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DeepCycle.py assumes umap already run on Anndata object #20

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adam-cornwell opened this issue Feb 13, 2024 · 0 comments
Open

DeepCycle.py assumes umap already run on Anndata object #20

adam-cornwell opened this issue Feb 13, 2024 · 0 comments

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@adam-cornwell
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I pre-processed anndata objects as the existing documentation suggested, but then found the script errored when trying to access UMAP embeddings that didn't exist yet. It would be great to add a note about running UMAP on the anndata object first to the docs. Thanks!

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