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Gene.md

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BioLinkApi.Gene

Properties

Name Type Description Notes
chromosome Chromosome chromosome on which this gene is located. This may be redundant with information in sequence_feature objects but is included here for convenience [optional]
description String full text description [optional]
diseaseAssociations [Association] diseases associated with alterations of gene [optional]
families [NamedObject] Families, superfamilies etc to which these gene belongs [optional]
fullName String full name, e.g. Synaptosome Associated Protein 29 [optional]
functionAssociations [Association] GO assocations for wild type gene [optional]
genotypeAssociations [Association] associations to genotypes in which this gene is altered [optional]
homologyAssociations [Association] orthology and paralogy assocations for this gene [optional]
interactionAssociations [Association] associations to genes that interact (may be physical or genetic) [optional]
literatureAssociations [Association] publications for this gene [optional]
pathwayAssociations [Association] Assocations to pathways in which this gene is involved, including LEGO models [optional]
phenotypeAssociations [Association] phenotypes associated with alterations of gene [optional]
sequenceFeatures [SequenceFeature] Sequence feature representing particular instance on a genome [optional]
summaries [SummaryPropertyValue] Attributed textual summaries [optional]
systematicName String E.g. SPBC428.08c for clr4 in PomBase [optional]
transcripts [Transcript] All transcripts belonging to this gene [optional]