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DESCRIPTION
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DESCRIPTION
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Package: admixr
Title: An Interface for Running ADMIXTOOLS Analyses Directly from R
Version: 0.7.1
Authors@R: person("Martin", "Petr", email = "mp@bodkan.net", role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-4879-8421"))
Description: A convenient interface for performing all stages of ADMIXTOOLS
analyses entirely from R. Wrapper functions (D, f4, f3, etc.) completely
automate the generation of intermediate configuration files, run ADMIXTOOLS
programs on the command-line, and parse output files to extract values of
interest. This allows users to focus on the analysis itself instead of
worrying about low-level technical details. A set of complementary
functions for processing and filtering of data in the EIGENSTRAT format is
also provided.
License: MIT + file LICENSE
URL: https://github.com/bodkan/admixr
BugReports: https://github.com/bodkan/admixr/issues
Depends:
R (>= 3.4.0)
Imports:
dplyr,
magrittr,
readr,
stringr,
tibble,
tidyr,
stats,
rlang,
utils
Suggests:
covr,
testthat,
knitr,
rmarkdown,
tidyverse
Encoding: UTF-8
RoxygenNote: 6.1.0
VignetteBuilder: knitr