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INSTALL.md

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Build and Run Instructions

Detailed instructions on how to build and run CFE in three modes (standalone, pseudo, and nextgen frameworks) are provided below. Building CFE requires GCC and CMAKE on your machine.

Clone the repository

git clone https://github.com/NOAA-OWP/cfe
cd cfe
git submodule update --init
mkdir build && cd build

Notes:

  • Before running the following examples, it is recommended to run the unittests tests.
  • All build commands are run within the build directory, and run commands are executed from the cfe directory.

Example 1 (standalone mode)

CFE reads local forcing data (standalone CFE BMI run), potential ET is not included. The example uses CAMELS catchment-87 data. Notation: BASE

Build

cmake ../ -DBASE=ON
make && cd ..

Run

Run: ./run_cfe.sh BASE

Example 2 (pseudo framework mode)

This example couples CFE with AORC. AORC reads the forcing data and passes rain precipitation to CFE using BMI, potential ET is not included. The example uses CAMELS catchment-87 data. Notation: FORCING

Build

cmake ../ -DFORCING=ON
make && cd ..

Run

Run: ./run_cfe.sh FORCING

Example 3 (pseudo framework mode)

This example couples CFE with AORC and PET. AORC reads the forcing data and passes data to CFE and PET using BMIs. The actual ET is extracted directly from precipitation and from the soil using the Budyko function. The example uses CAMELS catchment-87 data. Notation: FORCINGPET

Build

cmake ../ -DFORCINGPET=ON
make && cd ..

Run

Run: ./run_cfe.sh FORCINGPET

Example 4 (pseudo framework mode)

The setup of this example is identical to example #3, however, actual ET is computed using a rootzone-based scheme. The example requires CFE coupling with SoilMoistureProfiles module which provides a one-dimensional soil moisture profile that is used to estimate actual evapotranspiration (AET) from the deepest rootzone layer. Notation: AETROOTZONE

Clone SoilMoistureProfiles repo:

git clone https://github.com/NOAA-OWP/SoilMoistureProfiles extern/SoilMoistureProfiles (from cfe directory)

Build

cmake ../ -DAETROOTZONE=ON
make && cd ..

Run

Run: ./run_cfe.sh AETROOTZONE

Example 5 (nextgen framework mode)

This example couples CFE with PET. Nextgen framework reads the forcing data and passes data to CFE and PET using BMIs. The example uses CAMELS catchment-87 data. (Notation: NGEN)

Build

See general instructions here or here to build and run models in the ngen framework.

  • Specific instructions for building nextgen and models needed for the example here

  • git clone https://github.com/noaa-owp/ngen && cd ngen
  • git submodule update --init --recursive

  • fortran bmi

    • cmake -B extern/iso_c_fortran_bmi/cmake_build -S extern/iso_c_fortran_bmi
    • make -C extern/iso_c_fortran_bmi/cmake_build

  • build ngen

    • cmake -B cmake_build -S . -DBMI_C_LIB_ACTIVE=ON -DBMI_FORTRAN_ACTIVE=ON -DNGEN_ACTIVATE_PYTHON=ON
    • make -j4 -C cmake_build

  • CFE

    • git submodule update --remote extern/cfe/cfe
    • cmake -B extern/cfe/cmake_build -S extern/cfe/cfe/ -DNGEN=ON
    • make -C extern/cfe/cmake_build

  • SLoTH

    SLoTH is also needed to run SFT in the ngen framework. SLoTH is a BMI that is used to set a bmi variable(s) that is not provided by other BMIs but required by the model. So build SLoTH using the following instructions
    • cd extern/sloth/ && git checkout latest
    • git submodule update --init --recursive
    • cd ../..
    • cmake -B extern/sloth/cmake_build -S extern/sloth/
    • make -C extern/sloth/cmake_build

Run

The following pre-process step needs to be completed before running the example.

Pre-process step

mkdir cfe && cd cfe
ln -s ../extern
ln -s ../data
ln -s ./extern/cfe/cfe/realizations

Note: Make sure the "library_file" and "init_config" in the BMI blocks in the realization file are pointing to the right files, these paths depend on how you build your models.

Run: ../cmake_build/ngen data/catchment_data.geojson cat-27 data/nexus_data.geojson nex-26 realizations/realization_cfe_pet.json

Alternative: Compiling and Running CFE

Example 1. Read local forcing file

To compile and run CFE with locally read forcing data, run the following from the command line:

  1. gcc -lm -Iinclude ./src/main.c ./src/cfe.c ./src/bmi_cfe.c ./src/giuh.c ./src/conceptual_reservoir.c -o cfe_base. This will generate an executable called cfe_base.
  2. Then run the model with example forcing data: ./cfe_base ./configs/cat_58_bmi_config_cfe.txt

Example 2. CFE Model gets forcings passed from BMI

CFE was designed to read its own forcing file, but we have added an option to get forcings passed in through BMI using its set_value functionality. To demonstrate this functionality we have included the BMI-enabled AORC forcing read module. Follow the steps below:

  1. gcc -lm -Iinclude ./src/main_pass_forcings.c ./src/cfe.c ./src/bmi_cfe.c ./src/giuh.c ./src/conceptual_reservoir.c . ./extern/aorc_bmi/src/aorc.c ./extern/aorc_bmi/src/bmi_aorc.c -o cfe_forcing. This generates an executable called cfe_forcing.

  2. To run this executable you must pass the path to the corresponding configuration files for BOTH CFE and AORC (in that order): ./cfe_forcing ./configs/cat_89_bmi_config_cfe_pass.txt ./configs/cat_89_bmi_config_aorc.txt

Example 3. CFE Model gets forcings AND potential evapotranspiration passed from BMI

CFE can remove mass from the modeled system through evapotranspiration (directly from precipitation and from the soil using the Budyko function). Follow the steps below:

  1. gcc -lm -Iinclude ./src/main_cfe_aorc_pet.c ./extern/evapotranspiration/src/pet.c ./extern/evapotranspiration/src/bmi_pet.c ./src/cfe.c ./src/bmi_cfe.c ./src/giuh.c ./src/conceptual_reservoir.c ./extern/aorc_bmi/src/aorc.c ./extern/aorc_bmi/src/bmi_aorc.c -o cfe_forcingpet. This generates an executable called cfe_forcingpet.

  2. To run this executable you must pass the path to the corresponding configuration files for CFE, PET and AORC (in that order): ./cfe_forcingpet ./configs/cat_89_bmi_config_cfe_pass.txt ./configs/cat_89_bmi_config_aorc.txt ./configs/cat_89_bmi_config_pet_pass.txt

Example 4.

CFE rootzone-based example couples C and C++ modules and should be built with cmake, follow the instructions here.

NOTES:

  • The configuration files must be passed in this order: (1) the CFE configuration file, (2) the forcing configuration file, (3) the potential evapotranspiration (PET) configuration file, and (4) the soil moisture profile configuration file
  • Original author code. The code includes a full program to read and process atmospheric forcing data, print the model output and check for mass balance closure. This code can be run from the original_author_code directory. This code does not have a BMI implementation.