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Popular repositories

  1. Cjejuni_AR_EPI_MI Cjejuni_AR_EPI_MI Public

    SAS code for epidemiologic analyses associated with antibiotic resistant "C.jejuni" in Michigan. Manning Lab. Rodrigues et al., Frontiers in Public Health, 2021

    SAS

  2. Pangenomic_div._C.jejuni Pangenomic_div._C.jejuni Public

    Scripts and code for analyses of "C.jejuni" sequences from patients with gastroenteritis in Michigan. Manning Lab. Rodrigues et al., Microbial Genomics, 2023.

    Python 1

  3. Enterobacter-blood-local-and-global-analysis Enterobacter-blood-local-and-global-analysis Public

    Scripts and code for Enterobacter blood samples isolated from the blood, NH and global. Andam Lab.

  4. Resistant_STEC_MI Resistant_STEC_MI Public

    Scripts for bioinformatic analyses associated with resistance assessment of STEC in Michigan. Manning Lab. Mukherjee et al., Antimicrobial Agents and Chemotherapy, 2021

    Python

  5. HepB_elimination_Americas HepB_elimination_Americas Public

    Scripts and code for a a review of the progress towards elimination of HepB in the Americas. CDC Global Immunization Division, and The Pan American Health Organization.

  6. NY_Enterics_2018-2022 NY_Enterics_2018-2022 Public

    Scripts and code for enteric analyses isolated from patients in NY. Andam Lab.