueeze(0)
o_im = self.E_im(o) if o is not None else self.E_im.weight.unsqueeze(0)
s_re = self.E_re(s) if s is not None else self.E_re.weight.unsqueeze(0)
r_re = self.R_re(r) if r is not None else self.R_re.weight.unsqueeze(0)
o_re = self.E_re(o) if o is not None else self.E_re.weight.unsqueeze(0)
# embeddings for s,r,t component
rs_im = self.Rs_im(r) if r is not None else self.Rs_im.weight.unsqueeze(0)
rs_re = self.Rs_re(r) if r is not None else self.Rs_re.weight.unsqueeze(0)
# embeddings for o,r,t component
ro_im = self.Ro_im(r) if r is not None else self.Ro_im.weight.unsqueeze(0)
ro_re = self.Ro_re(r) if r is not None else self.Ro_re.weight.unsqueeze(0)
'''
##added extra 2 embeddings (padding) for semless time smoothing
Need to remove those extra embedding while calculating scores for all posibble time points
##Currenty there is a minor bug in code -- time smoothing may not work properly until you add 1 to all i/p time points
as seen tim tim_complex_smooth model --Resolved --underflow padding is pad_max and overflow padding is pad_max+1
'''
t_re = self.Ts_re(t) if t is not None else self.Ts_re.weight.unsqueeze(0)[:, :-2, :]
t_im = self.Ts_im(t) if t is not None else self.Ts_im.weight.unsqueeze(0)[:, :-2, :]
t2_re = self.To_re(t) if t is not None else self.To_re.weight.unsqueeze(0)[:, :-2, :]
t2_im = self.To_im(t) if t is not None else self.To_im.weight.unsqueeze(0)[:, :-2, :]
# if flag_debug:
# print("Time embedd data")
# print("t_re", t_re.shape, torch.mean(t_re), torch.std(t_re))
# print("t_im", t_im.shape, torch.mean(t_im), torch.std(t_im))
#########
#########
# '''
if t is None:
##start time scores
srt = complex_3way_simple(s_re, s_im, rs_re, rs_im, t_re, t_im)
# ort = complex_3way_simple(o_re, o_im, ro_re, ro_im, t_re, t_im)
ort = complex_3way_simple(t_re, t_im, ro_re, ro_im, o_re, o_im)
sot = complex_3way_simple(s_re, s_im, t_re, t_im, o_re, o_im)
score = self.srt_wt * srt + self.ort_wt * ort + self.sot_wt * sot
# --for inverse facts--#
r = r + self.relation_count / 2
rs_re = self.Rs_re(r)
rs_im = self.Rs_im(r)
ro_re = self.Ro_re(r)
ro_im = self.Ro_im(r)
srt = complex_3way_simple(o_re, o_im, rs_re, rs_im, t_re, t_im)
ort = complex_3way_simple(t_re, t_im, ro_re, ro_im, s_re, s_im)
sot = complex_3way_simple(o_re, o_im, t_re, t_im, s_re, s_im)
score_inv = self.srt_wt * srt + self.ort_wt * ort + self.sot_wt * sot
# ------------------- #
# result = score
result = score + score_inv
return result
if s is not None and o is not None and s.shape == o.shape: # positive samples
sro = complex_3way_simple(s_re, s_im, r_re, r_im, o_re, o_im)
srt = complex_3way_simple(s_re, s_im, rs_re, rs_im, t_re, t_im)
# ort = complex_3way_simple(o_re, o_im, ro_re, ro_im, t_re, t_im)
ort = complex_3way_simple(t_re, t_im, ro_re, ro_im, o_re, o_im)
# sot = complex_3way_simple(s_re, s_im, t2_re, t2_im, o_re, o_im)
sot = complex_3way_simple(s_re, s_im, t_re, t_im, o_re, o_im)
else:
sro = complex_3way_fullsoftmax(s, r, o, s_re, s_im, r_re, r_im, o_re, o_im, self.embedding_dim)
srt = complex_3way_fullsoftmax(s, r, t, s_re, s_im, rs_re, rs_im, t_re, t_im, self.embedding_dim)
# ort = complex_3way_fullsoftmax(o, r, t, o_re, o_im, ro_re, ro_im, t_re, t_im, self.embedding_dim)
ort = complex_3way_fullsoftmax(t, r, o, t_re, t_im, ro_re, ro_im, o_re, o_im, self.embedding_dim)
# sot = complex_3way_fullsoftmax(s, t, o, s_re, s_im, t2_re, t2_im, o_re, o_im, self.embedding_dim)
sot = complex_3way_fullsoftmax(s, t, o, s_re, s_im, t_re, t_im, o_re, o_im, self.embedding_dim)
result = sro + self.srt_wt * srt + self.ort_wt * ort + self.sot_wt * sot
# result = srt
return result
def regularizer(self, s, r, o, t, reg_val=0):
if t is not None:
# if not t.shape[-1]==1:
if (t.shape[-1] == len(time_index)): # pick which dimension to index
t = t[:, :, time_index["t_s"]]
else:
t = t[:, time_index["t_s"], :]
# if (t.shape[-1] == len(time_index)): # pick which dimension to index
# t = t[:, :, 0]
# else:
# t = t[:, 0, :]
s_im = self.E_im(s)
r_im = self.R_im(r)
o_im = self.E_im(o)
s_re = self.E_re(s)
r_re = self.R_re(r)
o_re = self.E_re(o)
ts_re = self.Ts_re(t)
ts_im = self.Ts_im(t)
to_re = self.To_re(t)
to_im = self.To_im(t)
####
s2_im = self.E2_im(s)
s2_re = self.E2_re(s)
o2_im = self.E2_im(o)
o2_re = self.E2_re(o)
rs_re = self.Rs_re(r)
rs_im = self.Rs_im(r)
ro_re = self.Ro_re(r)
ro_im = self.Ro_im(r)
####
# te_re = self.Te_re(t)
# te_im = self.Te_im(t)
if reg_val:
self.reg = reg_val
# print("CX reg", reg_val)
#--time regularization--#
time_reg = 0.0
if self.time_reg_wt!=0:
ts_re_all = (self.Ts_re.weight.unsqueeze(0))#[:, :-2, :])
ts_im_all = (self.Ts_im.weight.unsqueeze(0))#[:, :-2, :])
to_re_all = (self.To_re.weight.unsqueeze(0))#[:, :-2, :])
to_im_all = (self.To_im.weight.unsqueeze(0))#[:, :-2, :])
time_reg = time_regularizer(ts_re_all, ts_im_all) + time_regularizer(to_re_all, to_im_all)
time_reg *= self.time_reg_wt
# ------------------#
if self.reg == 2:
# return (s_re**2+o_re**2+r_re**2+s_im**2+r_im**2+o_im**2 + tr_re**2 + tr_im**2).sum()
# return (s_re**2+o_re**2+r_re**2+s_im**2+r_im**2+o_im**2).sum() + (tr_re**2 + tr_im**2).sum()
rs_sum = (rs_re ** 2 + rs_im ** 2).sum()
ro_sum = (ro_re ** 2 + ro_im ** 2).sum()
o2_sum = (o2_re ** 2 + o2_im ** 2).sum()
s2_sum = (s2_re ** 2 + s2_im ** 2).sum()
ts_sum = (ts_re ** 2 + ts_im ** 2).sum()
to_sum = (to_re ** 2 + to_im ** 2).sum()
ret = (s_re ** 2 + o_re ** 2 + r_re ** 2 + s_im ** 2 + r_im ** 2 + o_im ** 2).sum() + ts_sum + to_sum + rs_sum + ro_sum
ret = self.emb_reg_wt * (ret/ s.shape[0])
elif self.reg == 3:
factor = [torch.sqrt(s_re ** 2 + s_im ** 2),
torch.sqrt(o_re ** 2 + o_im ** 2),
torch.sqrt(r_re ** 2 + r_im ** 2),
torch.sqrt(rs_re ** 2 + rs_im ** 2),
torch.sqrt(ro_re ** 2 + ro_im ** 2),
torch.sqrt(ts_re ** 2 + ts_im ** 2),
torch.sqrt(to_re ** 2 + to_im ** 2)]
factor_wt = [1, 1, 1, 1, 1, 1, 1]
reg = 0
for ele,wt in zip(factor,factor_wt):
reg += wt* torch.sum(torch.abs(ele) ** 3)
ret = self.emb_reg_wt * (reg / s.shape[0])
else:
print("Unknown reg for complex model")
assert (False)
return ret + time_reg
def normalize_complex(self, T_re, T_im):
with torch.no_grad():
re = T_re.weight
im = T_im.weight
norm = re ** 2 + im ** 2
T_re.weight.div_(norm)
T_im.weight.div_(norm)
return
def post_epoch(self):
if (self.normalize_time):
with torch.no_grad():
# normalize Tr
# self.normalize_complex(self.Tr_re, self.Tr_im)
# norm=torch.sqrt(self.Tr_re.weight**2 + self.Tr_im.weight**2)
# self.Tr_re.weight.div_(norm)
# self.Tr_im.weight.div_(norm)
# self.Tr_re.weight.div_(torch.norm(self.Tr_re.weight, dim=-1, keepdim=True))
# self.Tr_im.weight.div_(torch.norm(self.Tr_im.weight, dim=-1, keepdim=True))
self.Ts_re.weight.div_(torch.norm(self.Ts_re.weight, dim=-1, keepdim=True))
self.Ts_im.weight.div_(torch.norm(self.Ts_im.weight, dim=-1, keepdim=True))
self.To_re.weight.div_(torch.norm(self.To_re.weight, dim=-1, keepdim=True))
self.To_im.weight.div_(torch.norm(self.To_im.weight, dim=-1, keepdim=True))
# normalize Te
# self.normalize_complex(self.Te_re, self.Te_im)
# self.Te_re.weight.div_(torch.norm(self.Te_re.weight, dim=-1, keepdim=True))
# self.Te_im.weight.div_(torch.norm(self.Te_im.weight, dim=-1, keepdim=True))
if (self.unit_reg):
self.E_im.weight.data.div_(self.E_im.weight.data.norm(2, dim=-1, keepdim=True))
self.E_re.weight.data.div_(self.E_re.weight.data.norm(2, dim=-1, keepdim=True))
self.R_im.weight.data.div_(self.R_im.weight.data.norm(2, dim=-1, keepdim=True))
self.R_re.weight.data.div_(self.R_re.weight.data.norm(2, dim=-1, keepdim=True))
return ""
class TComplex_lx(torch.nn.Module):
def __init__(self, entity_count, relation_count, timeInterval_count, embedding_dim, clamp_v=None, reg=2,
batch_norm=False, unit_reg=False, normalize_time=False, init_embed=None, time_smoothing_params=None, emb_init=1e-2, time_reg_wt=0.0,
emb_reg_wt = 1.0, flag_add_reverse = True, has_cuda=True):
super(TComplex_lx, self).__init__()
if init_embed is None:
init_embed = {}
for embed_type in ["E_im", "E_re", "R_im", "R_re", "T_im", "T_re"]:
init_embed[embed_type] = None
self.entity_count = entity_count
self.embedding_dim = embedding_dim
self.relation_count = relation_count
self.timeInterval_count = timeInterval_count
self.has_cuda = has_cuda
self.E_im = torch.nn.Embedding(self.entity_count, self.embedding_dim) if init_embed["E_im"] is None else \
init_embed["E_im"]
self.E_re = torch.nn.Embedding(self.entity_count, self.embedding_dim) if init_embed["E_re"] is None else \
init_embed["E_re"]
self.R_im = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim) if init_embed["R_im"] is None else \
init_embed["R_im"]
self.R_re = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim) if init_embed["R_re"] is None else \
init_embed["R_re"]
self.T_im = torch.nn.Embedding(self.timeInterval_count + 2,
self.embedding_dim) # if init_embed["T_im"] is None else init_embed["T_im"] #padding for smoothing: 1 for start and 1 for end
self.T_re = torch.nn.Embedding(self.timeInterval_count + 2,
self.embedding_dim) # if init_embed["T_re"] is None else init_embed["T_re"]#padding for smoothing: 1 for start and 1 for end
self.pad_max = torch.tensor([timeInterval_count + 1])
self.pad_min = torch.tensor([0])
if self.has_cuda:
self.pad_max = self.pad_max.cuda()
self.pad_min = self.pad_min.cuda()
# '''
torch.nn.init.normal_(self.E_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.E_im.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_im.weight.data, 0, 0.05)
# init time embeddings
torch.nn.init.normal_(self.T_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.T_im.weight.data, 0, 0.05)
# '''
'''
torch.nn.init.constant_(self.E_re.weight.data, emb_init)
torch.nn.init.constant_(self.E_im.weight.data, emb_init)
torch.nn.init.constant_(self.R_re.weight.data, emb_init)
torch.nn.init.constant_(self.R_im.weight.data, emb_init)
# init time embeddings
torch.nn.init.constant_(self.T_re.weight.data, emb_init)
torch.nn.init.constant_(self.T_im.weight.data, emb_init)
# '''
# self.E_re.weight.data *= emb_init
# self.E_im.weight.data *= emb_init
# self.R_re.weight.data *= emb_init
# self.R_im.weight.data *= emb_init
# self.T_re.weight.data *= emb_init
# self.T_im.weight.data *= emb_init
self.minimum_value = -self.embedding_dim * self.embedding_dim
self.clamp_v = clamp_v
self.unit_reg = unit_reg
self.reg = reg
print("Regularization value: in time_complex_fast: ", reg)
self.normalize_time = normalize_time
self.batch_norm = batch_norm
print("batch_norm not being used")
self.time_reg_wt = time_reg_wt
self.emb_reg_wt = emb_reg_wt
def forward(self, s, r, o, t, flag_debug=0):
if t is not None:
if (t.shape[-1] == len(time_index)): # pick which dimension to index
t = t[:, :, time_index["t_s"]]
else:
t = t[:, time_index["t_s"], :]
s_im = self.E_im(s) if s is not None else self.E_im.weight.unsqueeze(0)
r_im = self.R_im(r) if r is not None else self.R_im.weight.unsqueeze(0)
o_im = self.E_im(o) if o is not None else self.E_im.weight.unsqueeze(0)
s_re = self.E_re(s) if s is not None else self.E_re.weight.unsqueeze(0)
r_re = self.R_re(r) if r is not None else self.R_re.weight.unsqueeze(0)
o_re = self.E_re(o) if o is not None else self.E_re.weight.unsqueeze(0)
'''
##added extra 2 embeddings (padding) for semless time smoothing
Need to remove those extra embedding while calculating scores for all posibble time points
##Currenty there is a minor bug in code -- time smoothing may not work properly until you add 1 to all i/p time points
as seen tim tim_complex_smooth model --Resolved --underflow padding is pad_max and overflow padding is pad_max+1
'''
t_re = self.T_re(t) if t is not None else self.T_re.weight.unsqueeze(0)[:, :-2, :]
t_im = self.T_im(t) if t is not None else self.T_im.weight.unsqueeze(0)[:, :-2, :]
if flag_debug:
print("Time embedd data")
print("t_re", t_re.shape, torch.mean(t_re), torch.std(t_re))
print("t_im", t_im.shape, torch.mean(t_im), torch.std(t_im))
#########
#########
# '''
r_re_t, r_im_t = complex_hadamard(r_re, r_im, t_re, t_im)
if t is None:
##start time scores
srto = complex_3way_simple(s_re, s_im, r_re_t, r_im_t, o_re, o_im)
result = srto
return result
if s is not None and o is not None and s.shape == o.shape: # positive samples
srto = complex_3way_simple(s_re, s_im, r_re_t, r_im_t, o_re, o_im)
else:
srto = complex_3way_fullsoftmax(s, r, o, s_re, s_im, r_re_t, r_im_t, o_re, o_im, self.embedding_dim)
result = srto
return result
def regularizer(self, s, r, o, t, reg_val=0):
if t is not None:
if (t.shape[-1] == len(time_index)): # pick which dimension to index
t = t[:, :, time_index["t_s"]]
else:
t = t[:, time_index["t_s"], :]
# # if not t.shape[-1]==1:
# if (t.shape[-1] == len(time_index)): # pick which dimension to index
# t = t[:, :, 0]
# else:
# t = t[:, 0, :]
s_im = self.E_im(s)
r_im = self.R_im(r)
o_im = self.E_im(o)
s_re = self.E_re(s)
r_re = self.R_re(r)
o_re = self.E_re(o)
t_re = self.T_re(t)
t_im = self.T_im(t)
r_re_t, r_im_t = complex_hadamard(r_re, r_im, t_re, t_im)
if reg_val:
self.reg = reg_val
#--time regularization--#
t_re_all = (self.T_re.weight.unsqueeze(0))#[:, :-2, :])
t_im_all = (self.T_im.weight.unsqueeze(0))#[:, :-2, :])
time_reg = self.time_reg_wt * time_regularizer(t_re_all, t_im_all)
# ------------------#
if self.reg == 2:
ret = (s_re**2 + o_re**2 + r_re**2 + s_im**2 + r_im**2 + o_im**2 + t_re**2 + t_im**2).sum()
ret = self.emb_reg_wt * ret
elif self.reg == 3:
factor = [torch.sqrt(s_re ** 2 + s_im ** 2),
torch.sqrt(o_re ** 2 + o_im ** 2),
torch.sqrt(r_re ** 2 + r_im ** 2),
# torch.sqrt(t_re ** 2 + t_im ** 2)]
torch.sqrt(r_re_t ** 2 + r_im_t ** 2)]
factor_wt = [1, 1, 1, 1]
# factor_wt = [1, 1, 1]
reg = 0
for ele,wt in zip(factor,factor_wt):
reg += wt* torch.sum(torch.abs(ele) ** 3)
# pdb.set_trace()
ret = self.emb_reg_wt * reg / factor[0].shape[0]
else:
print("Unknown reg for complex model")
assert (False)
return ret + time_reg
def post_epoch(self):
if (self.normalize_time):
print("\nNormalizing time")
with torch.no_grad():
self.T_re.weight.div_(torch.norm(self.T_re.weight, dim=-1, keepdim=True))
self.T_im.weight.div_(torch.norm(self.T_im.weight, dim=-1, keepdim=True))
if (self.unit_reg):
print("\nApplying unit regularization")
self.E_im.weight.data.div_(self.E_im.weight.data.norm(2, dim=-1, keepdim=True))
self.E_re.weight.data.div_(self.E_re.weight.data.norm(2, dim=-1, keepdim=True))
self.R_im.weight.data.div_(self.R_im.weight.data.norm(2, dim=-1, keepdim=True))
self.R_re.weight.data.div_(self.R_re.weight.data.norm(2, dim=-1, keepdim=True))
return ""
class TNTComplex_lx(torch.nn.Module):
def __init__(self, entity_count, relation_count, timeInterval_count, embedding_dim, clamp_v=None, reg=2,
batch_norm=False, unit_reg=False, normalize_time=False, init_embed=None, time_smoothing_params=None, emb_init=1e-2, time_reg_wt=0.0,
emb_reg_wt = 1.0, flag_add_reverse = True, has_cuda=True):
super(TNTComplex_lx, self).__init__()
if init_embed is None:
init_embed = {}
for embed_type in ["E_im", "E_re", "R_im", "R_re", "T_im", "T_re", "R_no_time_re", "R_no_time_im"]:
init_embed[embed_type] = None
self.entity_count = entity_count
self.embedding_dim = embedding_dim
self.relation_count = relation_count
self.timeInterval_count = timeInterval_count
self.has_cuda = has_cuda
self.E_im = torch.nn.Embedding(self.entity_count, self.embedding_dim) if init_embed["E_im"] is None else \
init_embed["E_im"]
self.E_re = torch.nn.Embedding(self.entity_count, self.embedding_dim) if init_embed["E_re"] is None else \
init_embed["E_re"]
self.R_im = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim) if init_embed["R_im"] is None else \
init_embed["R_im"]
self.R_re = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim) if init_embed["R_re"] is None else \
init_embed["R_re"]
self.R_no_time_im = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim) if init_embed["R_no_time_im"] is None else \
init_embed["R_no_time_im"]
self.R_no_time_re = torch.nn.Embedding(2 * self.relation_count, self.embedding_dim) if init_embed["R_no_time_re"] is None else \
init_embed["R_no_time_re"]
self.T_im = torch.nn.Embedding(self.timeInterval_count + 2,
self.embedding_dim) # if init_embed["T_im"] is None else init_embed["T_im"] #padding for smoothing: 1 for start and 1 for end
self.T_re = torch.nn.Embedding(self.timeInterval_count + 2,
self.embedding_dim) # if init_embed["T_re"] is None else init_embed["T_re"]#padding for smoothing: 1 for start and 1 for end
self.pad_max = torch.tensor([timeInterval_count + 1])
self.pad_min = torch.tensor([0])
if self.has_cuda:
self.pad_max = self.pad_max.cuda()
self.pad_min = self.pad_min.cuda()
# '''
torch.nn.init.normal_(self.E_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.E_im.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_im.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_no_time_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_no_time_im.weight.data, 0, 0.05)
# init time embeddings
torch.nn.init.normal_(self.T_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.T_im.weight.data, 0, 0.05)
# '''
'''
torch.nn.init.constant_(self.E_re.weight.data, emb_init)
torch.nn.init.constant_(self.E_im.weight.data, emb_init)
torch.nn.init.constant_(self.R_re.weight.data, emb_init)
torch.nn.init.constant_(self.R_im.weight.data, emb_init)
# init time embeddings
torch.nn.init.constant_(self.T_re.weight.data, emb_init)
torch.nn.init.constant_(self.T_im.weight.data, emb_init)
# '''
# self.E_re.weight.data *= emb_init
# self.E_im.weight.data *= emb_init
# self.R_re.weight.data *= emb_init
# self.R_im.weight.data *= emb_init
# self.T_re.weight.data *= emb_init
# self.T_im.weight.data *= emb_init
self.minimum_value = -self.embedding_dim * self.embedding_dim
self.clamp_v = clamp_v
self.unit_reg = unit_reg
self.reg = reg
print("Regularization value: in time_complex_fast: ", reg)
self.normalize_time = normalize_time
self.batch_norm = batch_norm
print("batch_norm not being used")
self.time_reg_wt = time_reg_wt
self.emb_reg_wt = emb_reg_wt
def forward(self, s, r, o, t, flag_debug=0):
if t is not None:
if (t.shape[-1] == len(time_index)): # pick which dimension to index
t = t[:, :, time_index["t_s"]]
else:
t = t[:, time_index["t_s"], :]
s_im = self.E_im(s) if s is not None else self.E_im.weight.unsqueeze(0)
r_im = self.R_im(r) if r is not None else self.R_im.weight.unsqueeze(0)
o_im = self.E_im(o) if o is not None else self.E_im.weight.unsqueeze(0)
s_re = self.E_re(s) if s is not None else self.E_re.weight.unsqueeze(0)
r_re = self.R_re(r) if r is not None else self.R_re.weight.unsqueeze(0)
o_re = self.E_re(o) if o is not None else self.E_re.weight.unsqueeze(0)
r_no_time_im = self.R_no_time_im(r) if r is not None else self.R_no_time_im.weight.unsqueeze(0)
r_no_time_re = self.R_no_time_re(r) if r is not None else self.R_no_time_re.weight.unsqueeze(0)
'''
##added extra 2 embeddings (padding) for semless time smoothing
Need to remove those extra embedding while calculating scores for all posibble time points
##Currenty there is a minor bug in code -- time smoothing may not work properly until you add 1 to all i/p time points
as seen tim tim_complex_smooth model --Resolved --underflow padding is pad_max and overflow padding is pad_max+1
'''
t_re = self.T_re(t) if t is not None else self.T_re.weight.unsqueeze(0)[:, :-2, :]
t_im = self.T_im(t) if t is not None else self.T_im.weight.unsqueeze(0)[:, :-2, :]
if flag_debug:
print("Time embedd data")
print("t_re", t_re.shape, torch.mean(t_re), torch.std(t_re))
print("t_im", t_im.shape, torch.mean(t_im), torch.std(t_im))
#########
#########
# '''
r_re_t, r_im_t = complex_hadamard(r_re, r_im, t_re, t_im)
r_re_t = r_re_t + r_no_time_re
r_im_t = r_im_t + r_no_time_im
if t is None:
##start time scores
srto = complex_3way_simple(s_re, s_im, r_re_t, r_im_t, o_re, o_im)
# for inverse facts
r = r + self.relation_count / 2
r_re = self.R_re(r)
r_im = self.R_im(r)
r_no_time_re = self.R_no_time_re(r)
r_no_time_im = self.R_no_time_im(r)
r_re_t, r_im_t = complex_hadamard(r_re, r_im, t_re, t_im)
r_re_t = r_re_t + r_no_time_re
r_im_t = r_im_t + r_no_time_im
srto_inv = complex_3way_simple(o_re, o_im, r_re_t, r_im_t, s_re, s_im)
# result = srto
result = srto + srto_inv
return result
if s is not None and o is not None and s.shape == o.shape: # positive samples
srto = complex_3way_simple(s_re, s_im, r_re_t, r_im_t, o_re, o_im)
else:
srto = complex_3way_fullsoftmax(s, r, o, s_re, s_im, r_re_t, r_im_t, o_re, o_im, self.embedding_dim)
result = srto
return result
def regularizer(self, s, r, o, t, reg_val=0):
if t is not None:
if (t.shape[-1] == len(time_index)): # pick which dimension to index
t = t[:, :, time_index["t_s"]]
else:
t = t[:, time_index["t_s"], :]
# # if not t.shape[-1]==1:
# if (t.shape[-1] == len(time_index)): # pick which dimension to index
# t = t[:, :, 0]
# else:
# t = t[:, 0, :]
s_im = self.E_im(s)
r_im = self.R_im(r)
o_im = self.E_im(o)
s_re = self.E_re(s)
r_re = self.R_re(r)
o_re = self.E_re(o)
t_re = self.T_re(t)
t_im = self.T_im(t)
r_no_time_re = self.R_no_time_re(r)
r_no_time_im = self.R_no_time_im(r)
r_re_t, r_im_t = complex_hadamard(r_re, r_im, t_re, t_im)
if reg_val:
self.reg = reg_val
#--time regularization--#
t_re_all = (self.T_re.weight.unsqueeze(0))#[:, :-2, :])
t_im_all = (self.T_im.weight.unsqueeze(0))#[:, :-2, :])
time_reg = self.time_reg_wt * time_regularizer(t_re_all, t_im_all)
# ------------------#
if self.reg == 2:
ret = (s_re**2 + o_re**2 + r_re**2 + s_im**2 + r_im**2 + o_im**2 + t_re**2 + t_im**2 + r_no_time_re**2 + r_no_time_im**2).sum()
ret = self.emb_reg_wt * (ret / s_re.shape[0])
elif self.reg == 3:
factor = [torch.sqrt(s_re ** 2 + s_im ** 2),
torch.sqrt(o_re ** 2 + o_im ** 2),
torch.sqrt(r_re ** 2 + r_im ** 2),
# torch.sqrt(t_re ** 2 + t_im ** 2)]
torch.sqrt(r_re_t ** 2 + r_im_t ** 2),
torch.sqrt(r_no_time_re ** 2 + r_no_time_im ** 2)]
factor_wt = [1, 1, 1, 1, 1]
# factor_wt = [1, 1, 1]
reg = 0
for ele,wt in zip(factor,factor_wt):
reg += wt* torch.sum(torch.abs(ele) ** 3)
# pdb.set_trace()
ret = self.emb_reg_wt * reg / factor[0].shape[0]
else:
print("Unknown reg for complex model")
assert (False)
return ret + time_reg
def post_epoch(self):
if (self.normalize_time):
print("\nNormalizing time")
with torch.no_grad():
self.T_re.weight.div_(torch.norm(self.T_re.weight, dim=-1, keepdim=True))
self.T_im.weight.div_(torch.norm(self.T_im.weight, dim=-1, keepdim=True))
if (self.unit_reg):
print("\nApplying unit regularization")
self.E_im.weight.data.div_(self.E_im.weight.data.norm(2, dim=-1, keepdim=True))
self.E_re.weight.data.div_(self.E_re.weight.data.norm(2, dim=-1, keepdim=True))
self.R_im.weight.data.div_(self.R_im.weight.data.norm(2, dim=-1, keepdim=True))
self.R_re.weight.data.div_(self.R_re.weight.data.norm(2, dim=-1, keepdim=True))
return ""
class TimePlex(torch.nn.Module):
def __init__(self, entity_count, relation_count, timeInterval_count, embedding_dim, batch_norm=False, reg=2,
train_kb=None,
has_cuda=True, freeze_weights=True,
model_path="", recurrent_args={}, pairs_args={}, pairs_wt=0.0, recurrent_wt=0.0, eval_batch_size=10, use_obj_scores=True,
srt_wt=1.0, ort_wt=1.0, sot_wt=0.0, base_model_inverse=False):
super(TimePlex, self).__init__()
# print("Hard-coding U2_gadget_wt!!")
# U2_gadget_wt = 5.0
# print("Hard-coding pairwise_gadget_wt!!")
# pairwise_gadget_wt = 1.0
self.entity_count = entity_count
self.relation_count = relation_count
print("Recurrent args:",recurrent_args)
print("Pairs args:",pairs_args)
# if not self.base_model_inverse:
# self.base_model = TimePlex_base(entity_count, relation_count, timeInterval_count,
# embedding_dim, reg=reg, srt_wt=srt_wt, ort_wt=ort_wt, sot_wt=sot_wt)
# else:
# self.base_model = TimePlex_base(entity_count, 2*relation_count, timeInterval_count,
# embedding_dim, reg=reg, srt_wt=srt_wt, ort_wt=ort_wt, sot_wt=sot_wt)
# --Load pretrained TimePlex(base) embeddings--#
if model_path != "":
print("Loading embeddings from model saved at {}".format(model_path))
state = torch.load(model_path)
self.base_model = TimePlex_base(**state['model_arguments'])
self.base_model.load_state_dict(state['model_weights'])
base_model_inverse = state['model_arguments'].get('flag_add_reverse',False)
print("Initialized base model (TimePlex)")
else:
raise Exception("Please provide path to Timeplex(base) embeddings")
# ----------#
self.embedding_dim = embedding_dim
self.base_model_inverse = base_model_inverse
print("***Base model inverse:{}".format(self.base_model_inverse))
# --Freezing base model--#
# '''
if freeze_weights:
print("Freezing base model weights")
for param in self.base_model.parameters():
param.requires_grad = False
else:
print("Not freezing base model weights")
self.freeze_weights = freeze_weights
# '''
# ----------------------#
self.minimum_value = -(embedding_dim * embedding_dim)
self.pairs_wt = pairs_wt
self.recurrent_wt = recurrent_wt
if pairs_wt!=0.0:
self.pairs = Pairs(train_kb, entity_count, relation_count, load_to_gpu=has_cuda,
eval_batch_size=eval_batch_size,
use_obj_scores=use_obj_scores, **pairs_args)
print("Initialized Pairs")
else:
print("Not Initializing Pairs")
if recurrent_wt!=0.0:
self.recurrent = Recurrent(train_kb, entity_count, relation_count, load_to_gpu=has_cuda,
eval_batch_size=eval_batch_size,
use_obj_scores=use_obj_scores, **recurrent_args)
print("Initialized Recurrent")
else:
print("Not Initializing Recurrent")
# pdb.set_trace()
def forward(self, s, r, o, t, flag_debug=False):
# if not self.base_model_inverse:
if not self.base_model_inverse or t is None:
base_score = self.base_model(s, r, o, t)
else:
rel_cnt = self.relation_count
try:
if s is None:
base_score = self.base_model(o, r + rel_cnt, s, t)
elif o is None:
base_score = self.base_model(s, r, o, t)
else:
base_score = self.base_model(s, r, o, t) + self.base_model(o, r + rel_cnt, s, t)
except:
pdb.set_trace()
pairs_score = self.pairs(s, r, o, t) if self.pairs_wt else 0.0
recurrent_score = self.recurrent(s, r, o, t) if self.recurrent_wt else 0.0
return base_score + self.pairs_wt * pairs_score + self.recurrent_wt * recurrent_score
def post_epoch(self):
base_post_epoch = self.base_model.post_epoch()
return base_post_epoch
def regularizer(self, s, r, o, t=None):
pairs_reg = self.pairs.regularizer(s, r, o, t) if self.pairs_wt else 0.0
recurrent_reg = self.recurrent.regularizer(s, r, o, t) if self.recurrent_wt else 0.0
# pdb.set_trace()
if self.freeze_weights:
return pairs_reg + recurrent_reg
else:
return pairs_reg + recurrent_reg + self.base_model.regularizer(s, r, o, t)
class time_transE(torch.nn.Module):
def __init__(self, entity_count, relation_count, timeInterval_count, embedding_dim, clamp_v=None, reg=0,
batch_norm=False, unit_reg=False, normalize_time=True, has_cuda=True, flag_add_reverse=0):
super(time_transE, self).__init__()
self.entity_count = entity_count
self.embedding_dim = embedding_dim
self.relation_count = relation_count
self.timeInterval_count = timeInterval_count
self.E = torch.nn.Embedding(self.entity_count, self.embedding_dim)
self.R = torch.nn.Embedding(self.relation_count, self.embedding_dim)
self.T = torch.nn.Embedding(self.timeInterval_count, self.embedding_dim)
'''
torch.nn.init.normal_(self.E_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.R_re.weight.data, 0, 0.05)
torch.nn.init.normal_(self.T_re.weight.data, 0, 0.05)
'''
self.minimum_value = self.embedding_dim * self.embedding_dim # opposite for transE
self.clamp_v = clamp_v
self.unit_reg = unit_reg
self.reg = reg
print("Regularization value:", reg)
self.normalize_time = normalize_time
'''
# init- for testing
# emb_dir='./debug/wiki12k_hyte_emb/'
emb_dir = './debug/yago11k_hyte_emb/'
print("Initializing with trained weights loaded from {}".format(emb_dir))
# emb_dir='./debug/'
ent_init = np.load(os.path.join(emb_dir, "ent_embedding.npy"))
rel_init = np.load(os.path.join(emb_dir, "rel_embedding.npy"))