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Error in irlba(mat, nv = 50) : BLAS/LAPACK routine 'DLASCL' gave error code -4 #68
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Thanks for the reproducible code.
Unfortunately, I can't reproduce the error yet (it's working OK for me).
Can you report the output of the R function:
sessionInfo()
…On 6/27/23, Jan Vincent B. Beltran ***@***.***> wrote:
Hi. How can I resolve this irlba error? When nv > 40 it always fail.
Re-installing the irlba via `install_github("bwlewis/irlba", force = TRUE) `
also did not change anything.
```
library(irlba)
mat <- matrix(data = rnorm(n = 3000*2000), nrow = 3000, ncol = 2000)
test <- irlba(mat, nv = 50)
test <- irlba(mat, nv = 40)
test <- irlba(mat, nv = 30)
```
![image](https://github.com/bwlewis/irlba/assets/68268222/a0f85c3c-f18d-46f8-989c-d4f2057a76bc)
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#68
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Dear @bwlewis, Below is the result of sessionInfo(). I'm really stuck for more than a month already and it is depressing. I hope you can help me. We have already re-installed R (including r-core and r-core-base) as well as upgraded gfortran and re-installed irlba based on other's previous experiences, but all unsuccessful. :(
|
Working on a solution...
…On 6/28/23, Jan Vincent B. Beltran ***@***.***> wrote:
Dear @bwlewis,
Below is the result of sessionInfo(). I'm really stuck for more than a month
already and it is depressing. I hope you can help me. We have already
re-installed R (including r-core and r-core-base) as well as upgraded
gfortran and re-installed irlba based on other's previous experiences, but
all unsuccessful. :(
![image](https://github.com/bwlewis/irlba/assets/68268222/ef1cc65e-c4dc-4869-a500-113d73dc99f8)
```
> sessionInfo()
R version 4.3.0 (2023-04-21)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 23.04
Matrix products: default
BLAS/LAPACK: /usr/lib/x86_64-linux-gnu/libmkl_rt.so; LAPACK version 3.8.0
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
LC_MONETARY=en_US.UTF-8
[6] LC_MESSAGES=en_US.UTF-8 LC_PAPER=en_US.UTF-8 LC_NAME=C
LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
time zone: Asia/Taipei
tzcode source: system (glibc)
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] irlba_2.3.5.1 Matrix_1.5-4.1 devtools_2.4.5 usethis_2.2.1
loaded via a namespace (and not attached):
[1] miniUI_0.1.1.1 compiler_4.3.0 crayon_1.5.2 promises_1.2.0.1
Rcpp_1.0.10 stringr_1.5.0 callr_3.7.3 later_1.3.1
[9] fastmap_1.1.1 lattice_0.21-8 mime_0.12 R6_2.5.1
curl_5.0.1 htmlwidgets_1.6.2 desc_1.4.2 profvis_0.3.8
[17] rprojroot_2.0.3 shiny_1.7.4 rlang_1.1.1 cachem_1.0.8
stringi_1.7.12 httpuv_1.6.11 fs_1.6.2 pkgload_1.3.2
[25] memoise_2.0.1 cli_3.6.1 magrittr_2.0.3 ps_1.7.5
grid_4.3.0 digest_0.6.31 processx_3.8.1 rstudioapi_0.14
[33] xtable_1.8-4 remotes_2.4.2 lifecycle_1.0.3 prettyunits_1.1.1
vctrs_0.6.3 glue_1.6.2 urlchecker_1.0.1 sessioninfo_1.2.2
[41] pkgbuild_1.4.2 purrr_1.0.1 tools_4.3.0 ellipsis_0.3.2
htmltools_0.5.5
>
```
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Hi. How can I resolve this irlba error? When nv > 40 it always fail. Re-installing the irlba via
install_github("bwlewis/irlba", force = TRUE)
also did not change anything.The text was updated successfully, but these errors were encountered: