We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Hello everyone,
When using sourceSlurm or slurmr via command line, and the R file contain the following sbatch directives
#!/bin/sh #SBATCH --job-name=simRMD #SBATCH --mem-per-cpu=10G #SBATCH --nodes=1 #SBATCH --ntasks=1 #SBATCH --cpus-per-task=1 #SBATCH --exclusive
it returns the following error: sbatch: error: Invalid --exclusive specification Return code (status): 255
looking at the generated .sh file I see that slurmr appends the following : #SBATCH --exclusive=--exclusive is that behaviour expected ?
#SBATCH --exclusive=--exclusive
Best,
Mahmoud
The text was updated successfully, but these errors were encountered:
Interesting! Can you provide a little bit more of detail? Could you share the created batch file?
Sorry, something went wrong.
Sure, hers's the header in the .R file
#!/bin/sh #SBATCH --job-name=Exclusive_Test #SBATCH --mem-per-cpu=5G #SBATCH --ntasks=1 #SBATCH --cpus-per-task=2 #SBATCH --time=2-00:00:00 #SBATCH --exclusive
the outputed .sh file fails and the content:
#!/bin/sh #SBATCH --job-name=Exclusive_Test #SBATCH --mem-per-cpu=5G #SBATCH --ntasks=1 #SBATCH --cpus-per-task=2 #SBATCH --time=2-00:00:00 #SBATCH --exclusive=--exclusive .../Rscript --vanilla *.R
No branches or pull requests
Hello everyone,
When using sourceSlurm or slurmr via command line, and the R file contain the following sbatch directives
it returns the following error:
sbatch: error: Invalid --exclusive specification
Return code (status): 255
looking at the generated .sh file I see that slurmr appends the following :
#SBATCH --exclusive=--exclusive
is that behaviour expected ?
Best,
Mahmoud
The text was updated successfully, but these errors were encountered: