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createnumericalannotrow.qmd
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createnumericalannotrow.qmd
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---
title: "Numerical annotation rows"
author: "Cox Lab"
format:
html:
toc: true
toc-depth: 4
toc-expand: false
number-sections: true
number-depth: 4
editor: source
date: today
bibliography: references.bib
---
# General
- **Type:** - Matrix Processing
- **Heading:** - Annot. rows
- **Source code:** [CreateNumericalAnnotRow.cs](https://github.com/JurgenCox/perseus-plugins/blob/master/PerseusPluginLib/Group/CreateNumericalAnnotRow.cs)
## Brief description
Add or edit numerical annotation rows. This could for instance define the times of samples for time series data.
Output: Same matrix with numerical annotation row added or modified.
```{=html}
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The recommended sections are these, but they may be changed on a case by case basis.
===== Detailed description =====
===== Parameters =====
===== Theoretical background =====
===== Examples =====
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```
# Parameters
## Action
Defines the action that should be applied to a numerical annotation row (default: Create). The action can be selected from a predefined list:
- Create
- Edit
- Rename
- Delete
Each of the above listed options has different parameters, which are explained below in more detail and grouped according to the action.
### Create
#### Row name
This parameter is just relevant, if "Action" is set to "Create". It defines the name of the new generated numerical annotation row (default: Quantity1).
#### Here: Column 1 ... Column 12
This parameter is just relevant, if "Action" is set to "Create". For each of the expression columns in the matrix the numerical value of that column in the numerical annotation row can be specified (default: each expression column has an own numerical group indicated by a number).
### Edit
#### Numerical row
This parameter is just relevant, if "Action" is set to "Edit". It specifies the selected numerical row that should be edited (default: first numerical column in the matrix).
#### Here: Column 1...Column 12
This parameter is just relevant, if "Action" is set to "Edit". For each of the expression columns in the matrix the value in the numerical row can be edited by typing into the defined text field after the column name (default: numerical value of each expression column in that row).
### Rename
#### Numerical row
This parameter is just relevant, if "Action" is set to "Rename". It specifies the selected numerical row that should be renamed (default: first numerical row in the matrix).
#### New name
This parameter is just relevant, if "Action" is set to "Rename". It defines the new name of the numerical row (default: empty).
#### New description
This parameter is just relevant, if "Action" is set to "Rename". It defines the new description of the numerical row (default: empty).
### Delete
#### Numerical row
This parameter is just relevant, if "Action" is set to "Delete". It specifies the selected categorical row that should be deleted (default: first category row in the matrix).
# Parameter window
