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Check predicted growth rate by ecYeastGEM #131

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IVANDOMENZAIN opened this issue Feb 1, 2021 · 0 comments
Open

Check predicted growth rate by ecYeastGEM #131

IVANDOMENZAIN opened this issue Feb 1, 2021 · 0 comments
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bug gecko1-2 Issues related to GECKO version 1 and/or 2

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As noticed in PR #128, the predicted max. growth rate for the ecYeastGEM growing on glucose minimal media does not correspond to the provided experimental value in getModelParameters. Actually, the value recorder in ecYeastGEM_exchangeFluxes.txt is 22% lower than the experimental growth rate, calling for a detailed revision of the constraining steps in the getConstrainedModel module.
@IVANDOMENZAIN IVANDOMENZAIN self-assigned this Feb 1, 2021
@edkerk edkerk added the gecko1-2 Issues related to GECKO version 1 and/or 2 label Mar 5, 2023
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bug gecko1-2 Issues related to GECKO version 1 and/or 2
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@edkerk @IVANDOMENZAIN