/
mk-module-list.pl
executable file
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/
mk-module-list.pl
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#!/usr/bin/perl
#
# /usr/bin/modulecmd bash whatis >& module.whatis
#
# -html to generate HTML output, uses module-style.css
#
# Nov 10 2021 - SGK - added more sections (Python, NVIDIA) and more stuff (julia)
# Nov 13 2021 - SGK - added xKey to exclude w/ grep(!/$xKey/, (grep (/$key/, $modList)))
#
# <- Last updated: Sat Nov 13 08:14:53 2021 -> SGK
#
$verNo = 'v2.0/0';
$useHTML = 0;
if ($ARGV[0] eq '-html') { $useHTML = 1;}
#
$base = '/share/apps/modulefiles';
@modList = `cat module.whatis`;
## $key; $xKey; $name; $check
@catList = (
'^bioinfo;;BioInformatics;1',
'^java/;;Java;1',
'^tools/;/python|/julia|/fl|/gdl;Tools;1',
'^python|/python;;Python;0',
'^idl/|^tools/fl|^tools/gdl|^matlab/|^tools/julia;;IDL, MATLAB or JULIA;0',
'^gcc/[0-9.]*:;;GNU compilers;0',
'^gcc/.*mpich|^gcc/.*mvapich|^gcc/.*openmpi;;GNU MPI;0',
'^gcc/.*/gsl;;GNU gsl;0',
'^intel/[0-9.]*:;;Intel compilers;0',
'^intel/mpi|^intel/mvapich|^intel/openmpi|^intel/.*/mpi|^intel/.*/mvapich|^intel/.*/openmpi'.
';;Intel MPI;0',
'^pgi/[0-9.]*:;;PGI compilers;0',
'^pgi/mvapich|^pgi/openmpi|^pgi/.*/mvapich|^pgi/.*/mpi|^pgi/.*/openmpi;;PGI MPI;0',
'^nvidia/[0-9.]*:;;NVIDIA compilers;0',
'^nvidia/mvapich|^nvidia/openmpi|^nvidia/.*/mvapich|^nvidia/.*/mpi|^nvidia/.*/openmpi;;NVIDIA MPI;0',
'^nvidia/.*/cuda|^cuda;;NVIDIA cuda;0',
'^gis|^gnuplot|^gsl|^blac|^fft'.
'^gdb|^hdf5|^intel-tbb-oss|^lapack|^mmfs|^mpich|^mvapich|^netcdf|'.
'^openblas|^openmpi|^scalapack'.';;Misc;0'
);
%links = ( 'BioInformatics' => 'bioinfo',
'Java' => 'java',
'Tools' => 'tools',
'Python' => 'python',
'IDL, MATLAB or JULIA' => 'idl/matlab/julia',
'GNU compilers' => 'gcc',
'GNU MPI' => 'gcc-mpich',
'GNU gsl' => 'gcc-gsl',
'Intel compilers' => 'intel',
'Intel MPI' => 'intel-mpi',
'PGI compilers' => 'pgi',
'PGI MPI' => 'pgi-mpi',
'NVIDIA compilers' => 'nvidia',
'NVIDIA MPI' => 'nvidia-mpi',
'NVIDIA cuda' => 'nvidia-cuda',
'Misc' => 'misc',
);
if ($useHTML) {
print <<__EOF__;
<html>
<head>
<title>Hydra Modules</title>
<link rel="stylesheet" type="text/css" href="module-style.css">
</head>
<h1>List of Available Modules on Hydra</h1>
<ul>
<li> <a href="#bioinfo">BioInformatics</a>
<li> <a href="#java">Java</a>
<li> <a href="#tools">Tools</a>
<li> <a href="#python">Python</a>
<li> <a href="#idl/matlab/julia">IDL/MATLAB/julia</a>
<li> <a href="#gcc">GNU compilers</a>
<ul>
<li> <a href="#gcc-mpich">GNU MPI</a>
<li> <a href="#gcc-gsl">GNU gsl</a>
</ul>
<li> <a href="#intel">Intel compilers</a>
<ul>
<li> <a href="#intel-mpi">Intel MPI</a>
</ul>
<li> <a href="#pgi">PGI compilers</a>
<ul>
<li> <a href="#pgi-mpi">PGI MPI</a>
</ul>
<li> <a href="#nvidia">NVIDIA compilers</a>
<ul>
<li> <a href="#nvidia-mpi">NVIDIA MPI</a>
<li> <a href="#nvidia-mpi">NVIDIA cuda</a>
</ul>
<li> <a href="#misc">Misc</a>
</ul>
__EOF__
$table = 0;
}
foreach $cat (@catList) {
($key, $xKey, $val, $chk) = split(';', $cat);
if ($useHTML) {
if ($table) { print "</table><p>\n"; }
print <<__EOF__;
<h2 id="$links{$val}">$val</h2>
<table rules='rows'>
<col width="350">
<col width="850">
<tr><td><b>Module</b></td><td><b>Description<b></td></tr>
__EOF__
$table = 1;
} else {
print "=:$val\n";
}
if ($xKey) {
@list = sort(grep !/$xKey/, (grep /$key/, @modList));
} else {
@list = sort(grep /$key/, @modList);
}
$prev = '';
$defVer = '?';
foreach $line (@list) {
## print STDERR ">>$cat>$line\n";
$line =~ s/Description: //;
$line =~ s/- Home.*//;
($name, $descr) = split(':', $line, 2);
chop($descr);
if ($name =~/\//) {
@w = split('/', $name);
$version = pop(@w);
$version =~ s/ *$//;
$name = join('/',@w);
} else {
$version = '';
}
if ($name ne $prev && $chk == 1) {
$vf = "$base/$name/.version";
## print STDERR "> $vf\n";
if (-e $vf) {
@def = grep /ModulesVersion/, `cat $vf`;
@w = split(' ', $def[0]);
$defVer = $w[2];
$defVer =~ s/\"//g;
## print STDERR "$name $defVer\n";
} else {
$defVer = '?';
}
}
#
## print STDERR "$defVer:$version:$line";
#
if ($defVer eq '?') {
if ($useHTML) {
printf "<tr><td><tt>%-35s</tt></td><td>%s</td></tr>\n", $name.'/'.$version, $descr;
} else {
printf "%-35s:%s\n", $name.'/'.$version, $descr;
}
} elsif ($version eq $defVer) {
if ($useHTML) {
printf "<tr><td><tt>%-35s</tt></td><td>%s - def. version, others may be avail.</td></tr>\n", $name, $descr;
} else {
## printf "%-35s:%s (other versions may be avail.)\n", $name, $descr;
printf "%-35s:%s - def. version, others may be avail.\n", $name, $descr;
}
}
#
$prev = $name;
}
}
if ($table) { print "</table><p>\n"; }
$time = scalar localtime(time());
$time =~ s/ (..):(..):(..) (....)/ $4 at $1:$2/;
if ($useHTML) {
print <<__EOF__
<p class="version">
Module list last updated as of $time with <tt>mk-module-list.pl</tt> $verNo</span>
<body></body></html>
__EOF__
} else {
print "=:Module list last updated as of ".$time." with mk-module-list.pl $verNo\n";
}
#