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severe bug after updating version #4

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Atomu2014 opened this issue Apr 15, 2024 · 2 comments
Open

severe bug after updating version #4

Atomu2014 opened this issue Apr 15, 2024 · 2 comments

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@Atomu2014
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Dear authors,

I followed your work and use PoseCheck to calculate clash and strain energy since last year. Recently I pulled your update and re-calculated those numbers and found a severe mismatch between strain energy.

Previously, the 25%, 50%, 75% percentiles of the CrossDocked test set are: 36, 114, 205, quite reasonable.
However, after pulling, the numbers become: 1.08, 3.56, 6.19.

This is a BIG PROBLEM.

Can you re-check your updated code to ensure your new version can reproduce your paper results?

I think your last commint in 2023 should be the version of your paper results.

Thanks,
Yanru

@amorehead
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This seems related to what you have found: https://github.com/cch1999/posecheck/blob/main/changelog.md#11---18-01-2024

@Atomu2014
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This seems related to what you have found: https://github.com/cch1999/posecheck/blob/main/changelog.md#11---18-01-2024

So which version should I follow? The new version strain energy is quite different from PoseCheck paper results

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