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Workflow hangs on simulate_volume_element_loading task on CSF when ctf used as input #10

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alecdavis1986 opened this issue Feb 4, 2021 · 1 comment
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software-problem For problems with the underlying software, rather than MatFlow

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@alecdavis1986
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Describe the problem
When using ctf as input orientations, workflow submits ok on CSF, but never completes simulate_volume_element_loading task. When using the same workflow but with random orientations as an input, workflow completes just fine.

Expected behavior
Workflow should complete in approximately the same time as when using random orientations.

Output from matflow validate
Loading matflow config from /mnt/iusers01/jf01/mclikad2/.matflow/config.yml
Loading task schemas from 2 file(s)...OK!
Loading software definitions from 2 file(s)...OK!
Loading extensions...
"neper"...(software: "neper") from matflow_neper (version 0.1.3)
"mtex"...(software: "mtex") from matflow_mtex (version 0.1.6)
"formable"...(software: "formable") from matflow_formable (version 0.1.7)
"demo"...(software: "dummy_software") from matflow_demo_extension (version 0.1.2)
"defdap"...(software: "defdap") from matflow_defdap (version 0.1.4)
"damask"...(software: "damask") from matflow_damask (version 0.1.15)
Validating task schemas against loaded extensions...OK! 36/38 schemas are valid.
The following schemas are invalid:
('visualise_volume_element_response', 'VTK', 'damask'): No input map function found for input map that generates file "geom.geom".
('simulate_deformation', 'FE', 'abaqus'): No input map function found for input map that generates file "inputs.inp".

Workflow directory and/or profile location
Please copy the whole workflow directory (that created by matflow go ...) into a shareable location on the CSF or Dropbox. Share a link or CSF path to that location here.

/mnt/eps01-rds/Fonseca-Lightform/shared/matflow-debugging/Alec/

If the profile YAML file does not run, please just share the profile file.

MatFlow and extension package versions
If your problem is on the CSF, please paste below the output from the following commands on the CSF:

module load apps/anaconda3/5.2.0/bin
pip list --user | grep "matflow\|damask\|formable"

No output given from CSF after running commands...

If your problem is on your local computer, please paste below the output from the following command on your local computer:

  • For a Mac or Linux computer: pip list | grep "matflow\|damask\|formable"
  • For a Windows computer: pip list | findstr "matflow damask formable"
@alecdavis1986 alecdavis1986 added the workflow-problem General issues with workflows for which the precise problem has not yet been determined label Feb 4, 2021
@aplowman aplowman added software-problem For problems with the underlying software, rather than MatFlow and removed workflow-problem General issues with workflows for which the precise problem has not yet been determined labels Feb 11, 2021
@aplowman
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This is a problem with DAMASK. Let's keep the issue open for now.

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Labels
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