Singularity pull error: FATAL: While getting image info: error decoding image: invalid ObjectId in JSON

[hoonghim]

Version of Singularity: 3.2.0-1

What version of Singularity are you using? Run:

$ singularity --version
singularity version 3.2.0-1

singularity pull library://kt16/default/sc-dandelion:latest

Expected behavior

What did you expect to see when you do...?

Based on the dandelion github installation guide (https://github.com/zktuong/dandelion),
This will load up a container that has all the required dependencies installed.

Actual behavior

What actually happend? Why was it incorrect?

FATAL: While getting image info: error decoding image: invalid ObjectId in JSON: "kt16/default/sc-dandelion:sha256.afdaf7ca5a9183a771ae3030542b6d57b846d5db8087c158e03ef0e2eb133c81"

Steps to reproduce this behavior

How can others reproduce this issue/problem?

singularity pull library://kt16/default/sc-dandelion:latest

What OS/distro are you running

$ cat /etc/os-release

PRETTY_NAME="Ubuntu 22.04.1 LTS"
NAME="Ubuntu"
VERSION_ID="22.04"
VERSION="22.04.1 LTS (Jammy Jellyfish)"
VERSION_CODENAME=jammy
ID=ubuntu
ID_LIKE=debian

How did you install Singularity

I didn't install Singularity. One of my lab members had previously installed Singularity (version 3.2.0-1) and I was unable to upgrade the version of Singularity.

Could you let me know how to upgrade Singularity without removing the installed version or how to install dandelion using the current Singularity version (version 3.2.0-1)?

Thanks in advance.

Sincerely,

Seunghoon

[github-actions]

New issues are no longer accepted in this repository. If singularity --version says singularity-ce, submit instead to https://github.com/sylabs/singularity, otherwise submit to https://github.com/apptainer/apptainer.