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DESCRIPTION
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DESCRIPTION
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Package: Glimma
Type: Package
Title: Interactive HTML graphics
Version: 1.15.3
Date: 2016-12-21
Authors@R:
c(
person(
"Shian", "Su",
role = c("aut", "cre"),
email = "su.s@wehi.edu.au"
),
person(
"Matthew", "Ritchie",
role = c("aut")
),
person(
"Charity", "Law",
role = c("aut")
),
person(
"Stuart", "Lee",
role = c("ctb")
)
)
Description: This package generates interactive visualisations for analysis of RNA-sequencing data using output from limma, edgeR or DESeq2 packages in an HTML page. The interactions are built on top of the popular static representations of analysis results in order to provide additional information.
biocViews:
DifferentialExpression,
GeneExpression,
Microarray,
ReportWriting,
RNASeq,
Sequencing,
Visualization
Depends: R (>= 3.4.0)
Imports:
edgeR,
grDevices,
jsonlite,
methods,
stats,
S4Vectors,
utils
Suggests:
BiocStyle,
IRanges,
GenomicRanges,
SummarizedExperiment,
DESeq2,
limma,
testthat,
knitr,
rmarkdown,
pryr
License: GPL-3 | file LICENSE
URL: https://github.com/Shians/Glimma
BugReports: https://github.com/Shians/Glimma/issues
RoxygenNote: 7.1.0
NeedsCompilation: no
LazyData: true
VignetteBuilder: knitr
Encoding: UTF-8