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DESCRIPTION
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DESCRIPTION
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Package: DEGage
Type: Package
Title: DEGage
Version: 1.0.0
Author: Alicia Petrany, Yong Chen
Maintainer: <petran54@students.rowan.edu>
Description: Can detect pairwise differential expression with DEGage(), or differential expression across groups with DEGage_multitest(). Count Prefiltering and celltype annotations can be generated with DEGage_preprocess, and a the full processing and multi-test workflow is available with DEGage_complete(). Finally, DEGage_simulate() can be used to generate very simple simulation data with different proportions of dropouts.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Imports:
Rcpp (>= 1.0.9),
MASS,
hypergeo,
pscl,
parallel,
doParallel,
SingleR,
Seurat,
SingleCellExperiment,
celldex,
foreach
LinkingTo: Rcpp
RoxygenNote: 7.2.3
Suggests:
knitr,
rmarkdown,
VignetteBuilder: knitr