Unable to install package

[halabikeren]

Hi,

I am trying to install the package in a linux environment using:
options(repos = c(
phyr = 'https://daijiang.r-universe.dev',
CRAN = 'https://cloud.r-project.org'))
install.packages('phyr')

And I get an error:

• installing source package ‘deldir’ ...
  ** package ‘deldir’ successfully unpacked and MD5 sums checked
  ** using staged installation
  ** libs
  Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() :
  argument is of length zero
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/deldir’
• installing source package ‘minqa’ ...
  ** package ‘minqa’ successfully unpacked and MD5 sums checked
  ** using staged installation
  ** libs
  Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() :
  argument is of length zero
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/minqa’
• installing source package ‘RcppEigen’ ...
  ** package ‘RcppEigen’ successfully unpacked and MD5 sums checked
  ** using staged installation
  ** libs
  Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() :
  argument is of length zero
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/RcppEigen’
• installing source package ‘png’ ...
  ** package ‘png’ successfully unpacked and MD5 sums checked
  ** using staged installation
  ** libs
  Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() :
  argument is of length zero
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/png’
• installing source package ‘jpeg’ ...
  ** package ‘jpeg’ successfully unpacked and MD5 sums checked
  ** using staged installation
  ** libs
  Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() :
  argument is of length zero
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/jpeg’
• installing source package ‘nloptr’ ...
  ** package ‘nloptr’ successfully unpacked and MD5 sums checked
  ** using staged installation
  checking whether the C++ compiler works... yes
  checking for C++ compiler default output file name... a.out
  checking for suffix of executables...
  checking whether we are cross compiling... no
  checking for suffix of object files... o
  checking whether the compiler supports GNU C++... yes
  checking whether /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ accepts -g... yes
  checking for /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ option to enable C++11 features... none needed
  checking how to run the C++ preprocessor... /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ -E
  checking whether the compiler supports GNU C++... (cached) yes
  checking whether /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ accepts -g... (cached) yes
  checking for /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ option to enable C++11 features... (cached) none needed
  checking for pkg-config... /usr/bin/pkg-config
  checking if pkg-config knows NLopt... yes
  checking for pkg-config checking NLopt version... insufficient: NLopt 2.7.0 or later is preferred.
  checking for cmake... /usr/local/bin/cmake
  using NLopt via local cmake build on x86_64
  set CMAKE_BIN=/usr/local/bin/cmake
  set CC=/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-cc
  set CFLAGS=-DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/include -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/include
  set CXX=
  set CXXFLAGS= -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/include
  set LDFLAGS=-Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib -Wl,-rpath-link,/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib -L/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib
  Could not detect C++ compiler with R CMD config.
  CMake Error at CMakeLists.txt:15 (cmake_minimum_required):
  CMake 3.2 or higher is required. You are running version 2.8.12.2

-- Configuring incomplete, errors occurred!
make: *** No targets specified and no makefile found. Stop.
make: *** No rule to make target 'install'. Stop.
mv: cannot stat 'nlopt/lib*': No such file or directory
cp: cannot stat 'nlopt/include/*': No such file or directory
configure: creating ./config.status
config.status: creating src/Makevars
** libs
Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() :
argument is of length zero

• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/nloptr’
• installing source package ‘RcppArmadillo’ ...
  ** package ‘RcppArmadillo’ successfully unpacked and MD5 sums checked
  ** using staged installation
  checking whether the C++ compiler works... yes
  checking for C++ compiler default output file name... a.out
  checking for suffix of executables...
  checking whether we are cross compiling... no
  checking for suffix of object files... o
  checking whether the compiler supports GNU C++... yes
  checking whether /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ accepts -g... yes
  checking for /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ option to enable C++11 features... none needed
  checking how to run the C++ preprocessor... /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ -E
  checking whether the compiler supports GNU C++... (cached) yes
  checking whether /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ accepts -g... (cached) yes
  checking for /groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/bin/x86_64-conda-linux-gnu-c++ option to enable C++11 features... (cached) none needed
  checking whether we have a suitable tempdir... /tmp
  checking whether R CMD SHLIB can already compile programs using OpenMP... no
  checking whether g++ version is sufficient... yes, with OpenMP as version 10.3.0
  checking for macOS... no
  checking LAPACK_LIBS... system LAPACK found
  checking for OpenMP... R was not built as a library
  missing
  configure: creating ./config.status
  config.status: creating inst/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h
  config.status: creating src/Makevars
  ** libs
  Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() :
  argument is of length zero
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/RcppArmadillo’
  ERROR: dependencies ‘deldir’, ‘RcppEigen’ are not available for package ‘interp’
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/interp’
  ERROR: dependencies ‘minqa’, ‘nloptr’, ‘RcppEigen’ are not available for package ‘lme4’
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/lme4’
  ERROR: dependencies ‘png’, ‘jpeg’, ‘interp’ are not available for package ‘latticeExtra’
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/latticeExtra’
  ERROR: dependencies ‘lme4’, ‘nloptr’, ‘latticeExtra’, ‘RcppArmadillo’ are not available for package ‘phyr’
• removing ‘/groups/itay_mayrose/halabikeren/miniconda3/envs/ppn/lib/R/library/phyr’

The downloaded source packages are in
‘/tmp/RtmpEVxjR2/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
There were 11 warnings (use warnings() to see them)

The package has not been installed:

library("phyr")
Error in library("phyr") : there is no package called ‘phyr’

The problem is not reproducible in Windows

Cheers!