/
_config.yml
108 lines (94 loc) · 2.26 KB
/
_config.yml
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name: Taming the BEAST
description: BEAST2 tutorials for the community, by the community!
url: https://taming-the-beast.org/
permalink: /:categories/:title/
future: true
exclude:
- "*.branches"
- "*.kml"
- "*.log"
- "*.log,gz"
- "*.nb"
- "*.trees"
- "*.trees.gz"
- "*.cpp"
- "*.h"
- "*.hh"
- "*.java"
- "*.jar"
- "*.csv"
- "*.tsv"
- "*.txt"
- "*.rb"
- "*.py"
- "*.class"
- "*.tips"
- "*.fasta"
- "*.nex"
- "Gemfile"
- "Gemfile.lock"
- "github.token"
defaults:
-
scope:
path: "contribute/Hosting-guide"
values:
layout: "post"
-
scope:
path: "contribute/Hosting-guide-printable"
values:
layout: "post-printable"
scholar:
style: apa
locale: en
sort_by: none
order: ascending
group_by: none
group_order: ascending
source: /tutorials
bibliography: references.bib
bibliography_template: "{{reference}}"
replace_strings: true
join_strings: true
bibtex_filters:
- superscript
- latex
details_dir: bibliography
details_layout: bibtex.html
details_link: Details
query: "@*"
tutorials:
- taming-the-beast/Introduction-to-BEAST2
- taming-the-beast/Prior-selection
- taming-the-beast/Troubleshooting-convergence-issues
- taming-the-beast/Troubleshooting-initialization-issues
- taming-the-beast/Skyline-plots
- taming-the-beast/Substitution-model-averaging
- taming-the-beast/FBD-tutorial
- taming-the-beast/Bacter-Tutorial
- taming-the-beast/StarBeast-Tutorial
- taming-the-beast/Molecular-Dating-Tutorial
- taming-the-BEAST/Mascot-Tutorial
#- genomescale/species-tree-clocks
- genomescale/calibrated-species-trees
- taming-the-beast/Structured-coalescent
- taming-the-beast/Structured-birth-death-model
- bjoelle/MSBD-tutorial
- bjoelle/ClaDS-tutorial
- bjoelle/BFD_snapper_tutorial
- taming-the-beast/SCOTTI-Tutorial
- duchene/adequacy_tutorial
- genomescale/starbeast2-tutorial
- mmatschiner/CladeAge-Tutorial
- nicfel/AIM-Tutorial
- rbouckaert/NS-tutorial
- walterxie/MEP-tutorial
- nicfel/CoupledMCMC-Tutorial
- KonstantinHoffmann/LanguagePhylogenies
- nicfel/Reassortment-Tutorial
- boskovav/PIQMEE-Tutorial
- bethany-j-allen/Skyline-analyses-for-macroevolution
plugins:
- jekyll-katex
- jekyll-scholar