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DESCRIPTION
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DESCRIPTION
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Package: leader
Title: Cell Selection Method to Generate more Balanced Datasets
Version: 0.99.0
Authors@R:
person("Michael", "Geuenich", , "m.geuenich@mail.utoronto.ca", role = c("aut", "cre"), comment = c(ORCID = "0009-0001-8211-3070"))
Description: Implementation of adaptive reweighing, a method to generate balanced datasets from single cell data. Given a dataset, it samples cells from clusters. This can be done in a marker aware fashion, where prior knowledge of cell type marker genes is used or in a cell type marker independent manner.
License: GPL-3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Imports:
dplyr,
Seurat,
splitstackshape,
tibble,
yaml
Suggests:
testthat (>= 3.0.0)
Config/testthat/edition: 3
Depends:
R (>= 2.10)
LazyData: false
biocViews: Clustering, SingleCell, Annotation
BugReports: https://github.com/camlab-bioml/leader