list index out of range error in SCDataset.get_mu_init()

[ywu202300]

To reproduce this error:

yaml file - >

cell_types:
  A:
  - marker1
  - marker2
  B:
  - marker1
  - marker3
  - maker 4

and all markers are inside of expression.csv

The "list index out of range error" coming from this line
, and "indices_to_use" is empty.

Any idea why it gives me an error? Thanks

[kieranrcampbell]

hi @ywu202300 possible to share (a subsample of) the data you're running this with so we can debug? Thanks