{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":176762503,"defaultBranch":"devel","name":"structToolbox","ownerLogin":"computational-metabolomics","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2019-03-20T15:23:44.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/20993922?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1697211249.0","currentOid":""},"activityList":{"items":[{"before":"ec2cca9ef8eafafb3b4df3256e7f3c221bded608","after":"d8dbd91aa49bcdef84fa6b9c24de139d2ab47881","ref":"refs/heads/gh-pages","pushedAt":"2024-02-02T11:22:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ computational-metabolomics/structToolbox@55546c0b0465430f704d5603d1f6f0cd8be10261 ๐Ÿš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 55546c0 ๐Ÿš€"}},{"before":"5ce3145077a228cf1545274bd7a78fba67a8a8ec","after":"55546c0b0465430f704d5603d1f6f0cd8be10261","ref":"refs/heads/devel","pushedAt":"2024-02-02T10:49:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"rebuild documentation\n\n- due to changes in struct (removal of unicode)","shortMessageHtmlLink":"rebuild documentation"}},{"before":"b12488d29ccf5fa46410cbea0e8d9149350d529e","after":"ec2cca9ef8eafafb3b4df3256e7f3c221bded608","ref":"refs/heads/gh-pages","pushedAt":"2024-01-31T11:41:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ computational-metabolomics/structToolbox@5ce3145077a228cf1545274bd7a78fba67a8a8ec ๐Ÿš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 5ce3145 ๐Ÿš€"}},{"before":"7bbee59f1212878566ec441621ea1563ca381a11","after":"b12488d29ccf5fa46410cbea0e8d9149350d529e","ref":"refs/heads/gh-pages","pushedAt":"2024-01-31T10:59:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ computational-metabolomics/structToolbox@5ce3145077a228cf1545274bd7a78fba67a8a8ec ๐Ÿš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 5ce3145 ๐Ÿš€"}},{"before":"ba67e1f16a0c812e62861a6edf65681326bec1f4","after":"5ce3145077a228cf1545274bd7a78fba67a8a8ec","ref":"refs/heads/devel","pushedAt":"2024-01-31T10:49:06.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"update actions","shortMessageHtmlLink":"update actions"}},{"before":"e8d5e7969c7af8f1817c5d32a98a7b04b473f516","after":"7bbee59f1212878566ec441621ea1563ca381a11","ref":"refs/heads/gh-pages","pushedAt":"2024-01-31T10:07:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ computational-metabolomics/structToolbox@ba67e1f16a0c812e62861a6edf65681326bec1f4 ๐Ÿš€","shortMessageHtmlLink":"Deploying to gh-pages from @ ba67e1f ๐Ÿš€"}},{"before":"ad6e0fbf54b6bc5ba0d8c9af726f9802537710c0","after":"ba67e1f16a0c812e62861a6edf65681326bec1f4","ref":"refs/heads/devel","pushedAt":"2024-01-31T09:50:51.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"version bump for bioc build","shortMessageHtmlLink":"version bump for bioc build"}},{"before":"c606397d7580e09479c56b8820961c725e68c140","after":"e8d5e7969c7af8f1817c5d32a98a7b04b473f516","ref":"refs/heads/gh-pages","pushedAt":"2023-10-13T20:22:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ computational-metabolomics/structToolbox@ad6e0fbf54b6bc5ba0d8c9af726f9802537710c0 ๐Ÿš€","shortMessageHtmlLink":"Deploying to gh-pages from @ ad6e0fb ๐Ÿš€"}},{"before":"b8ece2186a958957b1fc037a942083b1e54d4541","after":"ad6e0fbf54b6bc5ba0d8c9af726f9802537710c0","ref":"refs/heads/devel","pushedAt":"2023-10-13T20:00:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"update webpages","shortMessageHtmlLink":"update webpages"}},{"before":"2ab5198fb658433d2e67b7b947c8aed28bb0499b","after":"c606397d7580e09479c56b8820961c725e68c140","ref":"refs/heads/gh-pages","pushedAt":"2023-10-13T15:34:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"Remove temp file","shortMessageHtmlLink":"Remove temp file"}},{"before":null,"after":"2ab5198fb658433d2e67b7b947c8aed28bb0499b","ref":"refs/heads/gh-pages","pushedAt":"2023-10-13T15:34:09.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"Init orphan branch","shortMessageHtmlLink":"Init orphan branch"}},{"before":"4c94414e5886d1762ea714776a2662e12031c49a","after":"b8ece2186a958957b1fc037a942083b1e54d4541","ref":"refs/heads/devel","pushedAt":"2023-10-05T10:25:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"improve fold change computations\n\n- simplify computation of flags when applying fc threshold for consistency across methods\n- better handling of NA when computing intervals for median and mean methods","shortMessageHtmlLink":"improve fold change computations"}},{"before":"8662767d2f29296acaa4d0a1ae86ef55f3797ec8","after":"9b1b307fb85d2cbe88730832ff976b108ba82ee0","ref":"refs/heads/RELEASE_3_17","pushedAt":"2023-09-05T15:27:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"hotfix PLSDA predictions\n\n- predictions now correctly assigned based on max probability or max yhat\n- tests updated\n- documentation updated\n- news updated\n- version bump","shortMessageHtmlLink":"hotfix PLSDA predictions"}},{"before":"710dd2a7910479c3d395eb84a9060556f4b7c503","after":"4c94414e5886d1762ea714776a2662e12031c49a","ref":"refs/heads/devel","pushedAt":"2023-09-05T15:08:47.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"version bump","shortMessageHtmlLink":"version bump"}},{"before":"e29c84985fde2f469199fbfe64d4d79f7d04be8f","after":"710dd2a7910479c3d395eb84a9060556f4b7c503","ref":"refs/heads/devel","pushedAt":"2023-09-05T15:02:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"update documentation","shortMessageHtmlLink":"update documentation"}},{"before":"611668f7115e9cf5d74ad43ae29e625912480d0a","after":"e29c84985fde2f469199fbfe64d4d79f7d04be8f","ref":"refs/heads/devel","pushedAt":"2023-07-20T10:57:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"version bump and news update","shortMessageHtmlLink":"version bump and news update"}},{"before":"1c3b93a12e3e0563ea8552ef5f120afffeb06c1b","after":"8662767d2f29296acaa4d0a1ae86ef55f3797ec8","ref":"refs/heads/RELEASE_3_17","pushedAt":"2023-07-20T10:57:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"version bump and news update","shortMessageHtmlLink":"version bump and news update"}},{"before":"000b515e98264489706cc4544ccb5ec521c15d01","after":"1c3b93a12e3e0563ea8552ef5f120afffeb06c1b","ref":"refs/heads/RELEASE_3_17","pushedAt":"2023-07-20T09:57:53.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"update d-ratio tests","shortMessageHtmlLink":"update d-ratio tests"}},{"before":"ec7d0158d83738ec52e8981953a8d98659d0c7fe","after":"611668f7115e9cf5d74ad43ae29e625912480d0a","ref":"refs/heads/devel","pushedAt":"2023-07-20T09:56:39.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"fix dratio\n\n- update equation(s) to match paper\n- add option to use sd or mad\n- add second version of dratio from paper\n- add tests","shortMessageHtmlLink":"fix dratio"}},{"before":"9ec6ff541886fd24ee935eb8e659bcb3084e8e79","after":"000b515e98264489706cc4544ccb5ec521c15d01","ref":"refs/heads/RELEASE_3_17","pushedAt":"2023-07-10T13:35:43.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"version bump and news","shortMessageHtmlLink":"version bump and news"}},{"before":"81ee428bba67b4868feff64fb7cd523c4f6f2bd9","after":"ec7d0158d83738ec52e8981953a8d98659d0c7fe","ref":"refs/heads/devel","pushedAt":"2023-07-10T13:04:09.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"version bump and news","shortMessageHtmlLink":"version bump and news"}},{"before":"d0d045eb7ab0b7400c3d53cc20e5f5f0eeb3ec5d","after":"81ee428bba67b4868feff64fb7cd523c4f6f2bd9","ref":"refs/heads/devel","pushedAt":"2023-07-06T19:55:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"version bump and news update","shortMessageHtmlLink":"version bump and news update"}},{"before":"32654e9651458b59d3a7469b176bf783fdfe9aea","after":"d0d045eb7ab0b7400c3d53cc20e5f5f0eeb3ec5d","ref":"refs/heads/devel","pushedAt":"2023-07-06T17:19:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"fix documentation\n\n- remove use of square brackets as this now gets interpreted as markdown\n- generate filter_by_name documentation from object, like we do for all other objects","shortMessageHtmlLink":"fix documentation"}},{"before":"ffecce881ce29be79520702407db6a0ed04d7b09","after":"32654e9651458b59d3a7469b176bf783fdfe9aea","ref":"refs/heads/devel","pushedAt":"2023-07-06T15:19:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"fix documentation\n\ndue to roxygen no longer needing % to be escaped.\n- add markdown flag to description file\n- use text format for citations (includes markdown)\n- remove % from descriptions (doesnt work with current implementation)","shortMessageHtmlLink":"fix documentation"}},{"before":"7152b7c1daf9483c334374c02166f92b57453a29","after":"ffecce881ce29be79520702407db6a0ed04d7b09","ref":"refs/heads/devel","pushedAt":"2023-07-06T13:17:23.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'upstream/devel' into devel","shortMessageHtmlLink":"Merge remote-tracking branch 'upstream/devel' into devel"}},{"before":null,"after":"9ec6ff541886fd24ee935eb8e659bcb3084e8e79","ref":"refs/heads/RELEASE_3_17","pushedAt":"2023-06-26T14:03:05.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"bump x.y.z version to even y prior to creation of RELEASE_3_17 branch","shortMessageHtmlLink":"bump x.y.z version to even y prior to creation of RELEASE_3_17 branch"}},{"before":"7152b7c1daf9483c334374c02166f92b57453a29","after":null,"ref":"refs/heads/master","pushedAt":"2023-04-17T14:54:09.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"}},{"before":null,"after":"7152b7c1daf9483c334374c02166f92b57453a29","ref":"refs/heads/devel","pushedAt":"2023-04-17T14:54:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"grlloyd","name":"Gavin Rhys Lloyd","path":"/grlloyd","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12222440?s=80&v=4"},"commit":{"message":"update documentation","shortMessageHtmlLink":"update documentation"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAD8B8XuQA","startCursor":null,"endCursor":null}},"title":"Activity ยท computational-metabolomics/structToolbox"}