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docker-compose.yml
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docker-compose.yml
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version: "3.5"
services:
## Build postgres docker image
db:
image: ${DOCKER_PROJECT_NAME}-db-${DOCKER_NAMESPACE}-img
container_name: ${DOCKER_PROJECT_NAME}-db-${DOCKER_NAMESPACE}-container
build:
context: ./database/.docker/db
dockerfile: Dockerfile
args:
- POSTGRES_VERSION=${POSTGRES_VERSION}
- POSTGIS_VERSION=${POSTGIS_VERSION}
- TZ=${DB_TZ}
ports:
- ${DB_PORT}:5432
healthcheck:
test: ["CMD-SHELL", "pg_isready -U $DB_ADMIN -p 5432 -d $DB_DATABASE"]
interval: 5s
timeout: 5s
retries: 30
environment:
- NODE_ENV=${NODE_ENV}
- POSTGRES_USER=${DB_ADMIN}
- POSTGRES_PASSWORD=${DB_ADMIN_PASS}
- POSTGRES_DB=${DB_DATABASE}
- PORT=5432
networks:
- biohubbc-network
volumes:
- postgres:/var/lib/postgresql/data
## Build the api docker image
api:
image: ${DOCKER_PROJECT_NAME}-api-${DOCKER_NAMESPACE}-img
container_name: ${DOCKER_PROJECT_NAME}-api-${DOCKER_NAMESPACE}-container
build:
context: ./api
dockerfile: ./.docker/api/Dockerfile
ports:
- ${API_PORT}:${API_PORT}
environment:
- NODE_ENV=${NODE_ENV}
- NODE_OPTIONS=${API_NODE_OPTIONS}
# ITIS API
- ITIS_SOLR_URL=${ITIS_SOLR_URL}
- S3_KEY_PREFIX=${S3_KEY_PREFIX}
- TZ=${API_TZ}
- API_HOST=${API_HOST}
- API_PORT=${API_PORT}
- DB_HOST=${DB_HOST}
- DB_USER_API=${DB_USER_API}
- DB_USER_API_PASS=${DB_USER_API_PASS}
- DB_PORT=5432
- DB_DATABASE=${DB_DATABASE}
- DB_SCHEMA=${DB_SCHEMA}
- DB_POOL_SIZE=${DB_POOL_SIZE}
- DB_CONNECTION_MAX_USES=${DB_CONNECTION_MAX_USES}
- DB_CONNECTION_TIMEOUT=${DB_CONNECTION_TIMEOUT}
- DB_IDLE_TIMEOUT=${DB_IDLE_TIMEOUT}
# Keycloak
- KEYCLOAK_HOST=${KEYCLOAK_HOST}
- KEYCLOAK_REALM=${KEYCLOAK_REALM}
# Keycloak Service client
- KEYCLOAK_ADMIN_USERNAME=${KEYCLOAK_ADMIN_USERNAME}
- KEYCLOAK_ADMIN_PASSWORD=${KEYCLOAK_ADMIN_PASSWORD}
# Keycloak CSS API
- KEYCLOAK_API_TOKEN_URL=${KEYCLOAK_API_TOKEN_URL}
- KEYCLOAK_API_CLIENT_ID=${KEYCLOAK_API_CLIENT_ID}
- KEYCLOAK_API_CLIENT_SECRET=${KEYCLOAK_API_CLIENT_SECRET}
- KEYCLOAK_API_HOST=${KEYCLOAK_API_HOST}
- KEYCLOAK_API_ENVIRONMENT=${KEYCLOAK_API_ENVIRONMENT}
# Object Store (S3)
- OBJECT_STORE_URL=${OBJECT_STORE_URL}
- OBJECT_STORE_ACCESS_KEY_ID=${OBJECT_STORE_ACCESS_KEY_ID}
- OBJECT_STORE_SECRET_KEY_ID=${OBJECT_STORE_SECRET_KEY_ID}
- OBJECT_STORE_BUCKET_NAME=${OBJECT_STORE_BUCKET_NAME}
- MAX_REQ_BODY_SIZE=${MAX_REQ_BODY_SIZE}
- MAX_UPLOAD_NUM_FILES=${MAX_UPLOAD_NUM_FILES}
- MAX_UPLOAD_FILE_SIZE=${MAX_UPLOAD_FILE_SIZE}
- LOG_LEVEL=${LOG_LEVEL}
- CLAMAV_PORT=${CLAMAV_PORT}
- CLAMAV_HOST=${CLAMAV_HOST}
- ENABLE_FILE_VIRUS_SCAN=${ENABLE_FILE_VIRUS_SCAN}
- GCNOTIFY_SECRET_API_KEY=${GCNOTIFY_SECRET_API_KEY}
- GCNOTIFY_ADMIN_EMAIL=${GCNOTIFY_ADMIN_EMAIL}
- GCNOTIFY_REQUEST_ACCESS_SECURE_DOCUMENTS=${GCNOTIFY_REQUEST_ACCESS_SECURE_DOCUMENTS}
- GCNOTIFY_ONBOARDING_REQUEST_EMAIL_TEMPLATE=${GCNOTIFY_ONBOARDING_REQUEST_EMAIL_TEMPLATE}
- GCNOTIFY_ONBOARDING_REQUEST_SMS_TEMPLATE=${GCNOTIFY_ONBOARDING_REQUEST_SMS_TEMPLATE}
- GCNOTIFY_EMAIL_URL=${GCNOTIFY_EMAIL_URL}
- GCNOTIFY_SMS_URL=${GCNOTIFY_SMS_URL}
- APP_HOST=${APP_HOST}
volumes:
- ./api:/opt/app-root/src
- /opt/app-root/src/node_modules # prevents local node_modules overriding container node_modules
networks:
- biohubbc-network
depends_on:
- db
- db_setup
# Build the api_worker docker image
queue:
image: ${DOCKER_PROJECT_NAME}-queue-${DOCKER_NAMESPACE}-img
container_name: ${DOCKER_PROJECT_NAME}-queue-${DOCKER_NAMESPACE}-container
build:
context: ./api
dockerfile: ./.docker/queue/Dockerfile
environment:
- NODE_ENV=${NODE_ENV}
- S3_KEY_PREFIX=${S3_KEY_PREFIX}
- API_HOST=${API_HOST}
- API_PORT=${API_PORT}
- TZ=${API_TZ}
- DB_HOST=${DB_HOST}
- DB_USER_API=${DB_USER_API}
- DB_USER_API_PASS=${DB_USER_API_PASS}
- DB_PORT=5432
- DB_DATABASE=${DB_DATABASE}
- DB_SCHEMA=${DB_SCHEMA}
- DB_POOL_SIZE=${DB_POOL_SIZE}
- DB_CONNECTION_MAX_USES=${DB_CONNECTION_MAX_USES}
- DB_CONNECTION_TIMEOUT=${DB_CONNECTION_TIMEOUT}
- DB_IDLE_TIMEOUT=${DB_IDLE_TIMEOUT}
- OBJECT_STORE_URL=${OBJECT_STORE_URL}
- OBJECT_STORE_ACCESS_KEY_ID=${OBJECT_STORE_ACCESS_KEY_ID}
- OBJECT_STORE_SECRET_KEY_ID=${OBJECT_STORE_SECRET_KEY_ID}
- OBJECT_STORE_BUCKET_NAME=${OBJECT_STORE_BUCKET_NAME}
- LOG_LEVEL=${LOG_LEVEL}
- APP_HOST=${APP_HOST}
volumes:
- ./api:/opt/app-root/src
- /opt/app-root/src/node_modules # prevents local node_modules overriding container node_modules
networks:
- biohubbc-network
depends_on:
- db
- db_setup
# Build the clamav docker image
clamav:
image: mkodockx/docker-clamav:latest
container_name: ${DOCKER_PROJECT_NAME}-clamav-${DOCKER_NAMESPACE}-container
ports:
- ${CLAMAV_PORT}:3310
networks:
- biohubbc-network
## Build the app docker image
app:
image: ${DOCKER_PROJECT_NAME}-app-${DOCKER_NAMESPACE}-img
container_name: ${DOCKER_PROJECT_NAME}-app-${DOCKER_NAMESPACE}-container
build:
context: ./app
dockerfile: ./.docker/app/Dockerfile
stdin_open: true
ports:
- ${APP_PORT}:${APP_PORT}
environment:
- NODE_ENV=${NODE_ENV}
- NODE_OPTIONS=${APP_NODE_OPTIONS}
- REACT_APP_NODE_ENV=${NODE_ENV}
- PORT=${APP_PORT}
- REACT_APP_API_HOST=${API_HOST}
- REACT_APP_API_PORT=${API_PORT}
- REACT_APP_MAX_UPLOAD_NUM_FILES=${MAX_UPLOAD_NUM_FILES}
- REACT_APP_MAX_UPLOAD_FILE_SIZE=${MAX_UPLOAD_FILE_SIZE}
- REACT_APP_SITEMINDER_LOGOUT_URL=${SITEMINDER_LOGOUT_URL}
- REACT_APP_KEYCLOAK_HOST=${KEYCLOAK_HOST}
- REACT_APP_KEYCLOAK_REALM=${KEYCLOAK_REALM}
- REACT_APP_KEYCLOAK_CLIENT_ID=${KEYCLOAK_CLIENT_ID}
volumes:
- ./app:/opt/app-root/src
- /opt/app-root/src/node_modules # prevents local node_modules overriding container node_modules
networks:
- biohubbc-network
## Run the database migrations and seeding
db_setup:
image: ${DOCKER_PROJECT_NAME}-db-setup-${DOCKER_NAMESPACE}-img
container_name: ${DOCKER_PROJECT_NAME}-db-setup-${DOCKER_NAMESPACE}-container
build:
context: ./database
dockerfile: ./.docker/db/Dockerfile.setup
environment:
- NODE_ENV=${NODE_ENV}
- DB_HOST=${DB_HOST}
- DB_ADMIN=${DB_ADMIN}
- DB_ADMIN_PASS=${DB_ADMIN_PASS}
- DB_PORT=5432
- DB_DATABASE=${DB_DATABASE}
- DB_SCHEMA=${DB_SCHEMA}
- DB_USER_API=${DB_USER_API}
- DB_USER_API_PASS=${DB_USER_API_PASS}
- ENABLE_MOCK_FEATURE_SEEDING=${ENABLE_MOCK_FEATURE_SEEDING}
- NUM_MOCK_FEATURE_SUBMISSIONS=${NUM_MOCK_FEATURE_SUBMISSIONS}
volumes:
- /opt/app-root/src/node_modules # prevents local node_modules overriding container node_modules
networks:
- biohubbc-network
depends_on:
db:
condition: service_healthy
command: ["npm", "run", "setup"]
## Run the database migrations
db_migrate:
image: ${DOCKER_PROJECT_NAME}-db-migrate-${DOCKER_NAMESPACE}-img
container_name: ${DOCKER_PROJECT_NAME}-db-migrate-${DOCKER_NAMESPACE}-container
build:
context: ./database
dockerfile: ./.docker/db/Dockerfile.migrate
environment:
- NODE_ENV=${NODE_ENV}
- DB_HOST=${DB_HOST}
- DB_ADMIN=${DB_ADMIN}
- DB_ADMIN_PASS=${DB_ADMIN_PASS}
- DB_PORT=5432
- DB_DATABASE=${DB_DATABASE}
- DB_SCHEMA=${DB_SCHEMA}
- DB_USER_API=${DB_USER_API}
- DB_USER_API_PASS=${DB_USER_API_PASS}
volumes:
- /opt/app-root/src/node_modules # prevents local node_modules overriding container node_modules
networks:
- biohubbc-network
depends_on:
db:
condition: service_healthy
command: ["npm", "run", "migrate-latest"]
## Rollback the latest database migrations
db_rollback:
image: ${DOCKER_PROJECT_NAME}-db-rollback-${DOCKER_NAMESPACE}-img
container_name: ${DOCKER_PROJECT_NAME}-db-rollback-${DOCKER_NAMESPACE}-container
build:
context: ./database
dockerfile: ./.docker/db/Dockerfile.rollback
environment:
- NODE_ENV=${NODE_ENV}
- DB_HOST=${DB_HOST}
- DB_ADMIN=${DB_ADMIN}
- DB_ADMIN_PASS=${DB_ADMIN_PASS}
- DB_PORT=5432
- DB_DATABASE=${DB_DATABASE}
- DB_SCHEMA=${DB_SCHEMA}
- DB_USER_API=${DB_USER_API}
- DB_USER_API_PASS=${DB_USER_API_PASS}
volumes:
- /opt/app-root/src/node_modules # prevents local node_modules overriding container node_modules
networks:
- biohubbc-network
depends_on:
db:
condition: service_healthy
command: ["npm", "run", "migrate-rollback"]
networks:
biohubbc-network:
driver: bridge
volumes:
postgres:
name: ${DOCKER_PROJECT_NAME}-db-${DOCKER_NAMESPACE}-vol