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which version of android are you running against. I think we built ours against jellybean. If you have a pull request modification we'll accept it if it doesn't break backward changes.
I had the same issue compiling with the latest ndk version (r10c). I changed for r10 ndk version and everything works. So its a problem using the latest ndk.
Tried building on my box today, got (fatal) implicit declaration of posix_memalign at line 95 of libavutil/mem.c.
Checked config.h, HAVE_POSIX_MEMALIGN == 1, however Android doesn't. Undef'ing it fixed the issue.
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