docker-compose.vm.yaml

version: '3.2'

services:

  # executor can compile the code
  executor:
    volumes:
      - 'pecan_home:/pecan/'
      - 'pecan_lib:/usr/local/lib/R/site-library/'

  # use same for R development in rstudio
  rstudio:
    volumes:
      - 'pecan_home:/pecan/'
      - 'pecan_home:/home/carya/pecan/'
      - 'pecan_lib:/usr/local/lib/R/site-library/'
      - '/home/carya/rserver.conf:/etc/rstudio/rserver.conf'

  # use following as template for other models
  # this can be used if you are changng the code for a model in PEcAN
  sipnet:
    volumes:
      - 'pecan_lib:/usr/local/lib/R/site-library/'

  # Allow to see all docker containers running, restart and see log files.
  portainer:
   image: portainer/portainer:latest
   command:
     - --admin-password=${PORTAINER_PASSWORD:-}
     - --host=unix:///var/run/docker.sock
   restart: unless-stopped
   networks:
     - pecan
   labels:
     - "traefik.enable=true"
     - "traefik.backend=portainer"
     - "traefik.frontend.rule=${TRAEFIK_FRONTEND_RULE:-}PathPrefixStrip: /portainer"
     - "traefik.website.frontend.whiteList.sourceRange=${TRAEFIK_IPFILTER:-172.16.0.0/12}"
   volumes:
     - /var/run/docker.sock:/var/run/docker.sock
     - portainer:/data

volumes:
  pecan:
    driver_opts:
      type: none
      device: '/home/carya/data'
      o: bind
  pecan_home:
    driver_opts:
      type: none
      device: '/home/carya/pecan'
      o: bind
  pecan_lib:
  portainer: