/
app.py
641 lines (581 loc) · 22.7 KB
/
app.py
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import json
import os
import re
from contextlib import closing
from datetime import datetime
from difflib import unified_diff
from inspect import cleandoc
from tempfile import gettempdir
if not os.environ.get("CACHE_DIR"):
from conda_oci_mirror import defaults
os.environ["CACHE_DIR"] = defaults.CACHE_DIR = os.path.join(
gettempdir(), "conda-oci-mirror-cache"
)
import requests
import streamlit as st
from conda_forge_metadata.artifact_info.info_json import get_artifact_info_as_json
from conda_forge_metadata.feedstock_outputs import package_to_feedstock
from conda_package_streaming.package_streaming import stream_conda_component
from conda_package_streaming.url import conda_reader_for_url
from streamlit.logger import get_logger
from xml.etree import ElementTree as ET
from version_order import VersionOrder
logger = get_logger(__name__)
st.set_page_config(
page_title="conda metadata browser",
page_icon="📦",
initial_sidebar_state="expanded",
)
ONE_DAY = 60 * 60 * 24
TWO_HOURS = 60 * 60 * 4
THIRTY_MINS = 60 * 30
FIFTEEN_MINS = 60 * 15
CHANNELS = ["conda-forge", "bioconda", "pkgs/main", "pkgs/r"]
# pkgs/msys2 does not seem to offer .conda artifacts; leave out for now
def bar_esc(s):
"Escape vertical bars in tables"
return s.replace("|", "\\|")
@st.cache_data(ttl=FIFTEEN_MINS, max_entries=5)
def rssdata(channel="conda-forge"):
if channel.startswith("pkgs/"):
r = requests.get(f"https://repo.anaconda.com/{channel}/rss.xml")
else:
r = requests.get(f"https://conda.anaconda.org/{channel}/rss.xml")
r.raise_for_status()
return ET.ElementTree(ET.fromstring(r.text))
@st.cache_data(ttl=FIFTEEN_MINS, max_entries=100)
def channeldata(channel="conda-forge"):
if channel.startswith("pkgs/"):
r = requests.get(f"https://repo.anaconda.com/{channel}/channeldata.json")
else:
r = requests.get(f"https://conda.anaconda.org/{channel}/channeldata.json")
r.raise_for_status()
return r.json()
@st.cache_data(ttl=FIFTEEN_MINS, max_entries=100)
def api_data(package_name, channel="conda-forge"):
if channel.startswith("pkgs/"):
channel = channel.split("/", 1)[1]
r = requests.get(f"https://api.anaconda.org/package/{channel}/{package_name}/files")
r.raise_for_status()
return r.json()
@st.cache_data(ttl=ONE_DAY, max_entries=2)
def repodata_patches(channel="conda-forge"):
package_name = f"{channel}-repodata-patches"
data = api_data(package_name, channel)
most_recent = sorted(data, key=lambda x: x["attrs"]["timestamp"], reverse=True)[0]
filename, conda = conda_reader_for_url(f"https:{most_recent['download_url']}")
patches = {}
with closing(conda):
for tar, member in stream_conda_component(filename, conda, component="pkg"):
if member.name.endswith("patch_instructions.json"):
patches[member.name.split("/")[0]] = json.load(tar.extractfile(member))
return patches
@st.cache_data(ttl=ONE_DAY, max_entries=1000)
def provenance_urls(package_name, channel="conda-forge", data=None):
if not package_name or not data:
return ""
if data is not None:
remote_url = data.get("rendered_recipe", {}).get("extra", {}).get("remote_url")
if remote_url:
if remote_url.startswith("git@github.com:"):
remote_url = remote_url.replace("git@github.com:", "https://github.com/")
if remote_url.endswith(".git"):
remote_url = remote_url[:-4]
sha = data.get("rendered_recipe", {}).get("extra", {}).get("sha")
if sha and remote_url.startswith("https://github.com/"):
return [f"{remote_url}/commit/{sha}"]
return remote_url
if channel == "conda-forge":
feedstocks = package_to_feedstock(package_name)
return [f"https://github.com/conda-forge/{f}-feedstock" for f in feedstocks]
elif channel == "bioconda":
return [
f"https://github.com/bioconda/bioconda-recipes/tree/master/recipes/{package_name}"
]
elif channel.startswith("pkgs/"):
return [f"https://github.com/AnacondaRecipes/{package_name}-feedstock"]
return ""
def package_names(channel="conda-forge"):
names = [""]
for name in channeldata(channel)["packages"].keys():
if channel == "pkgs/r":
if name not in ("r", "rpy2", "rstudio") and not name.startswith(("r-", "_r-", "mro-")):
continue
elif channel == "pkgs/msys2" and not name.startswith(("m2-", "m2w64-", "msys2-")):
continue
names.append(name)
return sorted(
names,
key=lambda x: f"zzzzzzz{x}" if x.startswith("_") else x,
)
def subdirs(package_name, channel="conda-forge"):
if not package_name:
return []
return sorted(channeldata(channel)["packages"][package_name]["subdirs"])
def _best_version_in_subdir(package_name, channel="conda-forge"):
if not package_name:
return None, None
return max(
[
(subdir, versions(package_name, subdir, channel)[0])
for subdir in subdirs(package_name, channel)
],
key=lambda x: VersionOrder(x[1]),
)
def versions(package_name, subdir, channel="conda-forge"):
if not package_name or not subdir:
return []
data = api_data(package_name, channel)
return sorted(
{
pkg["version"]: None
for pkg in data
if pkg["attrs"]["subdir"] == subdir and "main" in pkg["labels"]
},
key=VersionOrder,
reverse=True,
)
def builds(package_name, subdir, version, channel="conda-forge"):
if not package_name or not subdir or not version:
return []
data = api_data(package_name, channel)
build_str_to_num = {
pkg["attrs"]["build"]: pkg["attrs"]["build_number"]
for pkg in data
if pkg["attrs"]["subdir"] == subdir and pkg["version"] == version
}
return [
k
for k, _ in sorted(
build_str_to_num.items(), key=lambda kv: (kv[1], kv[0]), reverse=True
)
]
def extensions(package_name, subdir, version, build, channel="conda-forge"):
if not package_name or not subdir or not version or not build:
return []
if channel.startswith("pkgs/"):
return ["conda"]
data = api_data(package_name, channel)
return list(
{
("conda" if pkg["basename"].endswith(".conda") else "tar.bz2"): None
for pkg in data
if pkg["attrs"]["subdir"] == subdir
and pkg["version"] == version
and pkg["attrs"]["build"] == build
}
)
@st.cache_data(show_spinner=False)
def patched_repodata(channel, subdir, artifact):
patches = repodata_patches(channel)[subdir]
key = "packages.conda" if artifact.endswith(".conda") else "packages"
patched_data = patches[key].get(artifact, {})
yanked = artifact in patches["remove"]
return patched_data, yanked
def artifact_metadata(channel, subdir, artifact):
if channel.startswith("pkgs/"):
return get_artifact_info_as_json(
channel=f"https://repo.anaconda.com/{channel}",
subdir=subdir,
artifact=artifact,
backend="streamed",
skip_files_suffixes=(),
)
data = get_artifact_info_as_json(
channel=channel,
subdir=subdir,
artifact=artifact,
backend="oci",
skip_files_suffixes=(),
)
if (data and data.get("name")) or artifact.endswith(".tar.bz2"):
return data
# .conda artifacts can be streamed directly from an anaconda.org channel
return get_artifact_info_as_json(
channel=channel,
subdir=subdir,
artifact=artifact,
backend="streamed",
skip_files_suffixes=(),
)
def is_archived_feedstock(feedstock):
owner, repo = feedstock.split("/")[-2:]
if owner != "conda-forge":
return False
r = requests.get(f"https://api.github.com/repos/{owner}/{repo}")
if r.ok:
return r.json().get("archived", False)
return False
def parse_url_params():
"""
Allowed query params:
- q: channel
- q: channel/package_name
- q: channel/subdir::package_name-version-build
- q: channel/subdir/package_name-version-build.extension
"""
channel, subdir, artifact, package_name, version, build, extension = [None] * 7
path = None
url_params = st.query_params.to_dict()
ok = True
if "q" in url_params:
query = url_params["q"]
if query in CHANNELS: # channel only
channel = query
elif "/" in query:
try:
components = query.split("/")
if len(components) == 2: # cannot be pkgs/main because we checked above
channel, artifact = components
subdir = None
elif len(components) == 3:
channel, subdir, artifact = components
if f"{channel}/{subdir}" in CHANNELS:
channel = f"{channel}/{subdir}"
subdir = None
elif len(components) == 4:
*channel, subdir, artifact = components
channel = "/".join(channel)
else:
raise ValueError("Invalid number of URL components")
except Exception as exc:
logger.error(exc)
ok = False
else:
if artifact:
if artifact.endswith(".conda"):
extension = "conda"
rest_of_artifact = artifact[:-len(".conda")]
elif artifact.endswith(".tar.bz2"):
extension = "tar.bz2"
rest_of_artifact = artifact[:-len(".tar.bz2")]
else:
extension = None
rest_of_artifact = artifact
try:
package_name, version, build = rest_of_artifact.rsplit("-", 2)
except Exception:
package_name = artifact
elif "path" in url_params:
path = url_params["path"]
elif url_params:
ok = False
return {
"channel": channel,
"subdir": subdir,
"artifact": artifact,
"package_name": package_name,
"version": version,
"build": build,
"extension": extension,
"path": path,
}, ok
url_params, url_ok = parse_url_params()
if not url_ok:
st.error(
f"Invalid URL params: `{url_params}`.\n\n"
"Allowed syntaxes: \n"
"- `/?q=channel`.\n"
"- `/?q=channel/package_name`.\n"
"- `/?q=channel/subdir/package_name`.\n"
"- `/?q=channel/subdir/package_name-version-build`.\n"
"- `/?q=channel/subdir/package_name-version-build.extension`.\n"
)
st.query_params.clear()
st.stop()
elif url_params["artifact"] and "channel" not in st.session_state:
# Initialize state from URL params, only on first run
# These state keys match the sidebar widgets keys below
st.session_state.channel = url_params["channel"]
if url_params["subdir"] is not None:
st.session_state.subdir = url_params["subdir"]
if url_params["package_name"] is not None:
_package_name = url_params["package_name"]
if _package_name in package_names(url_params["channel"]):
st.session_state.package_name = url_params["package_name"]
else:
st.error(f"Package `{_package_name}` not yet available in {url_params['channel']}!")
if url_params["version"] is not None:
st.session_state.version = url_params["version"]
if url_params["build"] is not None:
st.session_state.build = url_params["build"]
if url_params["extension"] is not None:
st.session_state.extension = url_params["extension"]
with st.sidebar:
st.title(
"conda metadata browser",
help="Web UI to browse the conda package metadata exposed at "
"https://github.com/orgs/channel-mirrors/packages.\n\n "
"If you need programmatic usage, check the [REST API]"
"(https://condametadata-1-n5494491.deta.app).",
)
channel = st.selectbox(
"Select a channel:",
CHANNELS,
key="channel",
# Use the user provided channel (via query params) if possible.
index=CHANNELS.index(url_params["channel"]) if url_params["channel"] in CHANNELS else 0,
)
package_name = st.selectbox(
"Enter a package name:",
options=package_names(channel),
key="package_name",
)
_available_subdirs = subdirs(package_name, channel)
_best_subdir, _best_version = _best_version_in_subdir(package_name, channel)
if _best_subdir and not st.session_state.subdir:
st.session_state.subdir = _best_subdir
if _best_version and not st.session_state.version:
st.session_state.version = _best_version
subdir = st.selectbox(
"Select a subdir:",
options=_available_subdirs,
key="subdir",
)
version = st.selectbox(
"Select a version:",
options=versions(package_name, subdir, channel),
key="version",
)
# Add a small message if a newer version is available in noarch or native subdir
if (
_best_version
and version
and VersionOrder(_best_version) > VersionOrder(version)
and _best_subdir != subdir
and "noarch" in (_best_subdir, subdir)
):
st.markdown(
f"<sup>ℹ️ v{_best_version} is available for {_best_subdir}</sup>",
unsafe_allow_html=True,
)
_build_options = builds(package_name, subdir, version, channel)
if _build_options and not st.session_state.build:
st.session_state.build = _build_options[0]
build = st.selectbox(
"Select a build:",
options=_build_options,
key="build",
)
_extension_options = extensions(package_name, subdir, version, build, channel)
if _extension_options and not st.session_state.extension:
st.session_state.extension = _extension_options[0]
extension = st.selectbox(
"Select an extension:",
options=_extension_options,
key="extension",
)
if channel == "conda-forge":
with_patches = st.checkbox(
"Show patches and broken packages",
value=False,
key="with_patches",
help="Requires extra API calls. Slow!",
)
mark_archived_feedstocks = st.checkbox(
"Mark archived feedstocks",
value=False,
key="mark_archived_feedstocks",
help="Requires extra API calls. Slow!",
)
else:
with_patches = False
mark_archived_feedstocks = False
def input_value_so_far():
value = ""
if channel:
value = f"{channel}/"
if package_name:
if subdir:
value = f"{value}{subdir}::"
value = f"{value}{package_name}-"
if version:
value = f"{value}{version}-"
if build:
value = f"{value}{build}."
if extension:
value = f"{value}{extension}"
return value
def disable_button(query):
if re.match(
r"^[a-z0-9-]+/[a-z0-9-]+::[a-z0-9-]+-[0-9.]+-[a-z0-9_]+.[a-z0-9]+$", query
):
return False
if all([channel, subdir, package_name, version, build, extension]):
return False
return True
c1, c2 = st.columns([1, 0.15])
with c1:
query = st.text_input(
label="Search artifact metadata:",
placeholder="channel/subdir::package_name-version-build.ext",
value=input_value_so_far(),
label_visibility="collapsed",
key="query_input",
disabled=True,
)
with c2:
submitted = st.button(
"Submit",
key="form",
disabled=disable_button(query),
use_container_width=True,
)
if submitted or all([channel, subdir, package_name, version, build]):
channel_subdir, artifact = query.split("::")
channel, subdir = channel_subdir.rsplit("/", 1)
st.query_params.clear()
st.query_params.q = f"{channel}/{subdir}/{artifact}"
with st.spinner("Fetching metadata..."):
data = artifact_metadata(
channel=channel,
subdir=subdir,
artifact=artifact,
)
if not data:
logger.error(f"No metadata found for `{query}`.")
st.error(f"No metadata found for `{query}`.")
st.stop()
elif channel and not package_name and not subdir and not version and not build and not extension:
st.query_params.clear()
st.query_params.q = channel
data = "show_latest"
else:
data = ""
if isinstance(data, dict):
uploaded = "N/A"
try:
timestamp = data.get("index", {}).get("timestamp", 0) / 1000
if timestamp:
uploaded = datetime.fromtimestamp(timestamp).strftime("%Y-%m-%d %H:%M:%S")
except Exception as exc:
logger.error(exc, exc_info=True)
try:
provenance = []
for url in provenance_urls(package_name, channel, data):
if "/commit/" in url:
parts = url.split("/")
commit = parts[-1]
name = parts[-3]
provenance.append(f"[{name} @ `{commit[:7]}`]({url})")
continue
name = url.split("/")[-1]
if mark_archived_feedstocks:
if is_archived_feedstock(url):
name = f"~~{name}~~"
provenance.append(f"[{name}]({url})")
provenance = ", ".join(provenance)
except Exception as exc:
provenance = "N/A"
logger.error(exc, exc_info=True)
if with_patches:
patched_data, yanked = patched_repodata(channel, subdir, artifact)
else:
patched_data, yanked = {}, False
st.markdown(f'## {"❌ " if yanked else ""}{data["name"]} {data["version"]}')
if yanked:
st.error(
"This artifact has been removed from the index and it's only available via URL."
)
about = data.get("about") or data.get("rendered_recipe", {}).get("about", {})
dashboard_urls = [f"[anaconda](https://anaconda.org/{channel.split('/', 1)[-1]}/{data['name']}/files?version={data['version']})"]
if not channel.startswith("pkgs/"):
dashboard_urls += [
f"[ghcr](https://github.com/orgs/channel-mirrors/packages/container/package/{channel}%2F{subdir}%2F{data['name']})",
f"[prefix](https://prefix.dev/channels/{channel}/packages/{data['name']})",
]
dashboard_urls = " · ".join(dashboard_urls)
build_str = data.get("index", {}).get("build", "*N/A*")
if build_str == "*N/A*":
download = "*N/A*"
elif channel.startswith("pkgs/"):
download = f"[artifact download](https://repo.anaconda.com/{channel}/{subdir}/{data['name']}-{data['version']}-{build_str}.{extension})"
else:
download = f"[artifact download](https://conda.anaconda.org/{channel}/{subdir}/{data['name']}-{data['version']}-{build_str}.{extension})"
maintainers = []
for user in (
data.get("rendered_recipe", {})
.get("extra", {})
.get("recipe-maintainers", ["*N/A*"])
):
if user == "*N/A*":
maintainers.append(user)
elif "/" in user: # this is a team
org, team = user.split("/")
maintainers.append(f"[{user}](https://github.com/orgs/{org}/teams/{team})")
else:
maintainers.append(f"[{user}](https://github.com/{user})")
maintainers = ", ".join(maintainers)
project_urls = " · ".join(
[
f"[{url}]({about.get(url)})"
for url in ("home", "dev_url", "doc_url")
if about.get(url)
]
)
st.write(
cleandoc(
f"""
> {" ".join(about.get("summary", "*N/A*").splitlines())}
| **Channel** | **Subdir** | **Build** | **Extension** |
| :---: | :---: | :---: | :---: |
| `{channel}` | `{subdir}` | `{bar_esc(build_str)}` | `{extension}` |
| **License** | **Uploaded** | **Maintainers** | **Provenance** |
| `{bar_esc(about.get("license", "*N/A*"))}` | {uploaded} | {maintainers} | {provenance} |
| **Links:** | {download} | {project_urls} | {dashboard_urls} |
"""
)
)
st.markdown(" ")
dependencies = data.get("index", {}).get("depends", ())
constraints = data.get("index", {}).get("constrains", ())
run_exports = data.get("rendered_recipe", {}).get("build", {}).get("run_exports", ())
if dependencies or constraints or run_exports:
c1, c2 = st.columns([1, 1])
for title, key, specs, col in [
("Dependencies", "depends", dependencies, c1),
("Constraints", "constrains", constraints, c2),
]:
if specs:
with col:
st.write(f"### {title}")
patched_specs = patched_data.get(key, {})
if patched_specs:
specs = list(unified_diff(specs, patched_specs, n=100))[3:]
specs = "\n".join([s.strip() for s in specs])
st.code(specs, language="diff", line_numbers=True)
if run_exports:
with c2:
st.write("### Run exports")
if not hasattr(run_exports, "items"):
run_exports = {"weak": run_exports}
text = "\n".join([f"{key}:\n- {'- '.join(value)}" for key, value in run_exports.items()])
st.code(text, language="yaml", line_numbers=True)
st.markdown(" ")
if data.get("files"):
st.write("### Files")
all_files = "\n".join(data["files"])
st.code(all_files, language="text", line_numbers=True)
st.write("### Raw JSON")
st.json(data, expanded=False)
elif data == "show_latest":
try:
data = rssdata(channel)
except Exception as exc:
logger.error(exc, exc_info=True)
st.error(f"Could not obtain RSS data for {channel}! `{exc.__class__.__name__}: {exc}`")
st.stop()
table = [
"| **#** | **Package** | **Version** | **Platform(s)** | **Published** |",
"| :---: | :---: | :---: | :---: | :---: |",
]
for n, item in enumerate(data.findall("channel/item"), 1):
title = item.find("title").text
name, version, platforms = title.split(" ", 2)
platforms = platforms[1:-1]
published = item.find("pubDate").text
more_url = f"/?q={channel}/{name}"
table.append(f"| {n} | [{name}]({more_url})| {version} | {platforms} | {published}")
st.markdown(f"## Latest {n} updates in [{channel}](https://anaconda.org/{channel.split('/', 1)[-1]})")
st.markdown(f"> Last update: {data.find('channel/pubDate').text}.")
st.markdown("\n".join(table))