{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":98427373,"defaultBranch":"master","name":"carveme","ownerLogin":"cdanielmachado","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2017-07-26T13:43:30.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/2588245?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1709293067.0","currentOid":""},"activityList":{"items":[{"before":"ac4a6fd67702f518a660cd520be8b2112d7c7442","after":"32abfbb4571c63d1fae0ce4e599210e00cc3c580","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T15:23:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Delete pushing_test.txt","shortMessageHtmlLink":"Delete pushing_test.txt"}},{"before":"97fd815ccff29f433cf8ddfb492c176deacfe67e","after":"ac4a6fd67702f518a660cd520be8b2112d7c7442","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T15:22:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"This is a test","shortMessageHtmlLink":"This is a test"}},{"before":"ed3c1a88de53685c42f4d996812c6af61ddcc669","after":"97fd815ccff29f433cf8ddfb492c176deacfe67e","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:37:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Added extended and refined bacterial model\n\nThis includes proteins from R. cellulolyticum H10 and Clostridia BL-3 and BL-4.","shortMessageHtmlLink":"Added extended and refined bacterial model"}},{"before":"2d92ebcfd6fdc59eaf884edd2b6e4ce81802b4ca","after":"ed3c1a88de53685c42f4d996812c6af61ddcc669","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:36:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Delete carveme/data/generated/universe_bacteria.xml.gz\n\nDelete before replacing with new model","shortMessageHtmlLink":"Delete carveme/data/generated/universe_bacteria.xml.gz"}},{"before":"cd851100f780b2d93dcaff27bcefbf1365ac7e04","after":"2d92ebcfd6fdc59eaf884edd2b6e4ce81802b4ca","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:35:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Added extended and refined model_specific_data.csv\n\nThis includes proteins from R. cellulolyticum H10 and Clostridia BL-3 and BL-4.","shortMessageHtmlLink":"Added extended and refined model_specific_data.csv"}},{"before":"bdd9c554cc58cce1b8e9d4c0bee3ce5a3a88d214","after":"cd851100f780b2d93dcaff27bcefbf1365ac7e04","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:34:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Delete carveme/data/generated/model_specific_data.csv.gz\n\nDelete before replacing with new file","shortMessageHtmlLink":"Delete carveme/data/generated/model_specific_data.csv.gz"}},{"before":"2199a5888647d4880bf0d7b60eb6d148a1e27696","after":"bdd9c554cc58cce1b8e9d4c0bee3ce5a3a88d214","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:34:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Added extended and refined gene_annotations.tsv\n\nThis includes proteins from R. cellulolyticum H10 and Clostridia BL-3 and BL-4.","shortMessageHtmlLink":"Added extended and refined gene_annotations.tsv"}},{"before":"f6f4f8e35236ceac437e32bc71a1602fcc461cc6","after":"2199a5888647d4880bf0d7b60eb6d148a1e27696","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:33:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Delete carveme/data/generated/gene_annotations.tsv.gz\n\nDelete before replacing with new file","shortMessageHtmlLink":"Delete carveme/data/generated/gene_annotations.tsv.gz"}},{"before":"296662bf3641087bc9f3d5e352968c5569eb4150","after":"f6f4f8e35236ceac437e32bc71a1602fcc461cc6","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:32:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Extended and refined bigg_gprs.csv\n\nThis includes proteins from R. cellulolyticum H10 and Clostridia BL-3 and BL-4.","shortMessageHtmlLink":"Extended and refined bigg_gprs.csv"}},{"before":"b1e5cb6ac36389756ed7db19e944e1db14d9be7a","after":"296662bf3641087bc9f3d5e352968c5569eb4150","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:30:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Delete carveme/data/generated/bigg_gprs.csv.gz\n\nDelete before replacing with new file.","shortMessageHtmlLink":"Delete carveme/data/generated/bigg_gprs.csv.gz"}},{"before":"1c17dbc3fff76d1e6555a72a081e1f3924bbabe7","after":"b1e5cb6ac36389756ed7db19e944e1db14d9be7a","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:16:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Added extended bigg_proteins.faa\n\nThis includes proteins from R. cellulolyticum H10 and Clostridia BL-3 and BL-4.","shortMessageHtmlLink":"Added extended bigg_proteins.faa"}},{"before":"dfe13b61e7a9dba0dde592c9d446e8c921fca102","after":"1c17dbc3fff76d1e6555a72a081e1f3924bbabe7","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T11:14:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"Delete carveme/data/generated/bigg_proteins.faa\n\nDelete bigg_proteins.faa to replace with new file","shortMessageHtmlLink":"Delete carveme/data/generated/bigg_proteins.faa"}},{"before":null,"after":"dfe13b61e7a9dba0dde592c9d446e8c921fca102","ref":"refs/heads/universe_extension","pushedAt":"2024-03-01T10:30:41.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"IdunBurgos","name":null,"path":"/IdunBurgos","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/100085378?s=80&v=4"},"commit":{"message":"fix SCIPSolver import","shortMessageHtmlLink":"fix SCIPSolver import"}},{"before":"ebaa016e6254d1b5c2cdf8f42e3f4359f1b866e8","after":"dfe13b61e7a9dba0dde592c9d446e8c921fca102","ref":"refs/heads/master","pushedAt":"2024-01-04T09:11:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"fix SCIPSolver import","shortMessageHtmlLink":"fix SCIPSolver import"}},{"before":"bfe87bdb1005664283d482dc20ee2e91001269ab","after":"ebaa016e6254d1b5c2cdf8f42e3f4359f1b866e8","ref":"refs/heads/master","pushedAt":"2023-11-08T13:36:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"add yaml to docs","shortMessageHtmlLink":"add yaml to docs"}},{"before":"2ac5e091d6b3506cdffe02a74d5a48d1528d21a7","after":"bfe87bdb1005664283d482dc20ee2e91001269ab","ref":"refs/heads/master","pushedAt":"2023-11-08T13:10:48.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"update docs","shortMessageHtmlLink":"update docs"}},{"before":"d828270863dea9b945301da6eb83bb1827c97de4","after":"2ac5e091d6b3506cdffe02a74d5a48d1528d21a7","ref":"refs/heads/master","pushedAt":"2023-11-08T12:49:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"add support for SCIP solver","shortMessageHtmlLink":"add support for SCIP solver"}},{"before":"766291005915cc51e8eebb3bd0bfff2dcb03cdc0","after":"d828270863dea9b945301da6eb83bb1827c97de4","ref":"refs/heads/master","pushedAt":"2023-08-31T12:17:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"remove biomass from objective function","shortMessageHtmlLink":"remove biomass from objective function"}},{"before":"b7b7015f0775654e0756e4dd50f6418e374e0a3f","after":"766291005915cc51e8eebb3bd0bfff2dcb03cdc0","ref":"refs/heads/master","pushedAt":"2023-06-08T06:58:25.787Z","pushType":"push","commitsCount":1,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"fix bug with default solver selection","shortMessageHtmlLink":"fix bug with default solver selection"}},{"before":"37602ec32c7ea70f3195a9e48d6944f5a797adde","after":"b7b7015f0775654e0756e4dd50f6418e374e0a3f","ref":"refs/heads/master","pushedAt":"2023-05-22T07:36:21.454Z","pushType":"push","commitsCount":1,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"release 1.5.2","shortMessageHtmlLink":"release 1.5.2"}},{"before":"0861460e36d290029d97574498606b9549641cc3","after":"37602ec32c7ea70f3195a9e48d6944f5a797adde","ref":"refs/heads/master","pushedAt":"2023-04-28T08:02:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"set annotation score threshold at 100","shortMessageHtmlLink":"set annotation score threshold at 100"}},{"before":"30d71a55eab1a5cba7c06c0baceb7339c1f05324","after":"0861460e36d290029d97574498606b9549641cc3","ref":"refs/heads/master","pushedAt":"2023-04-27T13:45:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"round scores and apply reaction bounds","shortMessageHtmlLink":"round scores and apply reaction bounds"}},{"before":"09c2f31c4db83772e2af26969b46865fc2ee2eba","after":"30d71a55eab1a5cba7c06c0baceb7339c1f05324","ref":"refs/heads/master","pushedAt":"2023-04-25T11:08:41.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"undo","shortMessageHtmlLink":"undo"}},{"before":"e5a5649dc7b469b3208f0723e2f84fdd2a45f573","after":"09c2f31c4db83772e2af26969b46865fc2ee2eba","ref":"refs/heads/master","pushedAt":"2023-04-25T10:52:19.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"cdanielmachado","name":"Daniel Machado","path":"/cdanielmachado","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2588245?s=80&v=4"},"commit":{"message":"Merge branch 'master' of https://github.com/cdanielmachado/carveme","shortMessageHtmlLink":"Merge branch 'master' of https://github.com/cdanielmachado/carveme"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAECeTRqgA","startCursor":null,"endCursor":null}},"title":"Activity ยท cdanielmachado/carveme"}