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poretools not following symolic links... #166

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nickschurch opened this issue Feb 8, 2018 · 0 comments
Open

poretools not following symolic links... #166

nickschurch opened this issue Feb 8, 2018 · 0 comments

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@nickschurch
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I have a directory A and within it symbolic links for data directories B & C, both of which contain the standard fast5 output directories. Running poretools fastq --type all A/ doesn't recurse into B or C and doesn't find any of the files.

Running poretools fastq --type all B/ or poretools fastq --type all C/ works fine.
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@nickschurch