Fake data is within these folders of the module:
├── data
│ ├── mimic_csv_files
│ │ ├── ADMISSIONS.csv
│ │ ├── DIAGNOSES_ICD.csv
│ │ ├── D_ICD_DIAGNOSES.csv
│ │ ├── PATIENTS.csv
│ └── waveform_data
│ ├── MIMIC-III_Matched_Summary_data.csv
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Overwrite ADMISSIONS.csv, DIAGNOSES_ICD.csv, D_ICD_DIAGNOSES.csv, and PATIENTS.csv with data from the real MIMIC db.
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Create a csv file called MIMIC-III_Matched_Summary_data.csv based on MIMIC-III Waveform Database Matched Subset, which has the following structure:
| patient | record | file |
|---|---|---|
| p000001 | 1943-03-16-16-05 | 1 |
| p000001 | 1943-03-16-16-05 | 2 |
| p000001 | 1943-03-16-16-05 | 3 |