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After manual correction of juicebox convert to fasta #327

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ABDULLAHGUJJAR opened this issue Sep 7, 2023 · 0 comments
Open

After manual correction of juicebox convert to fasta #327

ABDULLAHGUJJAR opened this issue Sep 7, 2023 · 0 comments

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@ABDULLAHGUJJAR
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Hi Juicebox team,

java -Xmx32G -jar juicer_tools.2.20.00.jar post -o output abdullah_manual_out_JBAT.review.assembly out_JBAT.liftover.agp yahs.out_scaffolds_final.fa

WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2023-09-07T20:51:58,793] [Globals.java:138] [main] Development mode is enabled
Exception in thread "main" jargs.gnu.CmdLineParser$UnknownOptionException: Unknown option '-o'
at jargs.gnu.CmdLineParser.parse(CmdLineParser.java:475)
at jargs.gnu.CmdLineParser.parse(CmdLineParser.java:426)
at juicebox.tools.HiCTools.main(HiCTools.java:67)

please can you guide me about this error. Thanks

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