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Add interactions from a reference network in NDEx #67

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AlexanderPico opened this issue Apr 22, 2021 · 1 comment
Open

Add interactions from a reference network in NDEx #67

AlexanderPico opened this issue Apr 22, 2021 · 1 comment
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script app idea Cytoscape functionality that could be implemented as a script app

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@AlexanderPico
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Obviously, this could be a CyNDEx app feature as well, but I suspect it's easier to implement as a script app.

Use case

  1. User starts with a network (or set of unconnected nodes)
  2. Apps > Add reference interactions > select from predetermined set of reference nets (or supply NDEx ID)
  3. Interactions are added

Alternative option:
2. Apps > Extend network > select from predetermined set of reference nets (or supply NDEx ID)
3. Interactions and nodes are added
@AlexanderPico AlexanderPico added the script app idea Cytoscape functionality that could be implemented as a script app label Apr 22, 2021
@AlexanderPico AlexanderPico self-assigned this Apr 22, 2021
@AlexanderPico
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If CORUM file is uploaded to NDEx, this would cover popular Krogan lab operation.

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