/
environment.yml
297 lines (296 loc) · 9.46 KB
/
environment.yml
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name: /gpfs/ysm/project/yaesoubi/mwr8/conda_envs/covidcast
channels:
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_llvm
- _r-mutex=1.0.1=anacondar_1
- attrs=19.3.0=py_0
- backcall=0.1.0=py_0
- binutils_impl_linux-64=2.34=h53a641e_0
- binutils_linux-64=2.34=hc952b39_19
- bleach=3.1.5=pyh9f0ad1d_0
- bwidget=1.9.14=0
- bzip2=1.0.8=h516909a_2
- ca-certificates=2020.4.5.1=hecc5488_0
- cairo=1.16.0=hcf35c78_1003
- certifi=2020.4.5.1=py38h32f6830_0
- curl=7.69.1=h33f0ec9_0
- decorator=4.4.2=py_0
- defusedxml=0.6.0=py_0
- entrypoints=0.3=py38h32f6830_1001
- fontconfig=2.13.1=h86ecdb6_1001
- freetype=2.10.2=he06d7ca_0
- fribidi=1.0.9=h516909a_0
- gcc_impl_linux-64=7.5.0=hd420e75_6
- gcc_linux-64=7.5.0=h09487f9_19
- gettext=0.19.8.1=hc5be6a0_1002
- gfortran_impl_linux-64=7.5.0=hdf63c60_6
- gfortran_linux-64=7.5.0=h09487f9_19
- glib=2.64.2=h6f030ca_0
- graphite2=1.3.13=he1b5a44_1001
- gsl=2.6=h294904e_0
- gxx_impl_linux-64=7.5.0=hdf63c60_6
- gxx_linux-64=7.5.0=h09487f9_19
- harfbuzz=2.4.0=h9f30f68_3
- icu=64.2=he1b5a44_1
- importlib-metadata=1.6.0=py38h32f6830_0
- importlib_metadata=1.6.0=0
- ipykernel=5.2.1=py38h23f93f0_0
- ipython=7.14.0=py38h32f6830_0
- ipython_genutils=0.2.0=py_1
- jedi=0.17.0=py38h32f6830_0
- jinja2=2.11.2=pyh9f0ad1d_0
- jpeg=9c=h14c3975_1001
- jsonschema=3.2.0=py38h32f6830_1
- jupyter_client=6.1.3=py_0
- jupyter_core=4.6.3=py38h32f6830_1
- krb5=1.17.1=h2fd8d38_0
- ld_impl_linux-64=2.34=h53a641e_0
- libblas=3.8.0=16_openblas
- libcblas=3.8.0=16_openblas
- libcurl=7.69.1=hf7181ac_0
- libedit=3.1.20170329=hf8c457e_1001
- libffi=3.2.1=he1b5a44_1007
- libgcc-ng=9.2.0=h24d8f2e_2
- libgfortran-ng=7.5.0=hdf63c60_6
- libgomp=9.2.0=h24d8f2e_2
- libiconv=1.15=h516909a_1006
- liblapack=3.8.0=16_openblas
- libopenblas=0.3.9=h5ec1e0e_0
- libpng=1.6.37=hed695b0_1
- libsodium=1.0.17=h516909a_0
- libssh2=1.8.2=h22169c7_2
- libstdcxx-ng=9.2.0=hdf63c60_2
- libtiff=4.1.0=hc7e4089_6
- libuuid=2.32.1=h14c3975_1000
- libwebp-base=1.1.0=h516909a_3
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.10=hee79883_0
- llvm-openmp=10.0.0=hc9558a2_0
- lz4-c=1.9.2=he1b5a44_1
- make=4.3=h516909a_0
- markupsafe=1.1.1=py38h1e0a361_1
- mistune=0.8.4=py38h1e0a361_1001
- mpi=1.0=openmpi
- nbconvert=5.6.1=py38h32f6830_1
- nbformat=5.0.6=py_0
- ncurses=6.1=hf484d3e_1002
- notebook=6.0.3=py38h32f6830_0
- openmpi=4.0.3=hdf1f1ad_1
- openssl=1.1.1g=h516909a_0
- packaging=20.1=py_0
- pandoc=2.9.2.1=0
- pandocfilters=1.4.2=py_1
- pango=1.42.4=h7062337_4
- parso=0.7.0=pyh9f0ad1d_0
- pcre=8.44=he1b5a44_0
- pcre2=10.34=h2f06484_0
- pexpect=4.8.0=py38h32f6830_1
- pickleshare=0.7.5=py38h32f6830_1001
- pip=20.1=pyh9f0ad1d_0
- pixman=0.38.0=h516909a_1003
- prometheus_client=0.7.1=py_0
- prompt-toolkit=3.0.5=py_0
- pthread-stubs=0.4=h14c3975_1001
- ptyprocess=0.6.0=py_1001
- pygments=2.6.1=py_0
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyrsistent=0.16.0=py38h1e0a361_0
- python=3.8.2=he5300dc_7_cpython
- python-dateutil=2.8.1=py_0
- python_abi=3.8=1_cp38
- pyzmq=19.0.1=py38ha71036d_0
- r-askpass=1.1=r40hcdcec82_2
- r-assertthat=0.2.1=r40h6115d3f_2
- r-backports=1.1.7=r40hcdcec82_0
- r-base=4.0.0=hdca8982_3
- r-base64enc=0.1_3=r40hcdcec82_1004
- r-bh=1.72.0_3=r40h6115d3f_1
- r-boot=1.3_25=r40h6115d3f_1
- r-broom=0.5.6=r40h6115d3f_1
- r-callr=3.4.3=r40h6115d3f_1
- r-caret=6.0_86=r40hcdcec82_2
- r-cellranger=1.1.0=r40h6115d3f_1003
- r-checkmate=2.0.0=r40hcdcec82_1
- r-class=7.3_17=r40hcdcec82_1
- r-cli=2.0.2=r40h6115d3f_1
- r-clipr=0.7.0=r40h6115d3f_1
- r-cluster=2.1.0=r40h9bbef5b_3
- r-codetools=0.2_16=r40h6115d3f_1002
- r-colorspace=1.4_1=r40hcdcec82_2
- r-crayon=1.3.4=r40h6115d3f_1003
- r-curl=4.3=r40hcdcec82_1
- r-data.table=1.12.8=r40hcdcec82_1
- r-dbi=1.1.0=r40h6115d3f_1
- r-dbplyr=1.4.3=r40h6115d3f_1
- r-desc=1.2.0=r40h6115d3f_1003
- r-digest=0.6.25=r40h0357c0b_2
- r-domc=1.3.6=r40_1
- r-dplyr=0.8.5=r40h0357c0b_1
- r-ellipsis=0.3.0=r40hcdcec82_1
- r-essentials=4.0=r40_2002
- r-evaluate=0.14=r40h6115d3f_2
- r-fansi=0.4.1=r40hcdcec82_1
- r-farver=2.0.3=r40h0357c0b_1
- r-fastmap=1.0.1=r40h0357c0b_1
- r-forcats=0.5.0=r40h6115d3f_1
- r-foreach=1.5.0=r40h6115d3f_1
- r-foreign=0.8_79=r40hcdcec82_0
- r-formatr=1.7=r40h6115d3f_2
- r-fs=1.4.1=r40h0357c0b_1
- r-generics=0.0.2=r40h6115d3f_1003
- r-ggplot2=3.3.0=r40h6115d3f_1
- r-gistr=0.5.0=r40h6115d3f_1
- r-glmnet=4.0=r40h9bbef5b_0
- r-glue=1.4.1=r40hcdcec82_0
- r-gower=0.2.1=r40hcdcec82_2
- r-gridextra=2.3=r40h6115d3f_1003
- r-gtable=0.3.0=r40h6115d3f_3
- r-haven=2.2.0=r40hde08347_1
- r-hexbin=1.28.1=r40h9bbef5b_1
- r-highr=0.8=r40h6115d3f_2
- r-hms=0.5.3=r40h6115d3f_1
- r-htmltools=0.4.0=r40h0357c0b_1
- r-htmlwidgets=1.5.1=r40h6115d3f_1
- r-httpuv=1.5.2=r40h0357c0b_2
- r-httr=1.4.1=r40h6115d3f_2
- r-inline=0.3.15=r40h6115d3f_1002
- r-ipred=0.9_9=r40hcdcec82_2
- r-irdisplay=0.7=r40_1002
- r-irkernel=1.1=r40h6115d3f_1
- r-isoband=0.2.1=r40h0357c0b_1
- r-iterators=1.0.12=r40h6115d3f_1
- r-jsonlite=1.6.1=r40hcdcec82_1
- r-kernsmooth=2.23_17=r40hfa343cc_1
- r-knitr=1.28=r40h6115d3f_1
- r-labeling=0.3=r40h6115d3f_1003
- r-later=1.0.0=r40h0357c0b_1
- r-lattice=0.20_41=r40hcdcec82_2
- r-lava=1.6.7=r40h6115d3f_1
- r-lazyeval=0.2.2=r40hcdcec82_2
- r-lifecycle=0.2.0=r40h6115d3f_1
- r-loo=2.2.0=r40h6115d3f_1
- r-lubridate=1.7.8=r40h0357c0b_1
- r-magrittr=1.5=r40h6115d3f_1003
- r-maps=3.3.0=r40hcdcec82_1004
- r-markdown=1.1=r40hcdcec82_1
- r-mass=7.3_51.6=r40hcdcec82_2
- r-matrix=1.2_18=r40h7fa42b6_3
- r-matrixstats=0.56.0=r40hcdcec82_1
- r-mgcv=1.8_31=r40h7fa42b6_1
- r-mime=0.9=r40hcdcec82_1
- r-modelmetrics=1.2.2.2=r40h0357c0b_1
- r-modelr=0.1.7=r40h6115d3f_1
- r-munsell=0.5.0=r40h6115d3f_1003
- r-nlme=3.1_147=r40h9bbef5b_1
- r-nnet=7.3_14=r40hcdcec82_1
- r-numderiv=2016.8_1.1=r40h6115d3f_2
- r-openssl=1.4.1=r40he5c4762_1
- r-pbdzmq=0.3_3=r40h559a7a4_1003
- r-pillar=1.4.4=r40h6115d3f_0
- r-pkgbuild=1.0.8=r40h6115d3f_0
- r-pkgconfig=2.0.3=r40h6115d3f_1
- r-pkgload=1.0.2=r40h0357c0b_1002
- r-plogr=0.2.0=r40h6115d3f_1003
- r-plyr=1.8.6=r40h0357c0b_1
- r-praise=1.0.0=r40h6115d3f_1004
- r-prettyunits=1.1.1=r40h6115d3f_1
- r-proc=1.16.2=r40h0357c0b_1
- r-processx=3.4.2=r40hcdcec82_1
- r-prodlim=2019.11.13=r40h0357c0b_1
- r-progress=1.2.2=r40h6115d3f_2
- r-promises=1.1.0=r40h0357c0b_1
- r-pryr=0.1.4=r40h0357c0b_1004
- r-ps=1.3.3=r40hcdcec82_0
- r-purrr=0.3.4=r40hcdcec82_1
- r-quantmod=0.4.17=r40h6115d3f_1
- r-r6=2.4.1=r40h6115d3f_1
- r-randomforest=4.6_14=r40h9bbef5b_1003
- r-rbokeh=0.5.0=r40h6115d3f_1003
- r-rcolorbrewer=1.1_2=r40h6115d3f_1003
- r-rcpp=1.0.4.6=r40h0357c0b_1
- r-rcppeigen=0.3.3.7.0=r40h51c796c_2
- r-readr=1.3.1=r40h0357c0b_1004
- r-readxl=1.3.1=r40hde08347_4
- r-recipes=0.1.12=r40h6115d3f_1
- r-recommended=4.0=r40_1004
- r-rematch=1.0.1=r40h6115d3f_1003
- r-repr=1.1.0=r40h6115d3f_1
- r-reprex=0.3.0=r40h6115d3f_2
- r-reshape2=1.4.4=r40h0357c0b_1
- r-rlang=0.4.6=r40hcdcec82_0
- r-rmarkdown=2.1=r40h6115d3f_1
- r-rmpi=0.6_9=r40hb6d74f4_1002
- r-rpart=4.1_15=r40hcdcec82_2
- r-rprojroot=1.3_2=r40h6115d3f_1003
- r-rstan=2.19.3=r40h0357c0b_1
- r-rstantools=2.0.0=r40h0357c0b_2
- r-rstudioapi=0.11=r40h6115d3f_1
- r-rvest=0.3.5=r40h6115d3f_1
- r-scales=1.1.1=r40h6115d3f_0
- r-selectr=0.4_2=r40h6115d3f_1
- r-shape=1.4.4=r40_1003
- r-shiny=1.4.0.2=r40h6115d3f_1
- r-sourcetools=0.1.7=r40he1b5a44_1002
- r-spatial=7.3_12=r40hcdcec82_1
- r-squarem=2020.2=r40h6115d3f_1
- r-stanheaders=2.21.0_1=r40h6786f55_1
- r-stringi=1.4.6=r40h0e574ca_2
- r-stringr=1.4.0=r40h6115d3f_2
- r-survival=3.1_12=r40hcdcec82_1
- r-sys=3.3=r40hcdcec82_1
- r-testthat=2.3.2=r40h0357c0b_1
- r-tibble=3.0.1=r40hcdcec82_1
- r-tidyr=1.0.3=r40h0357c0b_0
- r-tidyselect=1.1.0=r40h6115d3f_0
- r-tidyverse=1.3.0=r40h6115d3f_2
- r-timedate=3043.102=r40h6115d3f_1002
- r-tinytex=0.22=r40h6115d3f_1
- r-ttr=0.23_6=r40hcdcec82_1
- r-utf8=1.1.4=r40hcdcec82_1003
- r-uuid=0.1_4=r40hcdcec82_1
- r-vctrs=0.3.0=r40hcdcec82_0
- r-viridislite=0.3.0=r40h6115d3f_1003
- r-whisker=0.4=r40h6115d3f_1
- r-withr=2.2.0=r40h6115d3f_1
- r-xfun=0.13=r40h6115d3f_1
- r-xml2=1.3.2=r40h0357c0b_1
- r-xtable=1.8_4=r40h6115d3f_3
- r-xts=0.12_0=r40hcdcec82_1
- r-yaml=2.2.1=r40hcdcec82_1
- r-zeallot=0.1.0=r40h6115d3f_1002
- r-zoo=1.8_8=r40hcdcec82_0
- readline=8.0=hf8c457e_0
- sed=4.7=h1bed415_1000
- send2trash=1.5.0=py_0
- setuptools=46.3.0=py38h32f6830_0
- six=1.14.0=py_1
- sqlite=3.30.1=hcee41ef_0
- terminado=0.8.3=py38h32f6830_1
- testpath=0.4.4=py_0
- tk=8.6.10=hed695b0_0
- tktable=2.10=h555a92e_3
- tornado=6.0.4=py38h1e0a361_1
- traitlets=4.3.3=py38h32f6830_1
- wcwidth=0.1.9=pyh9f0ad1d_0
- webencodings=0.5.1=py_1
- wheel=0.34.2=py_1
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.9=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.5=h516909a_0
- zeromq=4.3.2=he1b5a44_2
- zipp=3.1.0=py_0
- zlib=1.2.11=h516909a_1006
- zstd=1.4.4=h6597ccf_3
prefix: /gpfs/ysm/project/yaesoubi/mwr8/conda_envs/covidcast