Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fix for fiberstable #294

Open
wants to merge 5 commits into
base: master
Choose a base branch
from
Open

fix for fiberstable #294

wants to merge 5 commits into from

Conversation

luiztauffer
Copy link
Collaborator

fix #293

@codecov
Copy link

codecov bot commented Jun 20, 2023

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (28418b3) 66.24% compared to head (ce5427b) 66.24%.
Report is 1 commits behind head on master.

Additional details and impacted files
@@           Coverage Diff           @@
##           master     #294   +/-   ##
=======================================
  Coverage   66.24%   66.24%           
=======================================
  Files          35       35           
  Lines        3478     3478           
=======================================
  Hits         2304     2304           
  Misses       1174     1174           
Flag Coverage Δ
unittests 66.24% <100.00%> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

Co-authored-by: Ben Dichter <ben.dichter@gmail.com>
@CodyCBakerPhD
Copy link
Collaborator

I get a different error now on our photmetry files

ValueError                                Traceback (most recent call last)
File ~/GitHub/nwbwidgets/nwbwidgets/utils/widgets.py:51, in interactive_output.<locals>.observer(change)
     49 with out:
     50     clear_output(wait=True)
---> 51     plot = f(**fixed, **unpack_controls(controls, process_controls))
     52     plt.show()

File ~/GitHub/nwbwidgets/nwbwidgets/timeseries.py:513, in plot_grouped_traces(time_series, time_window, order, ax, figsize, group_inds, labels, colors, show_legend, dynamic_table_region_name, window, **kwargs)
    511 if len(order) <= 30:
    512     ax.set_yticks(offsets)
--> 513     ax.set_yticklabels(order)
    514 else:
    515     ax.set_yticks([])

File /opt/conda/lib/python3.10/site-packages/matplotlib/axes/_base.py:74, in _axis_method_wrapper.__set_name__.<locals>.wrapper(self, *args, **kwargs)
     73 def wrapper(self, *args, **kwargs):
---> 74     return get_method(self)(*args, **kwargs)

File /opt/conda/lib/python3.10/site-packages/matplotlib/_api/deprecation.py:297, in rename_parameter.<locals>.wrapper(*args, **kwargs)
    292     warn_deprecated(
    293         since, message=f"The {old!r} parameter of {func.__name__}() "
    294         f"has been renamed {new!r} since Matplotlib {since}; support "
    295         f"for the old name will be dropped %(removal)s.")
    296     kwargs[new] = kwargs.pop(old)
--> 297 return func(*args, **kwargs)

File /opt/conda/lib/python3.10/site-packages/matplotlib/axis.py:1969, in Axis.set_ticklabels(self, labels, minor, fontdict, **kwargs)
   1965 if isinstance(locator, mticker.FixedLocator):
   1966     # Passing [] as a list of labels is often used as a way to
   1967     # remove all tick labels, so only error for > 0 labels
   1968     if len(locator.locs) != len(labels) and len(labels) != 0:
-> 1969         raise ValueError(
   1970             "The number of FixedLocator locations"
   1971             f" ({len(locator.locs)}), usually from a call to"
   1972             " set_ticks, does not match"
   1973             f" the number of labels ({len(labels)}).")
   1974     tickd = {loc: lab for loc, lab in zip(locator.locs, labels)}
   1975     func = functools.partial(self._format_with_dict, tickd)

ValueError: The number of FixedLocator locations (1), usually from a call to set_ticks, does not match the number of labels (2).

Posted the example file on Slack to help debug

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

[Bug]: Acquisition traces fails to show if the rois table is of type FibersTable
3 participants