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From BRATS 2013 dataset to BRATS2013_Syn_Flair_Train_X.npy and “BRATS2013_Syn_Flair_Train_S.npy #56

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chenwang1701 opened this issue Oct 28, 2020 · 0 comments
Open

From BRATS 2013 dataset to BRATS2013_Syn_Flair_Train_X.npy and “BRATS2013_Syn_Flair_Train_S.npy #56

chenwang1701 opened this issue Oct 28, 2020 · 0 comments

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@chenwang1701
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We generated those 2 files ourselves from BRATS 2013 dataset. We use synthetic flair images particularly and saved them with there ground truth masks in numpy files. “BRATS2013_Syn_Flair_Train_X.npy” contains input images and “BRATS2013_Syn_Flair_Train_S.npy” contains segmentation masks only.

Originally posted by @mahfuzmohammad in #12 (comment)

So could you provide the preprocess code? from BRATS 2013 dataset to the images and labels?
@chenwang1701 chenwang1701 changed the title We generated those 2 files ourselves from BRATS 2013 dataset. We use synthetic flair images particularly and saved them with there ground truth masks in numpy files. “BRATS2013_Syn_Flair_Train_X.npy” contains input images and “BRATS2013_Syn_Flair_Train_S.npy” contains segmentation masks only. From BRATS 2013 dataset to BRATS2013_Syn_Flair_Train_X.npy and “BRATS2013_Syn_Flair_Train_S.npy Oct 28, 2020
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